Gene detail

Detail information of Am04G005520.1 Annotation

Gene ID	Annotation
Am04G005520.1	cooperatively regulated by ethylene and jasmonate 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G005520.1	mRNA	Chr04	14355457	14356440	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM04G005520.1
AAGAGAGAATCACACAAGTCGATAAAGTTGGGTACTCGTGACCAGCTAAATTCTCTGTGTAGATTAGTCAACTAGTAAAAACTACTCACTAATAACATGGTAACCAATAATAATAATAATAATGAAAATGAAAAAAAAATATTTTATGTACCAATTGGAGTATTTTTTTTTTGACAATACCAATTGGAGTATATATATAGTATCTTTTTCTGTTTTTTGATTAATCCTTTTTGATAACATTAATCCACAAAAGACACCAACAAAAATCCACTCCATTACCGCTCAGTCTCACCACCATCATACACCAGATAGGTTAGTATTCATTATTACGTCTTTTCATTGTCCCACTAAACACACAACTAGTTTTGGTTTAATATAATCATGCCTTACGACGGCAACTCTATTTTTTTAGGAAAATCAACTCTATTATTTATTTTTTTCGGTTTTATCCAGGGTATTCACCGCCGACCGTAGTGACTAATCCCCTCACTGAATTATAGGTGCCTCAAGGGGCAGGACAACTGACCCAGAGTTTTAACGCTGCTCCGTACCTAATCAACTCTATTATTTAAAAAATACAGAGTTGTAAATTTTTTTCTCAAACCTGTATACATTAATAAAATAATAAAATAGTTTAAAAGGAGTATACATTAGTTAATCAACTATTTTTATCAACGTTTCAAACGGAGAAGAAACGGCTCAAATAATCGAATCGTAGACAACATTTGTTCATGGTTCAACTAGCATGAACCATATTCGGTTGGTTTAATTTTTAAAATTCTAGTTTTTATATCGGTTATTCAATGAAAGATTGCCATAATTTTTGTTTTTTTGAGAGAAAACAATCTCATATCATTTTATTATGAATCAAAAAGTCAATACAAGAAGGAGTAATCTCAAAGACAACCACATTAGCTTGTCTCCTTACAAAAACTAACTATTATTTTCAATGAGAATGAGAAGATAAAAGAGATCTAACTTGAATCACCATAGATAATGTCACATCAGTCTATTTTATTAATAAATTATTAAGTTGGCGACACATCAATATATTTTTATAATTAAAATTAATTTTCACTAATTTTATCTTTTTTCTCTAAAATATAATTGTTTAACTATCAAAAATTTTCTAACTCAAACTAAAATATGTTCATATTCGTGCGGTAGTAATATTTGAAATAAAACAATCATACTCTAATATAAGTTCTTTTTTTGACAAAATATCTTTTTTTTTGTCTAGCCTCCGGTATTCAGGGAAAATGGGCCCTAAATAATCAGAATTTGGTCGGGAGGTAAGTAAAGTCTGGCTCCAATTTGTTTCATCGTCGGGAATTGAATCTTATACCAGTTGAATATACGGTTTTTATATTATATACATATAATTCACATGTTTAAAAGGAAAACAATACACATCTTTCGTTGGGTTACACCTTCAATTTCAAATCTATTGATATATGTAAGGTAAATATACACAAAATACGAAATAATAGACCAATATACTTAGGCTAAAATAATCCTATTTAACATTTGATTTTTTTATTTACTCAAAAACTATAGTTATGGTGGAAGTAACGGAGATAATGAAAAGTAGAGAACATCTTGATCAAACTCAAAAACCATTTTTTGTCAAAAAAACTCAAAAACCATTTAGGACTTTGAAATTTGAACACCTCTTGATTTTAGATACCCTCTAAGGTCTCTCTTTCTTGGATTGTAATCCACTGCAGTCAATATGACTGCAATCACCTGCATTTAGTGTTAATTTAAGAGTATTTTTGTCATTTCCATACTAACTATTATTTTTTCTAGTTTCTCTCTCCTATTTTTTAGGCTAAATGCAGGACCTGCAGTCACAATGTGACTCCAGGGGATCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATCTTCTTTATCTCATACTACTTACACATCAAATCTATCCGTTATTGTCGCTCATGGTGTTGGAGAGGTAGATAAGCGTTCACCCATCATTTTTGCACCATTTATTAGACACAAATTTCTTAAACGTAATTTCAAAATACAAAAAAACAAAAACATCAATAATTATAGTTTTAACATGCAGGGAGTAAAATAAAGAAAGAAACCCAATAAATTGGTCTAATGAAGCAAGGTGGAGTCTCGTATTTGAAAAGTCTCATTTTGTAAATGTTTTTTTATCGCTATTCATAGAGTATTTCAACACTAAAGAAATAGTAATTTTTGTTCGTGTTTAGAAACAAATCTCACATCAGTTAACACCAAATTTTTATTGTAGGAATTGAATCTGGAGGCACTAAATCCATCTCATATCTCAGGGTAGCTCAAACAAACTACCCGTTATAAATGCTTTAAGAAATCGATGTATTTTCTCTTTCAACCGATGAATCATCTTCGCACCCTAAATTTTTCTATAAAATAACATAGTTGATGAAGAGGAGGAGGAAGCATCTGACTTCCGTAACCTACGTTTTAAAAGGACGGCTAAGAATTAAAATTATAAATACCAAACGGTGAAAGGGAAAGGTACACTCAATATTTAATAAACGAAACAAAAAATAGGATATTTTGTTTTTTCAATAGTGAAGGCAAAATAAAAAAGTCTGGAGAGTGATTTTGTCGGTGAATTAAATTTATTTATTAAAAAAACAAAAAAAAAAACTAGAATGATTATCTTGTTGGTAATTGATTTGGTATTATTAAAATATAAAAGGAGCTGAGTTGAGAGGGTTTCAAAGGAAAAAAGAACAACGTGGAAGCTTACCCATATGACAACCTTAGAGACGGTCTCTTCTCTTCTCTTCTCTCCATAACATAACATAACATAACACAGCCTTAGATTTTTCAGTTTTTTCATGAAGATTCACTGTCTCTCTTTTTAACAAGAAAGAAGGAGAGAGAGAGAGAGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00847.23	AP2	11	60	4.60E-12

Gene family

Gene family	Subfamily
Transcription Factors Family	AP2

Gene Ontology

GO term	Description	Category
GO:0001067	transcription regulatory region nucleic acid binding	Molecular Function
GO:0006952	defense response	Biological Process
GO:0009873	ethylene-activated signaling pathway	Biological Process
GO:1900057	positive regulation of leaf senescence	Biological Process
GO:1902679	negative regulation of RNA biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR016177	DNA-binding domain superfamily
IPR036955	AP2/ERF domain superfamily
IPR001471	AP2/ERF domain

trEMBL

trEMBL term	Description
A0A1S2YYE2	_

SwissProt

SwissProt term	Description
ERF11_ARATH	Ethylene-responsive transcription factor ERF011

KEGG

KO	Description	Enzyme
K09286	EREBP-like factor

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G50260	cooperatively regulated by ethylene and jasmonate 1
Medicago sativa L.	MsG0580024803.01.T01	_
Oryza sativa L.	LOC_Os04g55520.1	AP2 domain containing protein, expressed
Cucumis sativus L.	Csa010224	_
Glycyrrhiza uralensis Fisch.	Glyur000087s00008559.1	_
Codonopsis lanceolata	Cl_chr03_35530T	_
Arachis hypogaea L.	AH05G05220.1	Ethylene-responsive transcription factor ERF010 like

Expression pattern