Gene detail

Detail information of Am04G006000.1 Annotation

Gene ID	Annotation
Am04G006000.1	sucrose nonfermenting 1(SNF1)-related protein kinase 2.3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G006000.1	mRNA	Chr04	16172430	16185176	+

Sequences

CDS:

>Am04G006000.1
ATGAACCGACCGGCTTCGTCGGCGACTGGAGGAGGCATGGAGATGCCGATTATGCACGATAGTGATCGCTACGATTTCGTTCGCGATATTGGCTCAGGGAATTTCGGCATCGCGAGACTTATGAGAGATAGGCACACTAAAGAGCTCGTTGCTGTTAAGTATTTCGAACGCGGAGATAAGATTGATGAAAATGTTAAGAGAGAAATCATCAATCACAGATCTCTCAGACATCCCAACATTGTCAGGTTTAAGGAGGTCATTTTAACGCCTACTCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTGTTTGATCGAATCTGCAGTGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATGCTATGCAAGTATGTCATCGGGACCTGAAGTTGGAAAATACGTTGTTGGATGGAAATCCAGCACTTCATTTGAAGATATGTGATTTTGGATACTCCAAGTCTTCAGTGCTTCATTCACAACCAAAATCAACTGTGGGAACTCCGGCATATATTGCTCCAGAGGTCCTGCTGAAGCAAGAGTACGATGGCAAGATTGCAGATGTCTGGTCATGTGGAGTAACCTTGTATGTGATGCTGGTGGGATCATATCCTTTTGAAGATCCTGACAATCCAAAAGATTTCCGGAAGACAATTCAGAGGGTTCTCAGCGTCCAGTATTCAATTCCAACCTTTGTTCAAATATCTCCTGAATGTCGCGACCTTATCTCAAGAATCTTTGTTTTTGACCCTGCTGAGAGAATCACCATGCCGGAAATAATGAAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGACTTGCTGAATGAAAAGAGAGTGGGTAACCAATTTGAAGAGCGAGATCAACCCATGCAGAGCATCGATACAATTATGCAGATAATTTCAGAAGCTACCGTACCAGTAGCTTCTTTAGACCAGTTTATGTCTGATAACTCTGATATAGATGATGACATAGATGATTTTGACTCTGACTATGAGCTTGATGTAGATAGCAGTGGGGAGATAGTATATGCCATATAA

Protein:

Promoter(3k):

>AM04G006000.1
GACTAACCTCAAGCTCATCAAAGCGATGAATGCCGAACCGGACCGAACAGTCTGACCAGGTCAACTGCGAATCAGACTCCTATCTGGTCTGTTTTCACCCAAAAATTGTCAAGTAATGGACCGCAAAGGCTAGCCCAAAAATAACCAAAGACAGGCTTTTAGTCACCGCAAAGGCTAGCCCAAAAGAATCAAAGACAGACTTTTAGTCTAATGGACTGCAAATGCTAGCCCAAAAGATTACTCAACCCGTCAATGGCCCATGTCCGTAGTCTTTGCATCTCAACCTCTTTTATAGCCAATTGTTAGATAGCTCTTGTTTCTCCCAAGCAATGTGGGACTAAAACAAGATAGAGAAAGTAATTCTCGTTTTTCTCAAACCAGTCACTGTAAAAGTGCGATTCCAGATTCGTTAACCGTTGGATCGTCTTCGGTTTTTGACAGCAGGTTCGTGGGACATATATCTTCACTTTCACTGTTCGGATCGTCGAAAACATGTCTGACGAGAGAGAAATTAGGGTGCAACATTAGTAAATCCCTTGTTCAGTCTCCCCCTTATGATCTGATTATTACTATTTATTATAATTCCCTTTATGTTTATATCTATTATTATTACTTTACAGTTTAATTTATTTTTACTTTACTCTTTATGTATATATCTATTATTACTATTTATTCATAATTCCCTGCGAGTGTCATGTATTAGTGTTTGTTTGAATGCAGGGGTATGAAGCTCCTTTGCGTCCTAAAAGGGTTCCGTAGAGAATAGGTCTAAGGCTTTTTCTATTGAGTGAACCTTTCAAGGGTAGCTCTATAGAGTCCTAAATAATGTTTTCTAGCTAGAGCTAACGACCCCAGTGAAGTCGCCAGCTGTAGCGACCGAAAAATCCGGGCGAGGATTCTTCGAAGGTATAAGGGCAAACATTAGAAAATCCGTTTGAGTTGGATAAAGATCCTTGAGACCAGATTTGGGTTCGGGAGTCGGTTATGTGTGGGGAAGGTATTAGCACCCCACGACATCCTTCCTAAAGAATGTTACCTGCTAACTAGTTGTATAAAAGAATGTTAATTTTGAAAATATTTATTTTACCCTTTTATTATGAATTAAAAGAAAAAAAAATTGTTTGTTGGCTTTTTTTATTTAGGGATTTTAGAACTTTCGATCGTTCGGTTCATTCGTCCTAAAACGATGACTGACCCGACCGTACGACCGACTTAATCCCCTGTTTTTGAAAATAATATTTTTAATTTTTGGAAGAAAACGATTTGTGTATGGAGTGATTTGATTTTATTTGAATAGGTATTTTAGGACTCTTGAGCTGTACGACCCATTCATCCTAAAACGATGACTAACCCGGCCGTACGACCGACTTAATCCCCTATTTTGAAAATAAGATCTTTATTTTTGGAGGAAAATGATTTGTGTATTTGCATTTTTGACAATATTCATTTTTAATACATATTTTAAGACTCTTAAGTCATACAGCTTATTCATCCTAAAACGATAACTAACCCGACCGTACGGTCAACTTAGTCCCCTAAAAAAATGAAATAACGAGGTGGGTTGTAAGAATAAATAAGGGTGCAATTATCAGAAGGGGGTGGCATTATTTCTCTTTTTCTCTTTTAACCCGTTTCTATTCTCTCCTTTTTTTTTATTTTGGTTAGTGGTTATGGTTGTTAGAATGTTTCCCTTTCTTTTAGTATTTGCTTGTTTCCTAAAAGTGATAACCTAATCTATTCCTAATTTTTCAAACAAACAAACCGGAAAAACTAATTTGCTCATGACATTGTTTTTCTCTAAATGAACCGATTATGAATTTACTTAATACCTTAGTATAACCCTAAATTTTTTAACTAAACCTATTACTAATTAACTCCTAACTCAGTGTTGGCCGGTGCAAAATTTGCTTTTAAAGACGAGCTGAGATTAGTCATTTATTTAAAGCATTTTTTCTTTTTGATAGACAATGTTAGTGGGGATAAGAGAAATTTTAGTTTCAAGAGTTTGAACCCAAACCTCCTTCTTACACTCTTTTGGTGCACTCCTTCGATATCCCTTAATTAACCGACTGAGCTTCTTAGTTGATATATTTATTTAAAGCGTTGTAACCGTCTTGGATAACCGGCAATGGTCCCATCATAACCCCAAAAAAAAAAAATTAAAATGGAGAAAAGAATGATGCGACAAAAATAGAGAAAGAGTATAGAAACTCCAAAATGCATGCGTGAGTCTTAACGGTGAAACGAATAAAGAATGATAGATAGAGTAAATGTATAGCCGCCAGAAAGTCAAGAAAACGCGTGAGAGAGTCTGTAGAAAAACGAGGAATTAATGGCATTGAAACTTGAAAGGTCATCGAAACGTGGTTGGTACGGTAATAGTAGTAGTATTAGTAAATGCGAACACTAAACACCACATTCATGGACGGCAACTATAGTATCGCGTGTGCGTCCTTCTCCTTACGCCAGTCAACCATGTTTCAATTTAAGTTCTCAGCTTTGGACTCATTACTCTTCCTCCTTAGCTTTTGGCTCGTCTTCTTTATGCTGTGGAAGACGAAGAAATAAAGAGAAGCAAAGAGAATATTCCGAACGCACACCTAACCTAACTAACCGTATGGACCGCCCTGTGGTGCAAGGCAAGCAGCTCAAGTGGCTGCGGCCTGACAACAACACATGACAAAGCAACCGACCAAATTACTTTTTCAATTAAATTAAAAAAAAACAAATTAAACCCACTTGCATTGCACAGTAGATGGATAAGAGCATAAGACAGCGACTGATTCAGAGACAACGGCAAAATTAAAATTTTTAAAAAATAAATAATAGAAAATAGAAAATATCTACAATGTTGCCTTTGAGGCAACAACCATTTTAACCAGCATCATCTCGAAAACGACGTCGTCTAAGACTTCACTTCCACTCTCTTCCTCTCCGGCTGCCGATCTCTGTTCTCCCTCAACCGCCACTTCACCACCGTCGTATTCGCCTTTCTCGCCG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	24	280	2.00E-71
PF07714.20	PK_Tyr_Ser-Thr	26	276	1.90E-33

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.2.4:CAMK_OST1L

Gene Ontology

GO term	Description	Category
GO:0106310	protein serine kinase activity	Molecular Function
GO:0005515	protein binding	Molecular Function
GO:0097306	cellular response to alcohol	Biological Process
GO:0071396	cellular response to lipid	Biological Process
GO:0009755	hormone-mediated signaling pathway	Biological Process

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A2K3NT85	_

SwissProt

SwissProt term	Description
SRK2I_ARATH	Serine/threonine-protein kinase SRK2I

KEGG

KO	Description	Enzyme
K14498	serine/threonine-protein kinase SRK2	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G66880	sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
Medicago sativa L.	MsG0180001256.01.T02	_
Oryza sativa L.	LOC_Os03g41460.1	CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Cucumis sativus L.	Csa018112	_
Glycyrrhiza uralensis Fisch.	Glyur000042s00005117.1	_
Codonopsis lanceolata	Cl_chr03_32340T	_
Arachis hypogaea L.	AH11G09500.1	Serine/threonine-protein kinase SRK2I like

Expression pattern