Gene detail

Detail information of Am04G008450.1 Annotation

Gene ID	Annotation
Am04G008450.1	acyl activating enzyme 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G008450.1	mRNA	Chr04	23676461	23681930	+

Sequences

CDS:

>Am04G008450.1
ATGGGAGATGAAGACCCGATTGAGTGGTCTACAGAGCAAGTACCTTCGTCCCCAATCGACTTCCTCAAACGAGCAGCTACTATCTATGGTGATAAAGTATCTATCATCTACAATGATCACGTGAGATTTTCATGGAGAGAAACCTATGAAAGATGTGTCAAAATTGCTTCTGCTTTGGTCAACTTGGGAATTTCTCAAGGCGATGTTGTAGCTGTTTTTGCACCAAATATTCCAGAACAGTATGAGCTTCATTTTGGTGTACCTATGGCAGGTGCTACTATATCAGCACTCAACACCAAATTAGATGCAACAACATTGGCACTGATATTGGAACAACTAGAGCCATGCAAGGTAATATTTGTGGAATGTCAATTTCTTGACTCTGCCCTCAAAGCATCAGAAATAATCTCCCAAAGAAAATGCAAACCACCACCCCTCATTGTGCTAATTCCAGATTATGACCAAAAACAAGACACCCCACCAGGTACATTAAACTACAATGAATTTCTTGCAAAGGGAAAATCAGATTTTAATTTCAAGATTTCAATTTCTAGCAATGAAAGTGAACCCATATCAGTGAATTACACATCAGGTTCCACAGGAACTCCTAAAGGAGCTGTTTATAGTCATAAAAGGGCTTATCTTAATTCACTAGCAGCAATTGATCGTTTTAACATGAAACCTACGACGGTGTTCTTATGGACAGTCGACATGTTTCGTTGCGACGGATGGTGTTTCATTTGGGCAATGGCTGCACTTGGTGGCACTAATATTTGTCTCAGAAATGTATCAGCAAAAGATATATTTGATGCAATTCAAATTCACAAGGTGACTCATTTTTGTGGTGCACCAACACTTTTGGAAATCATTGCAAATGCATCATCATGTGACCAAATTTTTTTGCCTCATAAGGTTAGTGTCACAGTTGCTGGTATATTACCACCATATAAAGTTATCAATAAAGTGACAGAGCTTGGATTTGATGTGAACATAGGATATGGTATGACAGAAGTACTAGGTCCAGTGATTATAAGACCATGGAAACCTAATTCAGATAATGATATTACAAAGTTTAATTATGGTGAAGGTAAAGACTTTATGATGCCAGAAATTGATGTGAAAGATTCAAAAACAATGAAGAGTATTCCTCGTGATGGGTTCAGCATAGGTGAAATTATGTTCAAAGGGGATACTCTTATGTTAAGGTACCTTAGTTCACAAGCAACTGAAGAAGCTTTTAAGGATGGATGGTATAGAACTGGGGATTTAGCTGTTAGAGAAATTAATGGTTCATTCACTTTGAAAGATAGAGAAAAAGATATTATTTATTCAAAGGGAGGGGTTGTGAGTTCATTAGAGGTTGAAGCAGTGTTGTTGAATCATCCTAAGGTTTTGAAAGTAGCTGTTGTGGGGATATGTGATGAGTCACTTTGTGCAATTGTTAAGTTGAAAGATGGATGTAGTGCTACTGTTGAAGATATTATAAGGTTTTGTGAAGATCATTTGGATAGTCATATGGTTCCTAAGAATGTGGTTTTTGGAGATTTGCCTGTTAATTCAACTGGGAAGGTACAGAAATTTCTTATAAGGGAAATGATCAAAAGTGATGATGAGGGGAATGACTCAATTAATTAG

Protein:

Promoter(3k):

>AM04G008450.1
TAATAGTATCTTTATGACCTTCTGCATTTAAATGAATTTCAGCATCTAGAGCCCATGGCAAGTAATTCTTTCCCGAAATGTCAAGAGCCTCAAAATCAAGTTTCGTAAGGTTCGACATATTTAGAACTATCATGAAAATATAAGATTTAATCAAGTTAGATACAATACAAGATTAAGAAGAAAAATTGGCCAATGGTGTACGAAAATAAAAATGAAATCCAAACAATTAAGCTCTTCAATAATTCTTGAATGTAGATAGATAGTACATAAAAAAATAAACATAAAATTGAATTAAAAAGAAATAAAAGAACAATTCTTAAAAATAAATAATCCTTTCATCTTCTTCCAAAATAAATAAATAAATAAACATAAAATTGAATTAAAAAGAAATGATGACAATAAAAGAAGGAAGCTACAATGAATTTGATATGAAAGATGTAAATTAGCGTATTTTTATATCGGTTCGGGAGGCAACCGTTGTAAATATTGTAAAAATAATTACAAAACTGCCACCGCGTCATTTCTAACATCAGGTAATTTTTAACCGATATGAATTACTGATATAAAATGCATTTTTTCCACTAGTGCATATATTGTATATCAGATTAAGAATTAAGGAAGACAATAGTATATGTCCAGTATATGTACAGTATATGAATCTAATCATGCACAATATTAATAACTTATCTGATCACATGGATCAATAACTGTCCAGCAAACACTACTACATATGATCAGATATTGATGCACAGCAAACATATATTGACTATTCACATATAAAGTATATATATGTAGTAGTTGTACAATGAATCTAATCACATATATGAATCTCTTCAGATCAATATCAATATATCAAGTTTCAATTATTCTTCCTTATATTGAGGTTTAAGGAAGGAAGACAAAATCCACAGGTAAAAGCCAAGCAATTGTATCACCAGTTGCCTATCTCTTCAATTATCATCCTAAAGGTTCTTTAGTTTCATATGAGAGGTTCTTTAGTTAACACAACCAAATATCACATTTCGGGTTATGGGAGGACTAACACTGTTGACAACCCAAAAAAAATGAAAGCCAACTTTTTCATCAATTAACAACCAATATAGATGAAGAGAGAAAAGAACTAAGCATACGCCAATACGCTAATAGAGTTGATCATATATCAATACATATAATTGAGTTTATAAAAAAGGGATGGAGACAAAACTTACCTTAGGATGTTGGAGTCTCGGCTAATAACGTGTTATAGAATAATCAAAACTATAGCAAACAAAAAATGAGAGAATTTGGGAGTCTTTGTATTTCTCTTCACAAGTACAACATTTCACATATGGGTGAACCCTATTTATAATAAGGTGGAAGATTGGTAAGTGAGTGGTTTATAATAAAAGACCACTATACTAGAGAGTAATGAAAAGAAGTGAGAAGGGTGGTGGACATCCACTAAAATATTCATAACAAAAAGATCTATGTTATCAATTACAAATCTTGTATTATTTTTTCCATTTTAATTACAGATCACGTAAGATTTTAAAAGATTACATGAGATTTTTGAAATTAATTATGTAACAGGAATCATTTTGATTTTAATCTAACGATAATAATAATTAAACATTTTTTATTAAAAACTAGTAGGATACACGTGCATCCATAGGTGCTATCTTGTTCTTTTTATGAATGAACTTAAACAGTATTTAAATAGTCTAAACACTATCCCGTGAATATAAAGACAAATTTAAAGTAGATAAAAAATAACTGTTAAGCCTTCTTGTTTTTTAGATAGTAGGTTAATTTATAGTAGTCTTTATAATTATCAATGACAAATATTAATCCCGTGTTTTTTTATATATCACTGCACTTATCCCGTGTTTTTTATATATCAGTGCAGTTATCTCGTAGTTTCAATTGATTATTTTAGTTAATTAGTAGATTACAGTAGATAGTAAAAGTTAGATAGTAGATTATCAATAAGAAATATTTGTTTTAAGTATTAATTAGTAGTTTAAATAGTCATTAAGTCGTCTTGTTTTTTAGATAATAGGTTTGTAGTAGTAGTCTTCAAAATTTTTAATTATCAATGACAAATATTAATCTCGTGTTTTTTTATATATCACTGCAGTTATCTCGTAGTTTCAATTGATTATTTTAGTTTATTAATAGATTATAGGCGATAGTAAAAGGGAGATAGTAGATTATCAATAAGAAATATTTGTTCTAAATATTAATCGGTAGTTTAAACAGTCATTAAATTTTCTTGTTTTTTAGATAGTAGGTTTGTAGTAGTCTTCAAAAAATTTAATTATCAATGACAAATATTAAGCGTGTGTTTTTTTATATACCAGTGCAGTTATCCCGTGTTTTTTTTATATATCATTGCAGTTATCTCGTAGTTTCAATTGATTATTTTAGTTGACTAGTAGATTATAGTAGATATTAAAAGATAGATAGTAGATTATCAATAAGAGGTGATAATAGACTATCAATAAGAGTGTAAACAGATTTCAGAGAGAAAAATTAAAATTTTAAGGTCATAATTTTTTTCCAAATAGGTGATAGTTTTTTTTTTGTTTTTTAGTGTGACTCGTTTACATTTTTATATGTAATTTTAGTAGAATAGTGTTTGTATAAATTTAGAAATTTAGTTAAAAAAACTAAAGTGAAGTGATAAGAGAAATAGAAGAATTGTTTATGGGAAAAGTAAGAGTAAAGTAAAAAGAAAAAAAGAAAGAAAGAGAGTGTAAGAGAAAAGTAAAAAGGACGAAAGAAAGAGAAAAAAAAGGAAGAAAAAGAGTGTAAGAAGAAAAAAAAAAAAAAATGGTAATGACATTTTTATCCTTAAATGAGATATGTGTCTTGTTAATAAGAGATCCAAATTGATAATTTCATAGTAATAAATTCTAGCATTATATCTTCCCTATATATAGAGAGAGATCATAGACACACATATAATTAACTCAGAGGCTATGTATCTTTAGTTCTTATAGAATCATTGAGGAGGTTACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00501.31	AMP-binding	23	443	1.70E-74
PF13193.9	AMP-binding_C	453	523	1.20E-12

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0016207	4-coumarate-CoA ligase activity	Molecular Function
GO:0009698	phenylpropanoid metabolic process	Biological Process
GO:0016020	membrane	Cellular Component
GO:0106290	trans-cinnamate-CoA ligase activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR042099	ANL, N-terminal domain
IPR000873	AMP-dependent synthetase/ligase domain
IPR020845	AMP-binding, conserved site
IPR045851	AMP-binding enzyme, C-terminal domain superfamily
IPR025110	AMP-binding enzyme, C-terminal domain

trEMBL

trEMBL term	Description
A0AAN9K073	_

SwissProt

SwissProt term	Description
AAE1_ARATH	Butanoate--CoA ligase AAE1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G20560	acyl activating enzyme 1
Medicago sativa L.	MsG0580024312.01.T01	_
Oryza sativa L.	LOC_Os03g04120.1	AMP-binding enzyme, putative, expressed
Cucumis sativus L.	Csa014815	_
Glycyrrhiza uralensis Fisch.	Glyur000221s00012489.1	_
Codonopsis lanceolata	Cl_chr01_31880T	_
Arachis hypogaea L.	AH05G02140.1	Probable acyl-activating enzyme 1, peroxisomal like

Expression pattern