Gene detail

Detail information of Am04G002350.1 Annotation

Gene ID	Annotation
Am04G002350.1	Galactosyltransferase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G002350.1	mRNA	Chr04	5695248	5699507	-

Sequences

CDS:

>Am04G002350.1
ATGCGTAGCCGGGGATCACAAAACCGGCTACCTGGTAACTCTTTTGGATCTCGAGTTTCTGCTCTAATCTTTGCCATGATTGCTACCATGGCCACTATCTATGTTGCCGGCCAGCTATGGCAGGACGCACAGAGTAGGGTGTATTTAATCAAACAGCTTGGGAAAAAAACTGGTCAGGGTCATTCTGCTGTATCTGTTGATGATACACTCAAAATTATAGCCTGCAGGGAACAACAAAAAAAGTTGTCTGCCCTAGAGATGGAATTAGCTGCGGCTAGAAAGGAAGGTTTTGTTCCAAAGCGTTTGGAGGGAAACGATGGGAAGCATCCAACAAAGAAGATACTTTCGGTTATAGGAATAATGACAACTTTTGGCCGAAGAAAGAACCGAGATGCAATCCGTAAGGCATGGATGCCAACAGGTACAGCTATGAAGAATCTCGTAGACAACAAAGGTATCATTGTGCGATTTGTAATAGGAAGAAGTGCAAATCGTGGAGACAGTTTGGATAAGGAAATCGAAACAGAAAGCACTCAGACCAATGACTTCATCATTCTTGATAATCAAGTGGAGGCACCTGAAGAGATAGCAAAAAAGACAAAATCATTCTTCATTTATGCAGCAGATAACTGGGATGCTGAATTTTATGCTAAGGTCAATGATGATGTCTACGTTAATCTTGATGCTCTTGGAGGACTGCTAACTTCTCATTTGAACAAGCCCCGTGTATATATTGGCTGTATGAAATCGGGTGAAGTTTTTTCTGACCCGACACATCAATGGCATGAGCCAGAGTGGTGGAAATTTGGCGATGGAAAGACATACTTTCGACATGCTTCAGGTGAGGTCTATGCCATTTCAAAGGCACTGGCTCAGTTTATTTCAATTAACAGATTCATTCTTCGTACATATGCACACGATGATGTAAGCACTGGATCATGGTTTATTGGGCTTGACGTGATGCACATTGATGAAGGAAAGTTTTGCTGCTCCTCCTGGTCCAAAGGTCTCTTCTCTTCTATCTTCTATTTTCTACCCTCTCTCTCAGATACACATGCTTGCAATTTTTATATGGTTAGAAGTTAG

Protein:

Promoter(3k):

>AM04G002350.1
CAACCCTCGTTGGTATTTTGTCCCGCTTGATCCTAATGCATATGGAAAAAATATTTATTTTTAGAGATTAACCTCTTAAATAATAATCTCGGTTATACTTTGGTTTACCTAAAAAAAATTGTCCAGTAAAAGTTGTAAAATTGTTTTTGTAAAAAATAAGGGTTTAATTTATATACACTATTTCTTTTAGATAAACAATAATTCATTAACGTTTGGTCAAAAAATAATTCATTAACGCAGCAGTACGGGTGCTTAAACTCAAACAACATCAAGAAATTACACATTGTTTAGGCACGGGATTGGATTAATCCACCATGATGCAATAGACAAATTAGAATTACAGCTCACTCTATTAGGGTTTTTTTAGAAGTTAGCCAATCACAAAATAACATGTCATCATTGCTTATCGAAAAAAAACAAAATAACATGTCATGTTAATTTTATCACAATTACTTTAAAAGTCACTCATAACATGATTTTTGATTAATTGACGGTAGCAGCAATTTCTCAAAAAAATATATCTTAAAAATATTAATTTGATTCACACTTATTATTTCCCAATGACTATTTGTTGTTTTTCAGGGCCAACCTAAGCGAAGCTGATCATATAAAAAATACTCTCTGAAATTATGAAAATGCATTTGGTCAAACAGTTAACTAACAGAAGTTTGAGATTTTCTTTAGCAAAAGCACTACAATTCAGTTGAAAGAGAAGATTGAGGCTATATTTGACGTTACGAAAAGCTTAGCAAATGAAAATACTTAAGATGTGCTTTCTATGATTGGTATGAAGAAGAAGACAATCTTCAATTATCTTTTGAACAAGGATTCATAGTTGGCCATGTAAACATTTGTGTGGAGTTGGTAAAGAGGTGTGCACCGAAGTCTATTGCGCAGTCTATCCCAATGTATTTGTAGGAGTACATTTCTCTTGCGTTCGCATGTGGGAGATGAAGTTGAGCGTATGATGAACTCATTTTGGTGGGTTTCGAAAAGGAATCAAGGAAGGGTATTAACTATTAAGTGACTTAAATGGGAATAACTCACTGTAATAAAACAATTTGGAGGAATGTGATTTTGACATCTATATGGTTTCAATATTGTCATGCTAGGAAAACAATGTTGGAAGCTTAAAACCAACCAACATGCTATTATTTCTAGAATCTTCAAAGTTAAATATTAGGTTCATGGAGACATTGTGGAGCATCCATTATTCTTAGGTGTTGGTTTAAAGAGGCTTATGATGTCAAATTGGTGATGGTAGGAGCACTTGTGTTTGGTATCATCCTTGGTTACCAAAACCTGACAATCCTTACATTACACCTATTGTTCTTGTGAATTATCAACATCTCAAATTTTATCAATTTTTTGTAATAATGGAGAACACTAGAAATTCACCTTATGCATAAATGACATTCTAAAAATTCACCTTTTGCGTAATGACATTTTGGATAGGTAAACTCGAGCTTACTTGAACGAGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACTCGATGAAAAGTGCTTATTATGTTCTCATGGAGTCTATCATAGATAAATCCTATTTGAGAGTTCAAGAACATTGAAATCAGCTTTGGAAAGTTAAAGTCATTCGAAAAATGAAGATTATGACATAGATGGCTTTATGTGGGTGCTTACCATCAAAAATAAATCTTACCTCCAAATGAGTGTTTTGTTTTCTCTTCTGCCTTATAGACCAAGAAGCAGAAGACGTGTTCCATATCTTATTTGATTGCATCCAAGCCAGGTCTTGTTAGTGTAAGACACAACTTTGGTCTGTCATCCAACTTGCTATTTGACAAAACACTGATTTTAATTCTCTTATTTTTGATATCCTTCGGTAGTTGTCCGTTGAACATTACAAAATTTTCACCACAACCTTACGGTGTATTTGGCGCAGGTGCAATGACAAGTTATGGAGAAATTATGTTGTTTTTCCTCATATTGATATTCACTTAGGGCATGAGTACTTAAAGAATTGGGAGCGCACTCAACCTACCAAGAATGTGTTAATAAGAGAGTCAATTGATACTAGTAATGTGAATCTGTCTTGGATCGCACCTGCTGTCGGATCATTGAAATGCAACACTGATATTGTTATTTTTGTATATGAGAACAAGTTCGATGTGGGGTGTTGTATAAGTAGATTTGGAAAACATAAATTGATTATTTTTAATATTTGTGGAATAAAACTTGATTACTTTTTAATTGAACTACAATAATTTTTATGTTAATTATTTTTCATAGCTAAAATGCGGAAAAGGAATGCGAGAACGGACTATATGCACAAAAGATATAACGAGACATTAAGGGTATGTTTGGATGGAGGATTTAGGGGGAAGAACTTGATCTTTAATTCTAAATTGAGGAAGCTATAAAATGTTTCTAAACAAAAATGAAATATGATTAACAATGTTTTATTATTATCTATTATGTTATTCTTTCAATTTTTAAAAATCTCAAATAGATATTAAAATATAGAACAAACCAAACGTAATTTTCACTTTTTGTCTCGAAATAAAACTAAACCGCGCTGCGATATTTACTTCTTCCCCTCCCCCTTCTCTTAATTGGCCCTGTTTTCCCTTATTTGTGGTTTTTCATCTCAGCTTTGAGATACCTTGTTGAAACTCCATAATTTATTGAGACCGAAAATGTAGATTACATGAACCTTGAAAAAAGAAACGGTTATAACGTCGTCTTCATAGTTCTAACTCGAAGCACCAAGGCCCAACCTAACAGATAGTTATGTTTGCTTCTCCTCAATCATCGATTCAGTCCTCATAATATACGAGCAAATTATAACCCACAGACAGCTCCAGAGAACTCTCTGCCTCTCTGGATCTGAAAAGCATTGGGAATATCATTCCCAAAGACGATTGGATGATAATTTTCTGACACATTCTTAAAGTAGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01762.24	Galactosyl_T	129	324	2.00E-34
PF13334.9	DUF4094	17	94	2.30E-08

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT31

Gene Ontology

GO term	Description	Category
GO:0006486	protein glycosylation	Biological Process
GO:0000139	Golgi membrane	Cellular Component
GO:0016758	hexosyltransferase activity	Molecular Function
GO:0010405	arabinogalactan protein metabolic process	Biological Process
GO:0018208	peptidyl-proline modification	Biological Process

InterPro

InterPro term	Description
IPR002659	Glycosyl transferase, family 31
IPR025298	Domain of unknown function DUF4094

trEMBL

trEMBL term	Description
G7KAP6	_

SwissProt

SwissProt term	Description
B3GTB_ARATH	Hydroxyproline O-galactosyltransferase HPGT1

KEGG

KO	Description	Enzyme
K20854	hydroxyproline O-galactosyltransferase HPGT	[EC: 2.4.1.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G53340	Galactosyltransferase family protein
Medicago sativa L.	MsG0580024361.01.T01	_
Oryza sativa L.	LOC_Os08g29710.1	galactosyltransferase family protein, putative, expressed
Cucumis sativus L.	Csa015452	_
Glycyrrhiza uralensis Fisch.	Glyur000143s00011189.1	_
Codonopsis lanceolata	Cl_chr03_52970T	_
Arachis hypogaea L.	AH15G06360.1	Probable beta-1,3-galactosyltransferase 11 like

Expression pattern