Gene detail

Detail information of Am04G004830.1 Annotation

Gene ID	Annotation
Am04G004830.1	Integrase-type DNA-binding superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G004830.1	mRNA	Chr04	12198216	12201186	-

Sequences

CDS:

>Am04G004830.1
ATGAATATAGGTAATGTTACTTCACAGTCTCATCAGACACGGCCTTCCTTTTCTACTCATGAATCAGTTCCTCAAAGCTTTTACCACCCTACACCTCTTACTAATTATGGCTTCTACTATGGACTTCAAGGTGAACATATTGATTTGTATTCTGCCTTGCCTATTATGCCCCTCAATGGCTCCATAAATGGTGTAGATTCTCTCAGTAGACCACAAGCACAAGAAATGGCAATGGCAACTACTTCAATACCAAAACTTGAAGATTTTTTAGGTGGTCAAGCTATGGGGATTCCTCAATATGAATGCAATTCAACCAAAGAAGCAATATATCTAAGCTTAGACAGTGCGTTTTACAACCAAACTTCATGTCAAGAACTAAGCAATCCAAATAACTTAAATCATGTACAAGAGATCAATATCAGCCAGCAACATCTCCCATATTACTCAGCCTTAAAAAGTCATGAGTTAATGTTAGAAGGGTCCAAGCAAAATCAGCTAAGAGATAGTTTCCAGCTTCAAAATATAAATGAAGATGAAATTTCTGGTCTTGAGAGTAAATGGGTCTCAAGGGACATTCATTCTAGCCATGAACAGAAGTCAAAGAACAATGGAAACGAATCCAGAGTCATTGGATCAATGACATGTGGATTGTCCATGAGTCCTAGCTCACAATCAAGCTGTGTTACAAGTTCACAACAAACATCACCTGCTTTCATTGATTCTATTGCCATAGATGTGAAGAAAATGGGGGCTGAAATGGTGGACTTGGAAGAGAATCAGAAGCAAACTGTTCTTAGAAAATCTATACATACCTTTGGCCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATAGGTGGACCGGAAGATATGAAGCTCATCTATGGGACAATAGCTGTAAGAAAGAGGGCCAAGCTAGGAAAGGAAAGCAAGGGGGTTATGACATGGAAGAAAAAGCTGCAAGAGCTTATGATATGGCTGCACTCAAGTATTGGGGACCCTCCACTCGTATAAACTTCCCATTGGAAAATTATCAAAAGGAATTTGAGGAAATGGATAAAATGACCAGACTAGAATATGTTGCTCATTTACGAAGGAATAGCAGTGGATTCTCAAGAGGAGCTTCCATGTATAGAGGAGTAACAAGACATCATCAACATGGAAGGTGGCAAGCTAGAATAGGTAGAGTGGCAGGAAATAAAGATCTATATCTTGGGACCTTCAGTACACAAGAGGAAGCAGCTGAAGCATATGATATTGCAGCTATAAAATTCCGAGGAGTTAATGCTGTTACTAACTTTGAGATAATAAAATATGACGTGGAAAAAATTATGGCAAGCAGTAACCTTCTTAGCAGTGAAGTAGCTAGAAGGAACCATAAACCTTCTGCATATGATGAAGACATTCAAGGAACAATTCCAATGCAGAAGAAGTGCAAAATTCAAACAGAGTGGGAGATGGTTCTCTATCAATCCTCACAAGCACTTTACAGGAATCAACCTTTCTCAATGGCTTTAGAGGAAATGGGTAGATATGTGTCAAATCCTTCTTCGTTGGTGACAAGTTTGAGTAGCTCAAGAGAAGAAAGCCCAGAACAAGACAATCTTGCCAATGCAGTTTGGAATAATGTCTTCAACAGTGTTTAG

Protein:

Promoter(3k):

>AM04G004830.1
CACGGTGTGTGGCGAGTAAGGGGGAGTGGGATAAACATGGGACATGAGAATATATAACGACTCAATACATTGTTCTTGGGCCCGGCCCAGAACAATTAGGCCCACATGAGCGAAAAATCAATTAAAAAATTAGGGTTTTCAACTATCATCTCTTCGGTTCATGTCTACGACTCACTCTCTGTCTCGCTGTGTTTTTCCGTAGTACTATTTTGTCTCTGCGTCATGTCTTGTTTGTTGCAAAAATCTTCTATCGATTCTTCGTCTCTGTTGCGGACAACTCTTTTTTAAAGTGAATGTTTTATTTTTACGTCTTTCCCCTTGTTCTTTTTTGTTTAATTTGTAATGACTGAGGCTATGATGAATAACAACATTTCTCGATACTGATAATGACCAAAGCAATTTTTATTGCTCTTGATGACAGTGTTTGTGCGTGTCTGAGCCTCTTACTGGTTATATGCAGTTTTTTCCTACTTAATCTGAGGAAATCGTCTCTTCTTTTGTTTAGTAGTAGCATTTTGTGTGAATTTTTTTAAAAAATATTTTACTCTGAAGCAGATTCGATCTTACATGGCTTTTGCAGTTCTTTTATTATCGGCAATGCTCTGTAATCTGCAGATGGATTTTCTATGAAGATTCGTGTGTTTCTTTTTAATCTCAAATTTCAATCTACTCACTACAATAAACAATTTCATTGCTTAAAATGATCATTTCAGTTGTTAGCATTTTTTGCTGTCTCCTGCACATGATTTGAATAAAAAGCAGATATTACATAGTTGAACTTTTATTTAATATCATGGTTCTCATTGAATGAGTCAAGGTGATAACCGAAGCACAAGGCTGATGGAGAATAAGGAATACACGAAAACATTATGGTTAAATCAAACCCTGACTAATAATGTGGTTAAAGATTTTGAATTACAAAATACAAAAGCTGTTTTGGAACTTTGTTGATTTTATGAATCAAGTTATCTAATGTGACAGTTTTATGGACCAAAAGTTTTATGAATCAAGTTATCTAATGTGACAGTTTTAAACGGATATCTTTTTAAACGGGTACCCGCGGGTACCCGCGGGTATTTGTAAATTAATAAATAAAAAACTTTTAAAAATAAAATTTGAAATACCATAGAAAATTAGTTTTTTTAACACTTTTTTTGATTCATTTATATAAAAAAATTACGCATTTTGATATGCATTTATCGTATCAACTATTTATTAATATATAATTGTTAATGAATTGAGAAAAAAAACTAAAATTATGATAATAGAAACTTGAAAAATAACAACTAAACATTATCCAAAATATTAGGATAAAAGATACAACAAAATGTGAATAAACATCCACTTAAACAACAACAACAATAGATGATAAAAAAAAAAGGAAGAAAATAGTTGTGTGATGGATTTACTAACGGGTACGGGTACCCGCGGGTCCGGGTACCCCGCTACCCGGACCCGCCCCGTTTATTGACGGGTAGTCAAAATACCCGTTTATTTGGCCCGCGGGTACCCGTTTAACTACCCGATCCGGACCCGTGACGGGTTTTACCCGCGGGGACCCGCGGGTCCGGGTTTTTTTGACACCCCTAACCAAAACCAAAGACCATATCACTGGTGGTTCTTTTTTTTTGGTTACATAATAAAGAGTGCCTATGGCTTAAAGCAACAAACAAACTAAGCTCCTAAACTTTGACATGGCGCAGCTCCCTCTGGTTACCCTCTCTAGTAGTCTCTTATCAATATTACCTCTTGTTAGGGTAATAGTAATATCTGCTAGTTACACCCCCTTAGCAAAGCCCGGTCAATTTAAGGCCATTACATGAAATCAGGGTCCAAATCATCAAGGGTCAATATCACACGACGAGATCGAACGGCCCAAAGCCATTAAGACAAACATCACTAAAACTCTATAAATACAGCATTCAATGCTTATTAATGGTAAGCAAGCTTTACAACTAAAACTTATTCACTCAAAAACGGACTTGAGCGTCAGAGTGTTATTGCAGGTACAACCTCGCCATTTCAAGATCGACCACCTCAAGCTCGAACAAGACCATTCTCTCAAGATCGACCACCTCAAGCTCGAACAAAGTCCGATCTCCTCGAGATCGACTATCTCAAGACCAAAGGACATAAACAGAATCAAGAATAAAACATCTACTAACTGCGTAATACCAATCACTAAGATCGGAATCACATTACCGAACACCTCTCTTGTAAATAGCATCAATCTGTTAAGCATAATTGACAATGGGAATTATTGGTCGTTCTGGTTTTTGAAAACCATTCTAAAAAATAAGACTATTCCTCCATTGCCATAAGTACCAGCAAGATACCATAAAAATAGTCCCCGACTTCGTATTTGTCACGTTGCCAACAGATTCCATGAGTCTTTAACATCATGGTTATAAAAATTACAGATTATGCTCGAAGGAACCAAACGAATCGAAATACAAAAAACATCATGGTTTCAATTATTCTTAGTAATTGTTTAAGCATTAATTAATCAAAAGTACAAAAAACAAAATGTAGACAAAATAGAGTGTAGATAGATATGATGAACAAAAATGAAAGCTAAAAAAAAAGGCAAGTAGGAAGGGAGCGTAGAATAAAGCAAAAGGGAACGTCTTTCTCATGCACAGATCCCAATGGAATGCTGGAAGAAAACCTAGCATTCCTTGCTGGATCACATTCTTTTTGTTTCAGTAACCTCCTTTGCTTTGCTTTGCTTTCTTTCCCTCTACAAATACATGCTGACTCACCCATTATACACTTCAGTTCACACACACACATAATAAAAAACAGAGGAACCCTTTGGATTTATTTACATTCATGCTTGGTTAGATTTGGCCTATTCAACCATACCAAAAAAAAAGTTACGTACATATTTAATAATGCAAGTTCTGGTTCTAACTGGAAGAAATATTATTAATAGAGACTACTAGAGTCTAGAGAGAGTGGTTGTTTTCTGTTTATGCTAGTTGGTTTATCAAATTCTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00847.23	AP2	278	333	1.80E-18
PF00847.23	AP2	378	427	1.80E-18

Gene family

Gene family	Subfamily
Transcription Factors Family	AP2

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003677	DNA binding	Molecular Function
GO:0016301	kinase activity	Molecular Function
GO:0006952	defense response	Biological Process

InterPro

InterPro term	Description
IPR016177	DNA-binding domain superfamily
IPR036955	AP2/ERF domain superfamily
IPR001471	AP2/ERF domain

trEMBL

trEMBL term	Description
A0A371GFV2	_

SwissProt

SwissProt term	Description
ANT_ARATH	AP2-like ethylene-responsive transcription factor ANT

KEGG

KO	Description	Enzyme
K09285	AP2-like factor, ANT lineage

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G37750	Integrase-type DNA-binding superfamily protein
Medicago sativa L.	MsG0880046012.01.T01	_
Oryza sativa L.	LOC_Os03g56050.1	AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed
Cucumis sativus L.	Csa012146	_
Glycyrrhiza uralensis Fisch.	Glyur000212s00017537.2	_
Codonopsis lanceolata	Cl_chr03_34550T	_
Arachis hypogaea L.	AH15G00270.1	AP2-like ethylene-responsive transcription factor ANT like

Expression pattern