Detail information of Am04G006560.1 Annotation
Gene IDAnnotation
Am04G006560.1 RUB1 conjugating enzyme 1
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am04G006560.1mRNAChr041775672417761407+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00179.29UQ_con331686.70E-38
Gene family
Gene familySubfamily
Ubiquitin FamilyUBC

Gene Ontology
GO termDescriptionCategory
GO:0005737cytoplasmCellular Component
GO:0016020membraneCellular Component
GO:0016567protein ubiquitinationBiological Process
GO:0004839ubiquitin activating enzyme activityMolecular Function
GO:0008233peptidase activityMolecular Function

InterPro
InterPro termDescription
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR023313Ubiquitin-conjugating enzyme, active site
IPR000608Ubiquitin-conjugating enzyme E2

trEMBL
trEMBL termDescription
C6SV99 _

SwissProt
SwissProt termDescription
RCE1_ARATHNEDD8-conjugating enzyme Ubc12

KEGG
KODescriptionEnzyme
K10579ubiquitin-conjugating enzyme E2 M[EC: 2.3.2.34]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G36800 RUB1 conjugating enzyme 1
Medicago sativa L.MsG0580024928.01.T02 _
Oryza sativa L.LOC_Os10g11260.1ubiquitin-conjugating enzyme, putative, expressed
Cucumis sativus L.Csa010283 _
Glycyrrhiza uralensis Fisch.Glyur000580s00024196.2 _
Codonopsis lanceolataCl_chr02_15400T _
Arachis hypogaea L.AH13G08440.1Ubiquitin-conjugating enzyme E2 28 like

Expression pattern