Gene detail

Detail information of Am04G007890.1 Annotation

Gene ID	Annotation
Am04G007890.1	histidine kinase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G007890.1	mRNA	Chr04	22258615	22265489	+

Sequences

CDS:

>Am04G007890.1
ATGTCAGAAAACAAAGACAAACTCTGTTTAGGAAGTTCTGTATGTTCAGCAACTTCAAACTCCCCAATGGGTAATAAGTGCAGATACATGTTTAATAGATTATCTAGTTTTGTCACTTCATTGAAGAAAAGTAGCAAACCAAGAGGACAAAGAATTTTCCACAGGGATGTAGAAAAAGAAGAATTCCAATATGCTAGTAGTCATTGTCTTTCATCTTACTACAGTGTCTTTGTGGTTCGATTAGCAATCATGGTAATGCTAGCTATCTTGATAGGGCTGCTAACCATACTAACATGGCATTTCACAAAGATTTATACAGCAAAATCACTTAATAGTTTGGCATATGGTCTGCGTTATGAACTTCTGCAACGTCCAATTCTGCGTATGTGGAATATTTTGAATTCTACTGCTGAAATTACAACAGCTCAAGTCAAGTTGTCTGAGTATGTAATCAGACGTCACAGCACCCCGGTGACTCAAGCAGAACAAGTTGAGTTGTATGAAGCAATGAAGGCAGTAACATGGGCACTGTTTTCTAGTAAGAAAGCTCTCAACTCAATAACAATCAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTGAAGGATAACAATACATTTTACATCTACTCTGATCTTTCAAACTATTCCATGGTTGCAAGCAGCTCTAACGTGGTAAATTCCCTTTCAACACATCAAGCATGGGATGACAAAGCCATTCATAGTAACTTTTCCGCAATTTGGTACCGCGAACCACTCGATCCTGTCACTGGTGAGAAAATTGGAAAAGCCATGAAAATTTCACCTGAAGACTTGATCAATATAGCTGGCCTTTCTCAAGTGCCTGATGGGGTAGCTACATGGCATGTTGCTGTAAGCAAGTACACAGATTCACCATTGCTTTCAGCAGCATTGCCAGTTTGGGATTCTTCTAATAAAAGTATTATGGCAGTTGTTGGTGTCACAACTGCACTTTATAGTGTAGGACAGTTAATGAGGGAACTAGTTGAGATGCACAGTGGTCACATGTATTTGACATCTCAACAGGGTTACTTATTGGCTACTTCCACAAGTGGACCTCTGTTGACAAATTCAACAAAGCCTCCTAAGCTTAAGATGGCTGTTGATTGTGAAGATAATGTAATAAGACTTGGAGCTGAGTGGTTACAGAAAACTTATGGAAACCATTTTCCTTCAACTCATGAAGTTCATGTAGAGAATGCCAAACTAGGCCATCAGCAATATTACATTGACTCATTCTTCCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATCATCATACCAAGAAAGTACATCATGGGGCAAGTAGATGAGAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCAGCATTATGTATATTAGTCATTGGATGTGTTTGCATCTTGATATTGACTAATGGAGTGTCAAAGGAAATGAATCTAAGAGCAGAACTGATAAGTCAATTGGAAGCAAGAAGGAGGGCAGAGGCATCAAGCAACTATAAAAGCCAGTTCCTTGCAAACATGAGTCATGAACTGAGGACACCTATGGCAGCAGTAATTGGATTGCTTGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGCTCAACAGCTCTGCTTCGCCTTCTTAACAACATATTGGATTTGAGCAAGGTGGAGTCTGGAAAACTGGTATTAGAAGTTGCAGAATTTGACTTGGGACGCGAACTTGAAGGGCTTGTAGATATGTTTTCTGTCCAGTGCATTAACCACAATGTAGAGACTGTTTTAGACCTTTCTGATGATATGCCAAAGGTAGTTCGGGGTGATTCTGCTAGGGTGGTTCAAATATTTGCAAATTTGATCAACAATTCAATTAAGTTTACTACATCGGGTCATGTTATTCTGCGAGGATGGTGTGAAAACCTGAATTCATGCAGTGTTGGTCTGAATTATTTTCTTGACCAGAAGAAATCACGGAGTTTACAAAAGAGCAGAGAGAAGCCAAATGCAAATCACACAAAGAGAACATCTATGACAGATAACAGAGTGATACTTTGGTTTGAAGTTGATGACACAGGCATTGGTATTGACCCATGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGACTGCATGGAGGCACTGGTCTTGGTCTTTGCATTGTGAGGAACTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTGTGAAAAAGGAGGGTCCAGGAACATTGATGCGATTATGCTTGCTTCTCAGTGCACCCATGGATGTCACAGAACAACATTGTGAAATAGATTTGATAGATAATGGCTTAGTGGTACTGCTTGCACTGCACGGAAATATGGGTCGATTAATAACATCCAAGTGGTTACAGAAAAAGGGGGTGTGCACGATGGAAGCATCTGAATGGAATGGACTAACTCAAACTTTGAGGGAACTCTTTCATGCAAGAAGTTCACTCCATAATAATGACTTTGATCCACACTATCCAATAAATGAGGGGCTAAAGTCTAAACTACTAACCATAAAAGATATGAGGAACCCGGTTTTTGTCATTGTTGTTGACATTGGTTTACTTGACTTGAGCACAGACATATGGAAGGAACAGCTTAACTTCCTTCACAGGTATTTTGGGAGAGCAAGGTTTGTATGGATGCTGAATCATGACACCTCCAATACCATAAAGATGGAGCTCCGTAGGAAAGGGCATGTACTAATGGTCAACAAACCTCTTTACAAAGCAAAAATGATTCATATTTTCGAAGCTGTTATAAAGGAGAGAAATCTTGAGCTGCAAAAGAAAAACATGACTGCTTCAAGGACCACAATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTGGTCATTTTGAAGCTGCTAGCTCTGATGATTCTGACATATCCGAAAATGTCAGTGGAGATAAACCAATTGTAGAGGTAGCGAGATCCCATAATCAGATGAATAACAGCTTGGTTGGATTAACTGATGAAAATGAATATAAGGAAGAAAATGATTTAAGGAAAGAAGATTCTTGTCAAAGTAGCCCCATATCCAATGATGCCATTAAAGACACCCAACCTAAATCACTGACCACTAAAGGACCATCTTTTCAAACAGAAGCTCAAGATGAAAATTATGAACGTGAGGGAACACATAGGGTCACCGGTTCAAGTAAAGCAATAAATGATAAGAAATGTCTTGAGGGGCTAAGGATTTTGCTTGCAGAAGATACACCAGTACTTCAAAGGGTTGCAACTATAATGCTTGAAAAAATAGGAGCTGCTGTTATTGCTGTAGGTGATGGACAACAGGCAGTAGAGGCTCTCAATTTCATGGTGGGTGCTGAAGATTGTAGAAGGGAGTCTCTCCAGAAGGAAAGAAACACAAGATTCCAAACAGAGATTTTTACTTGCCATCCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGATACGAGGCAACAAAAGCAATAAGGAAATCAGAGGAAGGAACAGGCTTACACATTCCCATTGTTGCTCTAACAGCTCATGCAATGTCTTGTGATGAAGCTAAATGCCTGCAGGTGGGAATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGAAGATGGTATCCACCATTCTTTCACTCACTAAAAGTAAAAGACCATCTTGA

Protein:

>Am04G007890.1
MSENKDKLCLGSSVCSATSNSPMGNKCRYMFNRLSSFVTSLKKSSKPRGQRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTAKSLNSLAYGLRYELLQRPILRMWNILNSTAEITTAQVKLSEYVIRRHSTPVTQAEQVELYEAMKAVTWALFSSKKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVASSSNVVNSLSTHQAWDDKAIHSNFSAIWYREPLDPVTGEKIGKAMKISPEDLINIAGLSQVPDGVATWHVAVSKYTDSPLLSAALPVWDSSNKSIMAVVGVTTALYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTSGPLLTNSTKPPKLKMAVDCEDNVIRLGAEWLQKTYGNHFPSTHEVHVENAKLGHQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISAALCILVIGCVCILILTNGVSKEMNLRAELISQLEARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEVAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTTSGHVILRGWCENLNSCSVGLNYFLDQKKSRSLQKSREKPNANHTKRTSMTDNRVILWFEVDDTGIGIDPCKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVVKKEGPGTLMRLCLLLSAPMDVTEQHCEIDLIDNGLVVLLALHGNMGRLITSKWLQKKGVCTMEASEWNGLTQTLRELFHARSSLHNNDFDPHYPINEGLKSKLLTIKDMRNPVFVIVVDIGLLDLSTDIWKEQLNFLHRYFGRARFVWMLNHDTSNTIKMELRRKGHVLMVNKPLYKAKMIHIFEAVIKERNLELQKKNMTASRTTMKEGDLHEFLEIDSGHFEAASSDDSDISENVSGDKPIVEVARSHNQMNNSLVGLTDENEYKEENDLRKEDSCQSSPISNDAIKDTQPKSLTTKGPSFQTEAQDENYEREGTHRVTGSSKAINDKKCLEGLRILLAEDTPVLQRVATIMLEKIGAAVIAVGDGQQAVEALNFMVGAEDCRRESLQKERNTRFQTEIFTCHPYDLILMDCQMPKMDGYEATKAIRKSEEGTGLHIPIVALTAHAMSCDEAKCLQVGMDAYLTKPIDFKKMVSTILSLTKSKRPS*

Promoter(3k):

>AM04G007890.1
GACTATTACATGTTCACTAGCTTGTTCCATTTTTCATCAACTTAATTTGCAACATTTTTCATTTGAACTTATATATTATAGCATATTATTTTCTTTCTCATTTTATCCCTATTACCTTTTTAAATTCTCATCTAACTTCGACTAAATAAAATAACAAATATGAGCTTCTCTCTTTCTCTCTCATTATATACATTCACGTTGTTACATACTACTATGGTCTCGTTTATAATATAAAAAAAAACACTTTTTATGTTCATCTGTATCTGGTCTATATTATAGACCAAATACATCAGTTATTCAATGAATCTAAAAAGAGTTTTTTTTGGTTGATAAACGAGACTGGAGGGAGTATATTTTTATAATCCTACGATAAGTCAGAGTGAAGCACGACGCACCACCTATTAAGTAGTGCATCTTAGAATTCATCTTCACCTTATCCCTTTTGTAAAAGAAATAGAAAGAAAGAGCTTAATGCACTAAATGTACTCTTTGGGGGGAAGAAACAAGGGGCAAAAAGAGTTTATTGAATAGGTAAGTGTACCACTTGTTTGTATTTTAACGACAAGGGTTTATGTATGATATTATATCTTTTTAGGTCATATCTTTTAGCCATGCAATGGAAATGGAATACAGTGGACAATTTTTGGCACAAAGCAGTTCAAAACTTTTCCCACTATTTACCATTAAAAAGGACTTAATCCACAGCTTAGTGCTTATTTCGTTTTCTAAAGCCTCAACTAGAAGGGATTAATGTGGATTATTGAGTTGGAGCACAAAAGTTGTATTCTAGAGGCTATAATTCAGCCAAGTCAAAGACAACCAAGTGCACGCCTAATAGGCCCACACTCATCACCTAAGATTTGTTTTAACAGCCACCTTCCCATCCATGCTTCTAAATTTTGTGATCAGAATTAGATCATCTATTTATTTATTTATTAATTAACAGCTACCACCACTTCATAAAAAATATATATTGTAGACCCTTTTGGTTTACTCTCATTGACATCATTTGCATATTTTTTTTTTGGTTTTACCCAGGGTATCCACCGCCGACCGCAGTGACTAATCCCCTCATTGAATTGTAGCTGTCTCGAGGGGCAAGACAGCTAGCCCAAAATTTTAACGCTGCTTCGTACCCTTGTATAACTTTTATTACTAGTAACTAGTATAATTAGTGACCGACACTAATTCAGCAATATATAGACTTTTTTATAAATGATGTCATTAAATAAGGTCATGTTTGCCATCTTTTATTATTACTAGTAATTACTCTTGTAAATGATATCATTAAACAAGGTAAAATTAATTAAAATTTATTTATATTTTAAACCACCAAACATGACTTTTTAAAATTAATTACATATCACGAGCAACCATTTTCTTTTATTTTTTTTTTTATGAAATGCGACTAAAAGATGATTATTAAAAATAAAGAAAACAAACATTTCTTAATTTTCAAATCAAATATACATCCTACAATTTTTTAAAATACATGTTTGCCATACATATAATCAATTATTTAAGATGGACGCTATCTCCGGAGCTTCTTCCGCCGCCACTTGGACGCTATGGACTCATTGGCCTCCAAAAGTCTCATCTCTCCTTCTTGCGGATTCCATAGGAGTGGAGAGAGTTAGGGAATAGTTGTTGTGGTTGTTTTGTTTATGTCTTTCCATTGAGCAAAAAAGTTATTCAAGATGAATGAATCAAAACGATGTATTGATGAAAAAGCTATAACTCATTAAAATCTTTTAATATCATTTTATACGAGCGAGCTTCATGATTATAGCTATGGAAAATGCACGGCTACTTTTCTCCATTGTCAAACCGTCAAGAAAGAAAAGCTTATATTAATTTCCTCCCACAAGATTTTCCGATCCCAAGACGTGATTCCTAAGGGAGGAACAATCATTGCTTCCTACCAATGAGTCAATGACAGAGGCCTTCTCCTTCTTCACTTCAGATTTACACGTCGCAGTAAGTTCATTGAATTGAATTTGATCAAGATTATTATTCCCTTTGGGACAAGACAGAAAATTCGGTTCTAAATTATACTGTTTGTATGTTAGTTGCTCAGTGGCTCTTTGTTTGACGTCTAAGCTCTGATACAAATACTAAGAAGTGAGTAGTCATCCATGTTTCACATCGTGTAGTGTGAAGGAAAAAAAAAAAGTAGAGATTATTATAAATACGAAGAGTTAATTAGTTTGAGTTTTTTAATACGTATACATCGTTAGTGTAAATATATATTTTACATATATATATATATATATATATATATATATATATATATATATATATATATATATCCAAATCCAATGATGTATTATTATACCATTTAGCAAGTAGGACAAATCATGTATTTTTAAACACATTCTATGGATTGCCAGGTAAAATATTTATACTATATAAAACTAAACTGTTTGATTAAAACTCATCAACCGATCCATTGTTTCTTATAGAAGAGTAGAAGAAGAACCACAGTGCTTATAACTACCCTATGTCAATGTGATATTTTGTTTTTCTTTCAAAAAAATTCACATCAGAGTATAGTATAGTATAGTATCCATATACAAATGCATTTATTTGAATTTGTACAATCTTTAGAGGTAGTAGCTGTGGTTCAAACGATGCCGGTGGTCGAAATGGGCCAATCCATGGGTGGCAATGCAGCATCCGATCAAAGCTATTAGCATCTTGAATATGGAATAAAACACCCCCACTTAAATAAAACCAACCTCTTGGTGCTAGTGCGCATTGACACATCAATATAAATAGTAATTACAATACTTTAGTATCATTTAAATACTTTATCCTTCTACAATTTTATTGTATCAAGAATAACACAGTATATACAAATATACATATTAACATATATATAAAATACTAAAAAGTATAATGACTTCTGTGTCTGACACGAAGGTATTAAAATATACTAAACAAGAAGGAACCTCTCCTTTGATGAGTTAGTTTATAAGCTCATAGATTCAGCAGTGAGTT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02518.29	HATPase_c	618	768	2.40E-21
PF00072.27	Response_reg	1154	1231	5.50E-21
PF00512.28	HisKA	506	571	3.70E-15

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0000160	phosphorelay signal transduction system	Biological Process
GO:0016020	membrane	Cellular Component
GO:0019773	proteasome core complex, alpha-subunit complex	Cellular Component
GO:0046872	metal ion binding	Molecular Function
GO:0051603	proteolysis involved in protein catabolic process	Biological Process

InterPro

InterPro term	Description
IPR001789	Signal transduction response regulator, receiver domain
IPR004358	Signal transduction histidine kinase-related protein, C-terminal
IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily
IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR036890	Histidine kinase/HSP90-like ATPase superfamily
IPR003594	Histidine kinase/HSP90-like ATPase
IPR005467	Histidine kinase domain
IPR011006	CheY-like superfamily

trEMBL

trEMBL term	Description
A0AAN9K3N8	_

SwissProt

SwissProt term	Description
AHK1_ARATH	Histidine kinase 1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G17820	histidine kinase 1
Medicago sativa L.	MsG0580025117.01.T01	_
Oryza sativa L.	LOC_Os01g69920.2	histidine kinase, putative, expressed
Cucumis sativus L.	Csa015738	_
Glycyrrhiza uralensis Fisch.	Glyur000232s00013761.1	_
Codonopsis lanceolata	Cl_chr03_25770T	_
Arachis hypogaea L.	AH05G02830.2	Histidine kinase 1 like

Expression pattern