Gene detail

Detail information of Am04G007600.1 Annotation

Gene ID	Annotation
Am04G007600.1	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G007600.1	mRNA	Chr04	21280173	21282259	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM04G007600.1
TTAATTTATTTACGTAGCCTTCTTAGTTTAATTTATTTACATAGCCTTATTTTTTTTTATAATACAGACATATGAGCGTAAATTGAAGGTTACCAACCATGGTAACAAGCTGGCTCAGAGACTCTTACGGGTTGCATCACCACCACCACCACCACCACCAGTACAGCCAGCTGCACCACCAGTCACTACAAGAATTACTTGCATTACTGGCTAGACATTTCTGGCGGAATCAGTCAGCCAGTAAGTTTTTTGGTGGAATTATGCGATTTCTGGCGGATTTAGTCTTCCAGTAAGTTTCTGGCGGATTCCATAACATTTCTGTCGAATTTAAACAGCCAGTATATTTACTGGCGGATTGAGTAGGAATTTCTGGCGGAAATTAATTGAAAAACTAAAATAATTTTATAAATAATTATATCCGCCAGTAATTGCATTTACTGGCGGAAATTTCAGTCAGAAAATACCCTCAAAAGCTGCGCATTGACTGTCAAAAATGGCCAGTAATGCAGTTCCGCCAGTAACACGCATGTTCCGCCAGTAACGCAGTTCAGCCAGTAACAGGAAATTTCCGCCAGTAACATATCCGTCAGTAAATGCATTTACTGGCGGAAATTTCAGCCAGTAACATACCCTCAAAAGTTGTGCGTTGACCATTAAAAATGGCCAGTAATGACATCCGCCAGTAACACGCAAAATTCCGCCAGTAATCACTCTCTCCACCTTTTCATCCGTGCCAGCTTTTCATCTCTCTCTCCACCTTTAATCACTCTCATCTCATTTCATTTTTTCATCTCTCATCACCACCAACCTTCATTTCTTCATTTCTCATCACCATCAACCTTCATTTCTCATCACCACCAAAACCTCCACAACAACAACAGCAGAGCCACCACCTTCGCACACCCTCCTTTCTCTCTCATCACCGCGGGCCACAATTCCTCTCTCTCTCACCACCGCTAAACCACCATGAACCACCACCACAGAACACTATCACCCTTCTTTTATACACAGCACCCTTCTTTTATTTTTAAACTCAGAACACTATCCACACCCCTCTGGTTTTAACAATACAACCCCTACAACCACACAACCACCCCAAAACCACACCGGAGGGTCGCCGGAGCACCGTCGTCGCCGCCTCTGCCAGGAAGACTTTGGTTCTCACTTTGCTTCAAACAACAAGCTTTTTAAAAAATTAAATAAAAAAAAGAATTAAATATTTAAAACAACAAATTTTAAATACAAAAAAGCTTTTTAAAAATATTTTTTTAAAAAAATATATAATACATTACTGGCGGAATTTCAGCCAGTAATGACTGGCGGATTTACTGGCCGAATTTCCGCCAGTAATTACTGGCTGAAATTCGGCCAGTAAATCCGCCAGTCATTACTGGCTGAAATTCCGCCAGTAACAATTACCTGCGGCCGTTTTTCTGGCTGATTACTGGCGGACTAAATCCGCCAGTAATGTGCAATTTCTGGCCGAATTTCAGCATTACTGGGGGATTGAGTTAGCCAGTAATAACTTAAATTCTTGTAGTGAGTACAACCAGATTTGCTCGAGATTGTGGAGGAGGAGATTCGGAGGGGGCTTCGGAGCGGAGACATTAGGATGAGTAGTCAGACATACGCTCGCCTCACGCGGTTACTGGATATGCTACCGAGGCGTGACTAGGGGGTTTTGTGGGATTGTATGTTTGAACTATTTTTTTACGACTTGATTCTTAAACTTAACCAACTACAATAACAATAGACAGATACATTTTCCTAAAATTCTGGTCCTCGAACACGGCGTAAAATCTCATTCACACTCCGTTGAGTTTCCACGTACAGCTCCAACGGCTTATACCCCTAAAGCGTGTCATGGATGTTTAACATGTTCGCCACGTCTTCGTCAGTCTTGATTGTCATGGACGAGAAGGAAACGCGGCCATCGTCTCCAAGATAGGGTTTGCGATGAGTGATACTAGTGACGTCACGATCGTCACCAGTTACTTGAACTTTGGACCACATTTTATCCTTCAAACCTTCAAACCCCATGCCGTGGTGGATTCTGCATAACACCGGCTGAGGACTCCAGAAATGGACACCATCTTCTCTCATCGTGATTTGGCCCCGATGATGTATACCGCAAAGCCTATTGTCATCTGAGCGTTGAGTGAGGCATATCTCCATTTTGGATGAGTGAAATAAGTAAGTGAGCGTGAATTTTTTTGAGTGAAAAGAATGAGGTTGGCAATGGGTATTTATAGAATTTGTCAATGATTATCAACCGTTGATATTGTCGGTGCAATCTACATCGTTGATCAACATTGGCAGTCAAATCCTATCTGTCGAATTTAGTACAAATCAGATTTACCTATCAGGGAGGTAAATCTGATTTGCATTTTAACAAAGCGGACATACCCCCACTGATAGGTATATCCGCTTTGTTAATTGCAAAGCGGATTTACCTATCAGGGAGGTAAATCCGATTTGCATTTTAACAAAGCGGACATACCCCCACTGATAGGTATATCCGCTTTTATATTTTAACAAATCGGATCTACCTCACTAAAGGTAGATTCGATTTCCCCCCACTAATTCTAATCGGATATACGTAAATCCTCCTTTTATTTTTGTAAATCGGATCTACCTACCTTATATGTAGATCCGATTTAAGTCAATTTAACTAGGGGTGTTTTCGTCTTAAAATTTCTTGTGGGGGTATATAGTGATATGACGGGGGTAAAAAAAACCCAAAATCAAAAGTCTTTCTTACCAAAAGTGTGAGCCCAATACTCTTCTCACATGCACTAACCGGCCCACGATTACGCCATGTGAGTAATATAATAATATTAGCGGGGCTCAAGAAACTTCCTTTTAATCCATAAAAATAAAAATAAAAACAAAAATCTGTGTGTTTGAGAAAGAGAGAAGAGACAGAAGCCAATCATCACATTCATAGATCGAGATCTCTTTCTTCATCCTTTGCTTGAGGTTTTGGTAGAAGAAAAAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00137.24	ATP-synt_C	16	75	1.40E-34
PF00137.24	ATP-synt_C	96	154	1.40E-34

Gene family

Gene family	Subfamily
Transporter family	F-ATPase

Gene Ontology

GO term	Description	Category
GO:1902600	proton transmembrane transport	Biological Process
GO:0005774	vacuolar membrane	Cellular Component
GO:0016787	hydrolase activity	Molecular Function
GO:0000325	plant-type vacuole	Cellular Component
GO:0005886	plasma membrane	Cellular Component

InterPro

InterPro term	Description
IPR002379	V-ATPase proteolipid subunit C-like domain
IPR011555	V-ATPase proteolipid subunit C, eukaryotic
IPR000245	V-ATPase proteolipid subunit
IPR035921	F/V-ATP synthase subunit C superfamily

trEMBL

trEMBL term	Description
A0A2N9IZ77	_

SwissProt

SwissProt term	Description
VATL_VIGRR	V-type proton ATPase 16 kDa proteolipid subunit

KEGG

KO	Description	Enzyme
K02155	V-type H+-transporting ATPase 16kDa proteolipid subunit

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G75630	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4
Medicago sativa L.	MsG0580025061.01.T01	_
Oryza sativa L.	LOC_Os12g07140.1	expressed protein
Cucumis sativus L.	Csa003912	_
Glycyrrhiza uralensis Fisch.	Glyur000744s00021930.1	_
Codonopsis lanceolata	Cl_chr05_46140T	_
Arachis hypogaea L.	AH17G18880.1	V-type proton ATPase subunit c4 like

Expression pattern