Gene detail

Detail information of Am04G000930.1 Annotation

Gene ID	Annotation
Am04G000930.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G000930.1	mRNA	Chr04	2921416	2923767	-

Sequences

CDS:

>Am04G000930.1
ATGGGTGAAATAGCTTACACAAATGGTATTACCAATGCCATTAATGGATCAGTCAATGGAAAAAATCATTCACCTAATGGTTACAGGAAGAGCTGTTGGTATGAAGAAGAGATTGAAGAGAACCTTAGATGGTGCTTTGCTCTCAATAGCATTTTGCATACTGGAGCTAGTCAGTACCAAGACATTGCATTGTTGGACACAAAACCCTTCGGCAAGGCATTGGTACTTGATGGGAAGCTTCAGAGTGCAGAGACAGATGAATTTATCTACCATGAATGTCTAGTTCATCCATCTCTTCTTCACCATCCTATGCCAAAAAATGTTTTTATTATGGGAGGAGGAGAAGGGTCTACTGCAAGGGAACTGCTCAAGCATAAGACCATAGAAAAAGTTGTAATGTGTGACATAGATGAGGAGGTGGTGGAATTTTGCAAATCATACCTAGTTGTAAACAAGGAAGCATTCCTTGATTCGAGACTTGAAGTTGTAATCAATGATGCCAGGGCTGAACTTGAAGCTGCCAAAGAAGGGAGCTATGATGTAATAATTGGCGACTTGGCTGACCCAATAGAAGGAGGTCCTTGCTATAAACTCTACACGAAGTCTTTCTATGAGCTTACTCTCAAGCCAAAACTGAAGAAAGGTGGAATATTTGTGACACAGGCAGGGCCAGCTGGAATATTCAGCCATACTGAAGTGTTCTCATGTATTTACAACACATTGAGACAAGTTTTCAAGTATGTTGTGCCTTATTCAGCTCATATCCCATCTTATGCTGATATTTGGGGATGGGTCATGGCTTCAGATTCTCCATTGGACCTGAGTGCTGAAGAACTAGACATCAGAATGAAACTGAGGATTAAGGAAGAAAATAGATATCTTGATGGGAAAACATTTTTGTCAGCCTCAACTTTGAGCAAAGCTGTTCGTAATTCGCTGGACAATGAAACTCATGTATACACAGAGGGAGCAGCTAGGTTCATATATGGTCATGGCAAGAATGCATAA

Protein:

Promoter(3k):

>AM04G000930.1
AAAATTGTCTTGCGTTGTCACTCTAAAGTAAGAAGAAGAATAAGAGAGCGAGAGGAGGAGAGAAGATGAAAGTCTGTATTATTCTCTTCACAAGTGTACGTTTACACTAGGGAGTGAGTCCTATTTATAGGGTATAAATTGGCAAGTGAGTGATCAATAATTAAAAGCCATTAACACTTCAATACTAAACACACAAAAAAACTCAATTACTAAAGAGACTTAGTGGAATGTGGAAGCCTAAGGATGGACATCTATTAATTCAAATTTGTGGTAGGTTGCTCATTGCAATCCTAGGATTGATGAATACTAGAAAAGTGCAAAAATTGTCTTGCTTTGTCACTCTAATTTTCTTTATCCCCCCTATTTGCAAAGAGAAGAAAATGAACCTTTCATCTCCAAATTATCGTTGATGATAGGCTTGATTGGGATCAGGATCCTCTCCATTTAATGGAGGGTTCCATTTGGAGAGAGAGTGACACAATGAATATTTTAATATTATTTTAAAAATAATATTAAAATATTCAGTGTGTCACTCTCTCTCCAAATGGAACCCTCCATTAAATGGAGAGGATCCTGATCCGCTTGATTGTGGGTATGCACGTCATGTCAAGAAACTCCAATTCATTGTTAAACCACTTGCATCTAATTGATAAAAAGATCGGTGGGCGGATCATACTTAAAGCACAGTGTCTACACAATTTTTTTTGCACATTATTTGTTTTCTTTCTTGTTGCATAACCATCACCACACCAATCAATATCAAAGGAGAAAGTAAAGAAACAATCAACCAACCGATATCACCATCATTTGAGGTGTCAGCTCAGTGATAAGAGTTTGATCTTGTAACCTCAAAAGACGGAGTTTAAATTTCCTCAAGGACGATCGTAAAATGACCATTAGTGTTACTTTAATTAATAATAAATTCACCTTTCCCAACTAGAAAAAAAGGAAACAAAAACGCACCCGAAGGAATAGACAGGCCGTGTATAAGGCAAGGCTATTAAGGCTAATGCCTTTGGCCTCATTTTTTTCTTTTTATTTCTGTCTATGTATACTTAGTCTATCAAATGAAGAAAAATATGATAGTTTATTCTAGAGACTTAGATAAAGTGTATTGTTATTGTTACAAGTTACTTTGTACAAGTGATGTTAACTAGTCAATTAGTAAATAAAGAGACTAGAGAATGGAATATGCAAAATCATACATGTAATAATGCTTATAAAATATTAAACAATACTTGTAATTGCTACTACTAAAAAGGAATTTTTCAAAATTAAAATTGCCTAAATCTTGTGTAAATCTACAATTTTGATTTTGTAACAAGATAAATTAGATGTATTAATTATCTTATCTACTAAGAGTGAAAATTAATATGAAGACATTGTAGCGTGTCTCTTTAAAAGTTGCGTGTCTCTTTAAAAGTTTCGTCTTAGGCCTCAAAATTGCTCTACACGGCCCTCAAATAGAACACCCAAATCATGAATCCTCATTGTATTTGTTGCACACTTCATAATTTGTTCTTCATCTTGTGTCTATAAGTGAAGAGACAAGCAGCCTCATAGCTTTTGGCATACAAAAGGTACTATGATTCACAAGGCCAAATAGTTTTGGTGAAATGATATCTAATTATAGCACTGTATCGCGAATGGTAAAGCCTAATAAAATGGTCGGGTCGGCATTCTTGTTTCAATCCTTACTTACGTACTGTTAGTTTTATATTCAAACATTTCATGTAACAAATCAAATTCACCCAAGTAGTACTAATGCAATAGATTAAATAATAATATTAAAATTTGAGCATAATAAATTGCGACACACGAGGAAAGTGAATCCATCATAAGTCCCCCATAACCCGCAACCAACATGATTTCTTCTATGAATTCTTCTTCTATTCATGGTTGTGTTGTGTTGTGACCACGAGCATTAGCAATACCCCTCCCTCCCTTGTTAATGTGGAAACATCATGCTGATGCCAACCTTACATCAACTAACTATTAAACCTTACCACACTTTGGGTGGGACCCACTGACAAAGTGAAATTATCCAACGCAACATCATAACATAAGGTGGTGAGGTGAGAAAAATGATGAGAGTAGAGGAATGGGAAATGGTTAAATTTTGTTTGTTACGGTGTGGTTGAAAAACTTGAAATGAAAAATTAATTGATGGTGATAGTGATGATGAGTAGAGTAGTTCTGGCAAGGCACGCGTAGCTCTCCATAGCTTTTTGAAACAACAAAGAGAATATATATGATGATCTCCATAGCACGCTCTCTTTCTTTTGCACACATTTCCGAAGTATTTCTTTGTCTCTCCCACAATCATCATTTTAAATACTTCTAAATACCACTTTCATTTATATACATATACAGTAAGTACTCCATCTCATCTCCTGCGTTGCGTGACAAATTTCTGCTGCATTAGCATCATTACATTACATTACATTACATTATATATCATCATTCATGCATGCCATCAAGTATACCACACATGGAATGGAATGGAATGGATATTAACCTTCCATATATTAGAGCTGTCAAATTTTAGTTTTAACTTTTAACTTTTAACTAACTAGGCTGCAAATTACCCTTTGATTACTTATATACTTTTGTTAAACAAGTTGATAAAGTGAAAGTTATTATAGTAGTAAGATAAGATACGGGCCTAACTAGGTAGGAAGGGTATGATTATGATATCAATCTCAGAAGTCCCGCAGGCAGAAGATATATATGTAAATCTAATGTATTTTCTACTTTACGAATTCCCATGAGGATTTTTGCTTTTTTCAAGTCTGGGACTGGAAGAGCACGTCCACTTTGCTAGATAGATATATTTCCCGGCTATCAATAATTGTCCTTCCCTTTTCATTTCTCTACTTATATTCTCATTCTCATATCCATTCCATACACCACCACCACCACACTCACTACTCTTCTCTTCTCTCTTCTTCTCTTCTTAGACAAACACCCCAACCCCACTTTACTTTCTCTTGAGCTGTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01564.20	Spermine_synth	87	266	8.10E-42
PF17284.5	Spermine_synt_N	33	84	3.10E-14

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0010487	thermospermine synthase activity	Molecular Function
GO:0004766	spermidine synthase activity	Molecular Function
GO:0008168	methyltransferase activity	Molecular Function
GO:0016874	ligase activity	Molecular Function
GO:0032259	methylation	Biological Process

InterPro

InterPro term	Description
IPR001045	Spermidine/spermine synthases
IPR037163	Spermidine synthase, tetramerisation domain superfamily
IPR035246	Spermidine synthase, tetramerisation domain
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily
IPR030374	Polyamine biosynthesis domain

trEMBL

trEMBL term	Description
A0A2K3PCR2	_

SwissProt

SwissProt term	Description
ACL5_ARATH	Thermospermine synthase ACAULIS5

KEGG

KO	Description	Enzyme
K18787	thermospermine synthase	[EC: 2.5.1.79]
K00797	spermidine synthase	[EC: 2.5.1.79]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G19530	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Medicago sativa L.	MsG0580024129.01.T01	_
Oryza sativa L.	LOC_Os02g14190.1	spermidine synthase, putative, expressed
Cucumis sativus L.	Csa013092	_
Glycyrrhiza uralensis Fisch.	Glyur000094s00007856.1	_
Codonopsis lanceolata	Cl_chr08_24710T	_
Arachis hypogaea L.	AH19G41660.1	Thermospermine synthase ACAULIS5 like

Expression pattern