| Gene ID | Annotation |
|---|---|
| Am04G007330.1 | Lateral root primordium (LRP) protein-related |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G007330.1 | mRNA | Chr04 | 20159671 | 20161640 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF05142.15 | DUF702 | 108 | 248 | 1.70E-57 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| GO term | Description | Category |
|---|---|---|
| GO:0003700 | DNA-binding transcription factor activity | Molecular Function |
| GO:0005634 | nucleus | Cellular Component |
| GO:0009734 | auxin-activated signaling pathway | Biological Process |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0045893 | positive regulation of DNA-templated transcription | Biological Process |
| InterPro term | Description |
|---|---|
| IPR006510 | Zinc finger, lateral root primordium type 1 |
| IPR006511 | SHORT INTERNODES, C-terminal |
| IPR007818 | SHI protein family |
| trEMBL term | Description |
|---|---|
| V7CMW6 | _ |
| SwissProt term | Description |
|---|---|
| SHI_ARATH | Protein SHORT INTERNODES |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G66350 | Lateral root primordium (LRP) protein-related |
| Medicago sativa L. | MsG0580025028.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g43410.1 | LRP1, putative, expressed |
| Cucumis sativus L. | Csa020675 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000134s00009780.1 | _ |
| Codonopsis lanceolata | Cl_chr03_29280T | _ |
| Arachis hypogaea L. | AH05G07580.1 | Protein SHORT INTERNODES like |