| Gene ID | Annotation |
|---|---|
| Am04G006390.1 | zinc knuckle (CCHC-type) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G006390.1 | mRNA | Chr04 | 17338407 | 17340875 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF08284.14 | RVP_2 | 312 | 441 | 2.70E-46 |
| PF00078.30 | RVT_1 | 593 | 683 | 4.60E-22 |
| PF03732.20 | Retrotrans_gag | 72 | 170 | 2.90E-12 |
| PF00098.26 | zf-CCHC | 281 | 295 | 1.50E-11 |
| PF13975.9 | gag-asp_proteas | 336 | 425 | 7.00E-08 |
| PF19259.2 | Ty3_capsid | 34 | 202 | 1.80E-07 |
| PF13650.9 | Asp_protease_2 | 336 | 423 | 4.20E-07 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0008270 | zinc ion binding | Molecular Function |
| GO:0015074 | DNA integration | Biological Process |
| GO:0003676 | nucleic acid binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR001878 | Zinc finger, CCHC-type |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR000477 | Reverse transcriptase domain |
| IPR005162 | Retrotransposon gag domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR021109 | Aspartic peptidase domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A1S3EG48 | _ |
| SwissProt term | Description |
|---|---|
| YI31B_YEAST | Transposon Ty3-I Gag-Pol polyprotein |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G42860 | zinc knuckle (CCHC-type) family protein |
| Medicago sativa L. | MsG0480020101.01.T01 | _ |
| Oryza sativa L. | ChrUn.fgenesh.mRNA.51 | expressed protein |
| Cucumis sativus L. | Csa017297 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001556s00043257.1 | _ |
| Codonopsis lanceolata | Cl_chr06_01380T | _ |
| Arachis hypogaea L. | AH12G11730.1 | Transposon Tf2-6 polyprotein like |