Gene detail

Detail information of Am04G003970.1 Annotation

Gene ID	Annotation
Am04G003970.1	receptor-like protein kinase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G003970.1	mRNA	Chr04	9469027	9471420	+

Sequences

CDS:

>Am04G003970.1
ATGGCAACAACTCCTACACTTTACATATTTTCCATTCTATTTCTTCAACTTATGTTATTAGTCTCGGGTAACGTTAATCGTAGTTCTACACTCACCACAAACAGCAACGAAACATGGCTTTCACCTTCCAATGAATTCGCCTTCGGATTTCGCCAAATTACCGGAACCACCCTATTCATGCTTGCCATATGGTACAGTAAAATACCCGACAAAACCATCGTATGGAGTGCAAAAACATCATCAGACCAAAACAAAAACTACCTCGTAGAAGCACCAAAAGGATCACAAGTTCAGCTAACATCAGAAGGACTTTCAGTTACAACTCCTCAAGGTGAGTCCTTATGGACAGCACAACCAAACGATGCTGTTTCCTACGGTTCCATGCTTGATACCGGAAACTTTGTTCTTGTAAACAATACTGGAACTATTGTTTGGGAAAGTTTCAATTATCCCACTGATACTTTGTTGCCTAATCAATCTTTGGAGTTAAGTGGTAACCTAACTTCTAGATTCTCAGAGACTAATTACACAAATGGAAAGTTTCAACTTTATTTTAATGATAATGATAATGTTTTGTTGTTAAGCCCCCTTGCTTGGCCTACTCAATTACGTTACAAATCTTACTATAGTTTTGATGTTACTGAATTTGGTTCACGTTTAGTGTTTGATGAATTAGGTGATATTTATGTGGAGACAACTAATAATAATGGGACTAGAATTAAACTTCAAGGGGAAGAATGGGGTAATTTGGTTCTTGATTCTAAGTCGTATTACTATAGAGCAACACTTGATTACTATGGAGTATTTACACAGTATTCTCATCCAAGAGACAACAAGGTTAAGGAAGGTTGGACTATTATGCGATATGTTCCTGATAACATTTGTGTTGCTGTGTTTAATGATATAGGTAGTGGTTCATGTGGATATAATAGTTATTGCTCTATTGAAAATCTTAGACCTAGTTGTAAGTGTCCATATGGGTACTCATTGATAGATCCAAGTAATCAATTTGGTGGATGTCGAATTAATTTCACACTTGGTTGCGGAGCTGATAATAATGGTGAGGGAATGCCAGAAGAGGAATATGAAATCACTGTTCTTAGAGATGTGAATTGGCCTTTATCAGATTATGAAAAATTGGAGCCTTACTCTCAACAGGACTGCCAACAATCTTGCTTGAATGATTGCATGTGTGCTATTGCTATTTTCGGAAACCAAATTTGTTGGAAGAAAAGATTGCCTCTTGCTAATGGGAGAGCAGAGATTGGTGGTAATTTGGTACTTATCAAAACAAGGGTTACTCCTCTTGGTAACCTTGGTCCTAATTCGACGAAGGAAGATCGAGGTAAGTCGGTTCTACGAGGTTTATTTATTGGCTCTGCTGTATTTAACAGTATACTCCTGGCTATGGTTGTTTTGGTGATTCTCTTGAAGCCAAAAAAGGTTGTCCAAGCTGCAATTACTCTCTTGGAAACAAATTTACATTCATTTAGTTATGAAGCATTGAAAGAAGCCACATGGGGATTTAGTGAAGAACTAGGCAGCGGTTCTTTTGGCATTGTTTACAAAGGTGAATTGAAAGGAGCATCTTATAATTTGGTTGCTGTTAAGAAATTGGACAGATTAGCACAAGAACGCGAGAAGGAATTCAGGACTGAGTTGAGGGCCATTGGTAAAACCTGCCACAAAAATTTGGTACGGTTGATTGGATTTTGTGACGAGGGAGTCAATAGGCTACTGGTGTATGAGTTCATGAGAAACGGTACTCTAGCAGACGTCTTATTTGGTCAAGCCAAGCCCATTTGGAATGTAAGGGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTACATGAAGAGTGTGACACTCCCATTATTCATTGTGACATTAAACCTCAAAATGTACTCATAGATGGGAATTTCACTCCAAAGATCTCTGACTTTGGGTTGGCCAAGTTGTTGTTGGCTGACCAAAGTAGAACCAATACTATGATACGAGGAACTAAAGGATATGTCGCTCCTGAATGGTTCAAAAATGTTCCTGTGACGACTAAGGTGGATGTTTACAGCTTTGGTGCCATGTTGCTGGAGATCATTTGCTGCAGAAAAAGTGTGCTGCTGATGGAGTCAGGGGAGGAACATAAGGCAATATTGACAGATTGGGCTTGTGATTGCTATATGGAAGGGAGAATAGATGTTCTGGTGGAGAATGATAAGGATGCCTTAGCTGACTATGACAGGTTGCAGAAGTGGGTAAAGATAGCAATTTGGTGCATTCAAGAGCATCCCGAAAGGAGGCCAACAATGAGGAGGGTCATGCAAATGCTAGAAGGTGCGGTTGAAGTCCCTAATCCACCATTGTCTCTTTCCTTCAGCTCTGTTCCTTGA

Protein:

Promoter(3k):

>AM04G003970.1
TGCTCCTACGCTATTACGCACTTCCTCATTGCGCCAGCTGCTCCGCCGTGTACAGCAATCTCTGTCGCGAGTTAGCATAGCTCTGCTACTGTGTCACGTGAGATCGTGCGCTCCTACGCTATACAAGCGCGTTTGACAACCATGAGTACAAGCAATCGCCAGATTCATAAAATAGAGCTCAATTGTAATCATATCCCATCAAACTCTTATGCAACCTTTTCCAAAGTAATAAGAATCTATATTTGATGCAAGCAGGGCCGAGTCTTATTAAGCCAAATACTAGAGAAGAATGCTAGGCAGTATACCGATGTATATGACACAATAATCATTAAAAAAATCATATTGCAGAAAGATTCTTACCCACGTTAGCAAGCCGATTTACCCATCCCGGAATAGAATTTCCTGTTAGTTGTTGGCAAACCTCATCTGTAAAATGGTTGCAATTTTTCGCAATCAGATGATAAGTGTCTCCATGATATTTTGAAGAGAGATGCTCCATGAATGAACGGAATTCTGAAACAGTCATATCAGTGCTCCCCAACAATATCGATCGTCTGAAGATGAAGCCAGGGCAGCTTTTAGGTTCCACCTCAAACACACCACTAGTTGGATATTCATGTGCTCCGAAGCCATATTCCATACCATGTACTGTTCATGAAAATTAGATATAAGCTGTTGCAATGTGTTATTAAAGTAGCATAGAAGTACATCCAAGCTCCTTGTCAGTATGTTGTTCTAGGGAAATAATTCTACCCAGCATAGTCATTATATTAAACTTGTAACAAGCTTATGTATCCAGAGAACATTTTATAGTTATCAACAACTGTAGCTAACTTCCAGATAACCGTGAGAATAAAGCACTGACAAATAAAAAAAAATTAAGGGAAGGTGCTCTACAAAACTATAGCTGCAATACATATATAAAACCAGCAATACCTATTACACATACATGATACATGTGTTATGCCGTTAGCATGCAAACATGACCGAAGATGACACATCCATCCATAACCATAATCCACACCCAATAGAAATAGAATGCATGCATTTGTTTGTCAAAATATCCACTACTCTATTAATTACCCTACGAATCATAAATTCAGTATTGAAGGACATTAAGATCACAAATAATCCCAAAAATAGACAGATTAGTCAAATTACAAAGCATACCACAATTTCTTCAACAGAAACAACAACAGATAAAAGTTAAGAATTAAAAATTGACAGCAAAGGAAGTATAAGGAATTTCACAGAGAGACAAACCTTCTATACCAGAATGAAATATTCCAATGCCAAAAAGATAAAGATAATTGTTGATAGGAGTAAGATCATACACATTGAGATACACCATAGCAAGACTCTTGTTCCCAATTTCCCGCTCCCTTTCCGAGCTTGTACTCAACTGAAACCACCGCATTGTGAATCACAGCCTCATCTTACTTCCTGTTGCAGATAGAATAGGGGAAAAGAACTTCAAAAAATATCAACATCACCAAAAGATTCGATTCAAAGTTTTCGTAATCATAGTAGCTTTCTCTAATCGAATTGAATAGTAGAGATTCTAATCGATCAAATACATATGAATATTGAATTTGCAATGTAAAATTGAAAACTGTATACACAACACATAGAACCGGATCGCGGAAAAAAGCCCTAAGAAAGAAAAAAGGAAGAGGAACTTACGATAAATACGACGAGTGGGGGAAATTGGAAGTTGAAAAAGAATTAAGTGTGAAAGTTTCTAAGCTAAAATGAACAGTGACTTTGGATTTGGTTTTGAGTTAAAAGTGCCTTCGCCGCCATTATTCATCCCACTGGCTACCATAAAGCTGTACTATGTGTCTCTCTGTCTACGCTTGCCAAGATTATTATCTTCTATTAACTTTTTATTTAATTAATAACTAATACAAAAAATTATTTATGGATTTATTACTACGAATAAAAGACTAAAATACATTTTTTATCTTAATCTTTCATTTTTTTTGTCTATTATCTTTTAAAATATTCATTTATATTTTTAATTTTTTTAAATAAATTGACGGGTTTTATCTTTTTAAAGTTAATTAAAATCGTTTTTTTGTTAAGTGACGGTTAATTATGGCTTATGTGGATAGTGTGACATGAATAATTTGTCACGTAAGCACCGGAATTTGTTATTAGACTATTAAATATTTTTTTTCCATTTTTGTCTTTTATCTTTTTTAAAATATTCATTTTCTTCTTTTATATTTTTTAAAATATTTGTTTTCATTCTTTGATTTTTTATAGTTAATAATTAAAATTGTCCTTCAATTAACTCTTGGGTGCAAGTGATTAATGCACTCCATCTAAAGGGGCGGACTCGACTAGTACTCAGGTTCGATCTCCAGTAATGAAACAAATTGGAGTTAGATTTTACTTACCTCCCGACCGAACTCCAAATATTCAGGACCCCTTTCACCTGGACACCAGAGCAGGTCAAAGACTCCCGGACCAAACAGCAGATAAGCCGATAGCAAATAGGGGACAACCGTTAACTTAGCCAAGGATGATTTGCGAGAGAGACAGGTGAGCTTGACTTCGAGGTAAGTCATGGAGGAGAACTGTGATTCTATCATTCTGAATGAATTTCATTTCACTTTCCCTTGCCCTTGATGCAAGTTGAGTTTTCTTCAACATGTTAGTTGAACATTATTTAAGATCATTAACTACTCCATTGACTATTCATCCCGTGTTCTTGAAGGCATATCATTCAAACATTTTCAATCAACAAAAGGATCCAACGGTAACCAAGCACGCCAATTGCCAACTTTAAATACATCAACAGTCAACAGTCAAGTCAAGTCACTCACTTAATTTCTTTGAATTTTCTATAACCAGTAATTTACAAAACAACCACTAGACATTGTCAATTACTTGCTCATTAAATACTCTTCTTCTACTAATTTCTCAGTAAAATTCACATACATAAAGCCATTATTTCCCGAATTTCTAGCTCCATCATTTCTCCAAAATCATCTA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	510	776	1.60E-47
PF07714.20	PK_Tyr_Ser-Thr	509	778	6.70E-43
PF01453.27	B_lectin	84	164	2.90E-12

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.2:RLK-Pelle_SD-2b

Gene Ontology

GO term	Description	Category
GO:0106310	protein serine kinase activity	Molecular Function
GO:0005524	ATP binding	Molecular Function
GO:0030246	carbohydrate binding	Molecular Function
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0003677	DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR024171	S-receptor-like serine/threonine-protein kinase
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR036426	Bulb-type lectin domain superfamily
IPR001480	Bulb-type lectin domain

trEMBL

trEMBL term	Description
G7JXG0	_

SwissProt

SwissProt term	Description
LERK3_ORYSI	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G60900	receptor-like protein kinase 1
Medicago sativa L.	MsG0580024551.01.T01	_
Oryza sativa L.	LOC_Os04g39930.1	receptor-like protein kinase, putative, expressed
Cucumis sativus L.	Csa010509	_
Glycyrrhiza uralensis Fisch.	Glyur001081s00024626.1	_
Codonopsis lanceolata	Cl_chr06_04670T	_
Arachis hypogaea L.	AH05G03110.1	Malectin/receptor-like kinase family protein like

Expression pattern