| Gene ID | Annotation |
|---|---|
| Am04G005350.1 | WD-40 repeat family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G005350.1 | mRNA | Chr04 | 13945082 | 13955932 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00400.35 | WD40 | 205 | 239 | 7.60E-51 |
| PF00400.35 | WD40 | 387 | 423 | 7.60E-51 |
| PF00400.35 | WD40 | 478 | 516 | 7.60E-51 |
| PF12894.10 | ANAPC4_WD40 | 372 | 446 | 3.70E-30 |
| PF20426.1 | NBCH_WD40 | 456 | 523 | 3.90E-20 |
| PF08513.14 | LisH | 10 | 35 | 8.50E-10 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| GO term | Description | Category |
|---|---|---|
| GO:0045892 | negative regulation of DNA-templated transcription | Biological Process |
| GO:0000118 | histone deacetylase complex | Cellular Component |
| GO:0004402 | histone acetyltransferase activity | Molecular Function |
| GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process |
| GO:0006338 | chromatin remodeling | Biological Process |
| InterPro term | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR019775 | WD40 repeat, conserved site |
| IPR001680 | WD40 repeat |
| IPR006594 | LIS1 homology motif |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR045183 | F-box-like/WD repeat-containing protein Ebi-like |
| trEMBL term | Description |
|---|---|
| A0A1S2YYD5 | _ |
| SwissProt term | Description |
|---|---|
| HOS15_ARATH | WD40 repeat-containing protein H15 |
| KO | Description | Enzyme |
|---|---|---|
| K04508 | transducin (beta)-like 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G67320 | WD-40 repeat family protein |
| Medicago sativa L. | MsG0580024779.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g22220.1 | F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed |
| Cucumis sativus L. | Csa010149 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000042s00005098.1 | _ |
| Codonopsis lanceolata | Cl_chr02_20770T | _ |
| Arachis hypogaea L. | AH15G01030.1 | Uncharacterized protein like |