Detail information of Am04G003930.1 Annotation
Gene IDAnnotation
Am04G003930.1 homeobox protein 2
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am04G003930.1mRNAChr0494255339427614+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF04618.15HD-ZIP_N31062.50E-29
PF00046.32Homeodomain1281821.10E-16
PF02183.21HALZ1842181.70E-11
Gene family
Gene familySubfamily
Transcription Factors FamilyHB-HD-ZIP
Transcription Factors FamilyHB-WOX

Gene Ontology
GO termDescriptionCategory
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specificMolecular Function
GO:0006357regulation of transcription by RNA polymerase IIBiological Process
GO:0005634nucleusCellular Component
GO:0043565sequence-specific DNA bindingMolecular Function

InterPro
InterPro termDescription
IPR003106Leucine zipper, homeobox-associated
IPR009057Homeobox-like domain superfamily
IPR017970Homeobox, conserved site
IPR001356Homeobox domain
IPR000047Helix-turn-helix motif
IPR006712HD-ZIP protein, N-terminal

trEMBL
trEMBL termDescription
A0A8B8LWF7 _

SwissProt
SwissProt termDescription
HAT4_ARATHHomeobox-leucine zipper protein HAT4

KEGG
KODescriptionEnzyme
K09338homeobox-leucine zipper protein

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G16780 homeobox protein 2
Medicago sativa L.MsG0580024545.01.T01 _
Oryza sativa L.LOC_Os09g27450.1homeobox associated leucine zipper, putative, expressed
Cucumis sativus L.Csa017141 _
Glycyrrhiza uralensis Fisch.Glyur000047s00003959.1 _
Codonopsis lanceolataCl_chr03_24300T _
Arachis hypogaea L.AH05G03030.1Homeobox-leucine zipper protein HAT2 like

Expression pattern