Gene detail

Detail information of Am04G005150.1 Annotation

Gene ID	Annotation
Am04G005150.1	Protein kinase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G005150.1	mRNA	Chr04	13343993	13353529	-

Sequences

CDS:

>Am04G005150.1
ATGCAATGCAATGCAACCTATTGCATTTGCAATTTGATGGCCATTAGGCCTTTCCATTCCACCACCTTGTCGTGCGATACATTGGTCTCTCTTTTCCGCAATCGTCCTTCATTTTCCTCTACCAACAACTTTTCCTCCTATATTCCCGTCCTCCGTCGCTTCGCTGCGTCGGCGTCAACTTCATTCTCACGCTCTCCTCATCATTCACACCCTCCTCCGCAGCCGCCGTCCGACACTCTGGCGCAGAAGATCGGAAAATCCACTCGCCACCCTGGCGCTACCTCTAAGGCCAGAATTTACGCCGATATCAATGTTATTCGACCCAAGGAATATTGGGACTATGAATCCCTTGCCGTCCACTGGGGGGAACAAGATGATTATGAGGTTGTGAGGAAGGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAGGGTGTTCACTGTACAGATAATGAAAAATGCATTATCAAGATCCTCAAACCCGTGAAGAAGAAGAAGATAAAGAGGGAAATCAAAATATTGCAGAATCTGTGTGGAGGACCCAATATTATAAAGTTGCTTGACATTGTTAGAGACCAGCAATCAAAGACCCCAAGCCTTGTATTTGAATATGTTAATAACACTGATTTTAAAGTGTTATATCCTACCCTGTCAGATTATGATATACGATATTATATCTACGAACTGCTGAAGGCATTGGATTATTGCCACTCGCAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTAATGATTGATCACGGGCAGCGCAAGCTTCGACTTATAGATTGGGGACTTGCAGAATTTTATCATCCCGGGCAAGAATATAATGTTCGCGTTGCCTCGAGATATTTCAAAGGTCCTGAGCTACTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGTCTCTTGGTTGTATGTTTGCCGGAATGATATTTCGGAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTAGTGAAAATAGCCAAGGTACTTGGAACGGACGAATTAAATACATATCTGAACAGGTATCGTATAGAGTTGGACCCACAGCTTGCAGTGCTTGTTGGGAGGCATGGCCGGAAGCCATGGAGAAAGTTCATCAATGTGGATAATCAACACTTGGCTGTTCCTGAGGCTGTTGATTTTGTCGACAAGTTACTACGGTACGATCACCATGAACGGCCCACTGCAAAAGAAGCTATGGCCCACCCCTACTTCAATCCAGTCAGAAATGCAGAAAGCAGTAAAAGTCGTACACATTGA

Protein:

Promoter(3k):

>AM04G005150.1
CCGAGAACCTCGGCGGCCTCCGTGGACCTGTCGGGAGCGAAGTTGGGAAAGTAAAGTTGAGTCCAGAGCTGTAGAAACCAGATAGGACCCTCGACCTTAGAGTAAGAGCCTTTGTCCTTAACCTGCATAACAAAGCTATCCAGGCTTTTGTAAAGAAGGGCGAGGAAGAAAGATCTCCAGGCGTACTTCTGGCCTGTTTGCAGCAATTGGACAAACACGGAGAGTTCCTTGACAACACCAAAAGATTTAGTGCTGAAGAAGAATCTGTTGAAAAAATACATCAAGAAGGCGTGGTGTTCTCCATCGATAACAGGCCCTGCAGGCCTGGCGTTTTTAGACAGAAGGTTTGAAAAGGAAGAAGCAAAGACAAAAGGGGGGGGGGGTCTACGCCCATAAAGTCAGGATTGGCATGAACCTCTAGGCCACCAGCGGGGAGTCCCAAAATGGCAGCCACATCCAATAGAGAGGGGGTCAGGATGCCCCAAGGGAAAACGAAGGTGTTGATGGTGGTCGACCAAAAGGACATCAACGGGAACAAGAGGTTGGCAGCGTGGGAAACCTCTTGAGTTGACACCATGATCATGTCATAGATTCCCCACTCCTTCCAGGAAGAACCTTTGTGCGTAGCCAAGAGGTTTACCCAATCGTTGTACTCGGCATTACCCTTCGGCCACCCCCTGAGATCGACGAACTTCGCCTCGGCGTTATACCAAGCGAACTTAAGAGGGAGGTCGCAGGAACCAAACCTCTGTCGAAAGAGCGTGAGGCCATGATCAGCGCTGGTGGCGGTGGGCCGTAGAACAGAAAGGGGACCAATGCAGGCAAAAATAGAGGGAACGGTGCTCTGGGAAGAAGAAGCCATGGTTGAGCGAAGGAGAAAATCGCAAGGAAGACAAAAGGGGTTTTGTTGGGGAAAACAGAAATGAAAGCATAGGCATCATTGCTATTTATAGCCTTGGGCCACAACCGCCGTGTCATTGGGAACCATCGAGCAATCGCTTCGATTAGCGCGAAGCGCCACGTGTCACGGAATGACAGGATACTCACTTTAGAATGGTCACATCAAGTCATCTCAAAAGGTTTTTTTTTGCACTATCAGTCACGTCCTCGCGGCCACACGACAGCACAAAAAGGGGGGCAATTGTTAACACCCAAAAATAATTAGGTTGTAGGGCGAGGACTGAATGAAGAAGGCAATAGAGCTGGAGTATTGAGGCAGGTCACTAGACAAGGATTTTAAGAGATAATTGCCTGAGAAAATGATCAAGGGAAGCCCTCAGGGCATATCACTAGACAATTCCCCAAGGAAGGGGTTAGACCGAGGAGCAATGAGCGAGGTCGAGGGAGAGTACAACCTCAGCCTATAGAGTAGGGATGTCAAAATGGGCTTGGCCCGCCGGGCCGGCCCATTGGCCCACCAAAAAAAGGCGGGCAGGGCTAAGGTAATGTTGCTCGCGAGCCCGCGTTGCCCGGCCCGCTTTGCCCGCCAGCCCGCGGGCTAAACACTGTGGCGGGCCAAACCGCCCGTTAGCGCTTTTTTTATTTTAAAATTCAGTGTAAATTGACGGGCCAGCCCGCTGACCCACCTGCCCATCATTTCGCGGGCAGGGCATGAATATGGCGCCCGCGTCCGTTAACGGGCCGGGCCGCCCTATTTTTAGCGGGCTGAAGGTGTTAACGGGCCGGGCCAGGTCGCCCTATTTTTAGCGGGCTGAAGGCGTTAACGGGCCGGGCCAGGTCGCCCGTTTTGACATCCCTACTATAGAGTGCCACGACCAGGGTAGGCTCGGGTGCCTGAGTTACTGTGTGGGGGCGAAGGTTTGCTGAATGAACCAAGTGGCCGAGGCAAAGCGGTTTTACTTGGAAGGCACATAAGAGACATGCACGAAGATGGAACATGGGAGCAGTTGAAGATCAAGCGAAGGCAAATGTTGGCTGTGTTAGTGGCCGACGAGGGCCTGTGTATATAAATAGGAGAGTAATTGTACAGAGAAGACACACATCAATCAATCAAAAACTCTACGTTTATTTCATCTATCTGCTTTTATCGCACTTTATCTTTATTTTTTATGCATTAGCCAGTAGTATAATCCAACCCTCGCAGTCCCCTCTCACCTAACCTGGCCCTTTCTAGAGGAGCCAGGATACCCACAGTCAATGAGCAGAGTTCCCTCCTTGGCGCAATCGCTTGAAGAACAAGGACTCGAAGAACTTGCTCAAACCCCTGGCCGAATCCACGACTAGGACCTAAGAGTTTGAATCAAGGAACAACACATACATAAGTAAATTCATAAAAACACAAGTTCTTAAATGTAATCACCGCGAGTTTACGAGTCTACAATTTTACATTGTATTAGACCTTAAATGTAATTATTGGTCAATATTGGTAGCTACTTTGGTTGAATTAGCTATTTTCTGTAGTATATAATGGATATATAAAGTTACTTTTACATTTTCAATACTTTTGCTCTCCCTATTTTATCAAATCCGCAAATTTAGTCCTCCCATTTCACTTTTTTCAATTTTGATTCCCCAATTTTATTAAATCCGCAATTTTAGTCCTCCTATTTTTTCTCGCAATTTTGATCCCCAATTTTAGTTCCACGTTAAATTGGCTTCCAATTTTTGACGACAATGCTGACATGTTAGTAAAGTGGTGACGTGACTGACGCATGTTGTGCTACCACACCCAACGATTACACTAGCACGACACATGTCTGCCACATAAGCATTTTCGACAAAAATTGTAATGCAATTTAACTGAGGGATTAAAATTAAGGATTGATAAAATTTGGGGATCAAAATTGCGAGAGAAAAATAGAGGGACTAAAAATGTGGATTTAATAAAATTAAAAAACTAAAATTGCAAAAAAAATAAAATAAAAAGATCAAAATTACAGATTTGATAAAATAAGGGGGAACAAACTGTAGTTAAGGGAAACAAATCAAGGGAGAAAAAGGGTATGAGTGTTGAAACATCAAAAGGGTGGGTAGCTGCAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	127	412	4.30E-65
PF07714.20	PK_Tyr_Ser-Thr	129	316	7.10E-19
PF01636.26	APH	237	280	1.50E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.3:CMGC_CK2

Gene Ontology

GO term	Description	Category
GO:0071215	cellular response to abscisic acid stimulus	Biological Process
GO:0040008	regulation of growth	Biological Process
GO:0016020	membrane	Cellular Component
GO:0140994	RNA polymerase II CTD heptapeptide repeat modifying activity	Molecular Function
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR045216	Casein Kinase 2, subunit alpha

trEMBL

trEMBL term	Description
A0A1S2YYA7	_

SwissProt

SwissProt term	Description
CSK2P_ARATH	Casein kinase II subunit alpha-4, chloroplastic

KEGG

KO	Description	Enzyme
K03097	casein kinase II subunit alpha	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G23070	Protein kinase superfamily protein
Medicago sativa L.	MsG0880045982.01.T01	_
Oryza sativa L.	LOC_Os07g02350.1	casein kinase II subunit alpha-2, putative, expressed
Cucumis sativus L.	Csa010165	_
Glycyrrhiza uralensis Fisch.	Glyur000492s00023513.1	_
Codonopsis lanceolata	Cl_C00041_unscaffolded_00130T	_
Arachis hypogaea L.	AH11G11670.1	Casein kinase II subunit alpha, chloroplastic like

Expression pattern