| Gene ID | Annotation |
|---|---|
| Am04G001520.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G001520.1 | mRNA | Chr04 | 3992177 | 3997959 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13639.9 | zf-RING_2 | 291 | 330 | 9.40E-11 |
| PF12678.10 | zf-rbx1 | 288 | 330 | 1.80E-08 |
| PF00097.28 | zf-C3HC4 | 292 | 329 | 2.00E-06 |
| PF13445.9 | zf-RING_UBOX | 292 | 327 | 2.40E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0016740 | transferase activity | Molecular Function |
| GO:0036503 | ERAD pathway | Biological Process |
| GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process |
| GO:0140096 | catalytic activity, acting on a protein | Molecular Function |
| GO:0016874 | ligase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| trEMBL term | Description |
|---|---|
| A0AAN9EJ45 | _ |
| SwissProt term | Description |
|---|---|
| HRD1A_ARATH | ERAD-associated E3 ubiquitin-protein ligase HRD1A |
| KO | Description | Enzyme |
|---|---|---|
| K10601 | E3 ubiquitin-protein ligase synoviolin | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G16090 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0580024213.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g19680.2 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa006706 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000051s00003427.1 | _ |
| Codonopsis lanceolata | Cl_chr02_07560T | _ |
| Arachis hypogaea L. | AH11G12680.1 | ERAD-associated E3 ubiquitin-protein ligase HRD1A like |