Gene detail

Detail information of Am04G006920.1 Annotation

Gene ID	Annotation
Am04G006920.1	AAA-type ATPase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G006920.1	mRNA	Chr04	18990534	18998190	-

Sequences

CDS:

>Am04G006920.1
ATGGCCGCCGCTAGATTAACCTCATGCGTAGCAGTAACAGCTGCTGCGGTGGCTTCCATGTCCACGACTTCCGATCGTGCTTACGCCGACTCTCTCTTTCGGTTCCCTTTTTTCTCTTCTTCACCTTCCAATTCCCCTTCCCCGACGGACCAGGCATCTGACACCAAGTCGGAGCCTCCGACGCCTGAGGAACCTAAGAAGTCGGGATTTGATCCCGAATCATTGGAAAGAGGTGCTAAAGCTCTCCGTGAAATTAATAGTTCTCCCTACTCTAAACAGGTGTTTGATTTAATGCGGAAACAGGAACAAACTCGCCTTGCTGAGTTAGATGCCGAAAAAGTTCATTTTGAACTTATTCAGTCTCAAGGAGATATAGAAAGACAGCGTAAAATGGCTGAAGAACAACGGAATTTAATACAAGAACAGGCCCAGAGGCAGGCTCAGGTGTTGCGATTTGAAGATGAATTGGCGAGGAAAAGAATGCAGGAAGATCATGAAGTTCAAAGGCGACATAATGTTGAATTGGTCAATATGCAAGAGAAATCTTCTGTAAGAAAGGAGCAGGCCAGACTGGCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAGAAAGAGCGAGCTGAAATAGAAAGAGAAACCATTAGAGTTAAGGAAATGGCAGAGGCTGAAGCCCGAGCCCATGAAGCAAAATTGACTGAGGATCAAAACAGGAGAATGCTTAGAGAACGAATGCAAGGTGAAAGAGATAAATGGCTTGCTGCAATTAACACAACTTTTAGTCATATTGAAGGTGGTCTAAGGGCCTTATTGACCGATAGGGACAAATTGCTTATGACAGTTGGAGGAGCTACTGCATTAGCAGCGGGAGTATATACAACAAGAGAAGGTGCAAAAGTTACCTGGGGATATATTAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAATCGTCCATGGCAAAGTTTCCAGGGTCAAGGATCATGTCTCAAGCCAAAAATAAAGTTTTAAATTATAGTACGGCCAGGTCAGAAAAGACTGCTGGGAATCAAAATGGTCTTGGAAATGTAATCCTCCATCCATCATTGCAGAGAAGAATAACGCATCTTGCTAGGGCAACATCAAATACTAAGGCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGGCCTCCAGGGACTGGTAAAACCATGGTTGCTAGGGAAATAGCTAGAAAATCGGGTTTGGATTATGCAATGATGACTGGTGGAGATGTTGCACCTCTGGGCCCACAGGCTGTTACCAAAATTCATGAGATATTTGATTGGGCCAAGAAATCTAAAAGAGGCCTATTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCTCATACATGAGTGAAGCTCAACGAAGTGCTCTAAATGCGTTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTCCTTGCCACAAACAGACCAGGAGATCTCGATAGTGCAGTTACAGATCGCATTGACGAAGTGATTGAATTCCCGCTTCCAGGAGAGGAGGAAAGGTTTAAGTTATTGAAGCTTTATTTGAACAAATATCTATGTGATGAAAATAATGGTTCTTCCAAGGGGGGCTTCTCGCTGAAGAAGCAGCCCCAAAAGATTACCATAAAAGATTTATCTGAGGATGTGGTCAGAGAAGCTGCCAAGAAAACAGAGGGATTTTCTGGCCGTGAGATAGCCAAACTCATGGCTAGCGTCCAAGCTGCTGTCTATGGGCGCCCTGACTGCACTTTGGATTCCCAATTGTTTAAAGAAATTGTAGATTACAAGGTGGTGGAACATCATCAGCGATTAAAACTGGCAGCTGAAGGCGGCAATGTAACAAATTCCCATTAA

Protein:

Promoter(3k):

>AM04G006920.1
AACAGTTCCTCTACGGTGGATAATTCTCTAGTTTTCTCCGGTGGGTAGATCCCCACCCTTAAATATCACTCCTCTCACTTATTTTTTCAATGGAATGTACAAATTTCATTGAACCATAATCTCATGGGAGAAAATCCCTTCTCAGCATGAGTGTGTGGATCAAAGTAATTGTGCTACTGAGTTTTCATTGAAGCATTTTACTTGCAATTTGTTCTACTTGAACATGGAGATACTAAGCACTTATTCATGACACAAATGGAAATTCCAACTTGTAGAGTGACATTAGTATCTTTGCTTAATTAAACCAATCAAAAAGTGTGTTCTTTGATATTGATTCTCTTCTTCCACTTTGTGAAGATATATTCCGCCACCACACTAGTACTCAATCCCACTAATTATACATTACTTTTCCTTCTATTTATAAAGAGTAATCTTGACGATCTCTATAGCATACCATCCCACAACATAGAGAGTAGTAATATTTTCTTCTCTAAATTAAGCAACCATCATTTTCTCTTCTTTCCTATTTGTAGATTAAAGCCAAACAACATATTGTTCTTCTTGTGTTGTAATTAAAAGCTAGCTTAAGTAATTAAGTTTTAGCTTAAGATGACAGCAACTTGGACACAAAGGCAAAACAAACTATTTGAAGAAGCCCTTGCTATATATGACAGGGAAACACCTGACAGGTGGCAAAATGTTGCAAAAGTGGTGGGAAAATCTGTTGAAGAGGTCAAAAGGCATTATGAGATCCTCATAGAAGATGTCAAGCGCATTGAGCGTGGTCAGGTCTCATTCCCTTATAAATAAAGGTATGGCACACCTATTTCATGCAAAAAGATAATTCAGAAAATATTTTTACTCATTCGAGTGTTGTGACTATTTTAGCATTTTTAGTGAGGAACTTAACCGACTTGACCTAAGTAACATTGACCTTAACGAGGGAGCTTTGGTTCGAATCTCTATAGAGAGAAGTGCCCACATTTAGTGTTCAAGATTCCCTCTAGTGAAGAATACATGAAAAAAGTGCTAACAACACTCTGTTTTACGTGCCCTCTTCAACACTCACTTAATTATGGGTTGAAATTGATGTGGATTCCACTAAAATAATGATACAATTTCCAAAATGCTGGGATCCACATGAATTTTAACAAATCACAAAGCGAGTGTTGGAGAGAGTGCAGAAAGAAAAGTGAGTGTTGCTAGTATTTATAAAAAAATATAGATATGGGAAATAACTTAACGTTAGGAAAAGCCACTCGTATGTCCAAATTATGTATATTAAACTTACAAAGTTGCTATGCTGATGTGATTTTTTAAATGTTTTTGCAGGTTCTTGATTCTTCAACAACTTCGTAAATAAAATCGCCAATAAGGAGTCTAAAGGACTTTGCTTTCTATTTAAACATACGTTATTTCTAGGTTGTATTACCAAATATATCATACGTGTATGATTAGTGTTGGGAAGATATATATATATAGTTCTTGAAAAGTCATAACAATTTTAGTCTCAACAAATAATTATTTGGACAATTTTGATATTTGTTTTTTCCTCAATCCTCTATTAAGTGCTAATAACATGACTAATTGAACATTGCGGTAACACTAACATGTGCGCTAACACTAACATGCAGTCATAGTTTTTTTTTGACAAAAGAAAAACTTAGCTCTTTTTATTAATAATAAAAGTAATACAAGTTAGACTCAAATCAAAAATCTAGGAGTTAGCATAGTCCCTTGAAGCTCTAACTAACATATGAGAATGAAACTACTTTAAAGTTTCTTAAATGTGATAATAATGAAGTACAAACACATATAATAGAGCCAAACTCGGTAACAGAATTACGAATTCCTCCAATGCCATCAACTATCGCTTTGCAAACAAACTCGATGGTAACTATTTGGTATTGCAACAACTGTATCCATTTAATGACTGCCAACAAACCATGTGTCTCTGCTTCTGGAGAAGTAGGAACACCTCCATAGTAGTGGGTTTGCTCCTTCACAAACTCGTCAAAATTATTACGGATACACATATCGATCCCAAAACACCCCTCCTCCGCAAAGAGCGCCGCCTCAACATTTCTGAAAATTTTTAATATTTTTCTTTTGAAAAATATTATTGATAGATTATTTTCTTACCCCCACTGATAAAATTTTCTGGATCTGCCACTGCATCTCATATATGACAATGGTGCTGGTTTAGATATCGCTTATGTAGCTGTCGCCACTTGGCATTCTTATGTAGGAATCTTTTGCTCCATTAGATGTTTCTATGTGCCCTTGCTCGATTCATCTGCAATATATTATTTGCATGTAGAAGCCTTAGATCTCTCGCGTCCAACATGTCCACCCTTCATTCGTGGAAAATCTACTCATTTTTTACAATCAAAGGAAATAACATAAAGTCTTTAACCAAAATAGAGACACTTTTAAAAATTTCAAGGTTTTAGTAGCTTCTAAAAGTAAGCTTCTAGAAGTAAACTATAACTTCACTCTGAAAGCAAAACTCGTGTATACGTAAAATTTAGATTTGAATGCATACTTGCGTATTGTAGCTAAACGTATTTGACATTCTCAAGAATTATACTTCAAGAACTAAAATATATGGGTCCTAAAAGTTACATATGGACTTTTTGTTTTCTTGACTTTTTCTAATAGGTAAATTAGAAGGCAAGAAAACAAGAGTATGAAGTTAGGGAAGTTAAATGCAAAAGTGGGTGTATTAGAAAGAAGGGGGTGCAAATGCAAATAAAATCATCAGGATGAAGGATCCACTGGGAATCGGGTATGCAGGCTGATCTATTTTCCGTGTTCGGCCAATAAACGACAGTCGTTTCAATAGTTTGAATTACTCTCCACGCAACTGCACAACAACCTCTTTCTGAACTTGTTCCCTTTCCCGTTTAAACCCTAGTCTGGGTTTAAGCTCGCGCCACACAGTGAACCGCCAAGATTCTTTTATGATCCATCTCGAAGCCGCATTCTGATTACAAGGCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF12037.11	ATAD3_N	54	317	6.70E-105
PF00004.32	AAA	388	515	1.10E-26

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0007005	mitochondrion organization	Biological Process
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0008270	zinc ion binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR003959	ATPase, AAA-type, core
IPR003960	ATPase, AAA-type, conserved site
IPR021911	ATPase family AAA domain-containing protein 3, N-terminal
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0AA86S702	_

SwissProt

SwissProt term	Description
ATAD3_XENTR	ATPase family AAA domain-containing protein 3

KEGG

KO	Description	Enzyme
K17681	ATPase family AAA domain-containing protein 3A/B

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G18330	AAA-type ATPase family protein
Medicago sativa L.	MsG0580024974.01.T01	_
Oryza sativa L.	LOC_Os02g47760.1	AAA-type ATPase family protein, putative, expressed
Cucumis sativus L.	Csa012027	_
Glycyrrhiza uralensis Fisch.	Glyur001333s00028400.1	_
Codonopsis lanceolata	Cl_chr03_34770T	_
Arachis hypogaea L.	AH05G07070.1	ATPase family AAA domain-containing protein 3 like

Expression pattern