| Gene ID | Annotation |
|---|---|
| Am04G001270.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G001270.1 | mRNA | Chr04 | 3523386 | 3528840 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13087.9 | AAA_12 | 595 | 795 | 3.90E-49 |
| PF13086.9 | AAA_11 | 397 | 493 | 3.20E-32 |
| PF13086.9 | AAA_11 | 512 | 585 | 3.20E-32 |
| PF13604.9 | AAA_30 | 396 | 582 | 3.60E-11 |
| PF13245.9 | AAA_19 | 415 | 579 | 7.40E-09 |
| PF04851.18 | ResIII | 412 | 550 | 3.30E-06 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | RHEL1 |
| GO term | Description | Category |
|---|---|---|
| GO:0005681 | spliceosomal complex | Cellular Component |
| GO:0005515 | protein binding | Molecular Function |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0045087 | innate immune response | Biological Process |
| GO:0051607 | defense response to virus | Biological Process |
| InterPro term | Description |
|---|---|
| IPR047187 | Upf1-like, C-terminal helicase domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR026122 | Helicase MOV-10/SDE3, DEXXQ/H-box helicase domain |
| IPR041679 | DNA2/NAM7 helicase-like, C-terminal |
| IPR041677 | DNA2/NAM7 helicase, helicase domain |
| trEMBL term | Description |
|---|---|
| A0A2Z6M997 | _ |
| SwissProt term | Description |
|---|---|
| SDE3_ARATH | Probable RNA helicase SDE3 |
| KO | Description | Enzyme |
|---|---|---|
| K18422 | helicase MOV-10 | [EC: 5.6.2.5] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G05460 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Medicago sativa L. | MsG0580024182.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g06440.2 | RNA helicase SDE3, putative, expressed |
| Cucumis sativus L. | Csa007535 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000051s00003385.1 | _ |
| Codonopsis lanceolata | Cl_chr08_22860T | _ |
| Arachis hypogaea L. | AH15G08050.1 | Probable RNA helicase SDE3 like |