| Gene ID | Annotation |
|---|---|
| Am04G006210.1 | Zinc finger (C3HC4-type RING finger) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G006210.1 | mRNA | Chr04 | 16636053 | 16639956 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF02182.20 | SAD_SRA | 269 | 418 | 2.80E-53 |
| PF13920.9 | zf-C3HC4_3 | 134 | 179 | 7.30E-12 |
| PF00097.28 | zf-C3HC4 | 136 | 174 | 5.60E-11 |
| PF13445.9 | zf-RING_UBOX | 513 | 554 | 1.20E-09 |
| PF13923.9 | zf-C3HC4_2 | 136 | 174 | 4.70E-09 |
| PF15227.9 | zf-C3HC4_4 | 136 | 174 | 9.20E-07 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0044027 | negative regulation of gene expression via chromosomal CpG island methylation | Biological Process |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0008168 | methyltransferase activity | Molecular Function |
| GO:0032259 | methylation | Biological Process |
| InterPro term | Description |
|---|---|
| IPR027370 | Zinc finger, RING-type, eukaryotic |
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR019786 | Zinc finger, PHD-type, conserved site |
| IPR001965 | Zinc finger, PHD-type |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR045134 | UHRF1/2-like |
| IPR036987 | SRA-YDG superfamily |
| IPR003105 | SRA-YDG |
| IPR015947 | PUA-like superfamily |
| IPR047498 | E3 ubiquitin-protein ligase ORTHRUS 1-5, first RING finger, HC subclass |
| trEMBL term | Description |
|---|---|
| G7L7G5 | _ |
| SwissProt term | Description |
|---|---|
| ORTH2_ARATH | E3 ubiquitin-protein ligase ORTHRUS 2 |
| KO | Description | Enzyme |
|---|---|---|
| K10638 | E3 ubiquitin-protein ligase UHRF1 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G57820 | Zinc finger (C3HC4-type RING finger) family protein |
| Medicago sativa L. | MsG0480023808.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g01230.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa008317 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000059s00006320.1 | _ |
| Codonopsis lanceolata | Cl_chr01_53890T | _ |
| Arachis hypogaea L. | AH17G00690.1 | E3 ubiquitin-protein ligase ORTHRUS 2 like |