Detail information of Am04G006790.1 Annotation
Gene IDAnnotation
Am04G006790.1 chromatin remodeling 1
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am04G006790.1mRNAChr041838412118389798+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00176.26SNF2-rel_dom1844813.30E-69
PF00271.34Helicase_C5076171.20E-20
PF11496.11HDA2-34306496.20E-08
PF04851.18ResIII1803438.40E-07
Gene family
Gene familySubfamily
Transcription Factors FamilyOthers
Epigenetic RegulatorsCHR1
Transcription Factors FamilySNF2

Gene Ontology
GO termDescriptionCategory
GO:0010629negative regulation of gene expressionBiological Process
GO:0016787hydrolase activityMolecular Function
GO:0003677DNA bindingMolecular Function
GO:0030619U1 snRNA bindingMolecular Function
GO:0004674protein serine/threonine kinase activityMolecular Function

InterPro
InterPro termDescription
IPR038718SNF2-like, N-terminal domain superfamily
IPR000330SNF2, N-terminal
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR001650Helicase, C-terminal
IPR014001Helicase superfamily 1/2, ATP-binding domain

trEMBL
trEMBL termDescription
A0A1S2YYR2 _

SwissProt
SwissProt termDescription
DDM1_ARATHATP-dependent DNA helicase DDM1

KEGG
KODescriptionEnzyme
K19001ATP-dependent DNA helicase

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G66750 chromatin remodeling 1
Medicago sativa L.MsG0580024954.01.T01 _
Oryza sativa L.ChrUn.fgenesh.mRNA.85expressed protein
Cucumis sativus L.Csa019556 _
Glycyrrhiza uralensis Fisch.Glyur000079s00008937.1 _
Codonopsis lanceolataCl_chr03_20380T _
Arachis hypogaea L.AH05G06830.1ATP-dependent DNA helicase DDM1 like

Expression pattern