Gene detail

Detail information of Am04G000680.1 Annotation

Gene ID	Annotation
Am04G000680.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 25

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G000680.1	mRNA	Chr04	2418065	2424309	-

Sequences

CDS:

>Am04G000680.1
ATGGTTACCTCAAAAGCACTTGCCTCCCTCTCCCTGTTTGCGGTGCTATGTTTAGCAACACAAGTATCTTCCGTTTACATAGGCTCTTACTGCAACGACAACGCGACATACGCACCCGACAGTAGACTAGGTACCAATCTCAATGTCCTCCTTTATTCTCTCACCACCAACGCCTCCCAACAACAAGACGGTTACTATTCAACCATCATGGGTTTTGGAACAACCGACGCAGTCAACGGTTTGTTTCTCTGCCGTGGAGACATCAACACCACCTCCTGCGAAAACTGCGTAACCGACGCCGTCAAAGAGATCAAACGCCGTTGTCCTAACCAAACGGAGGCCGTTATCTGGTACGATAAGTGTTTGTTGCGTTACACCAATAAGTATTTTAGGTACTATAGCATCGAACCCCGAATGAATCAAAAAGACGGTAAAAACATCTCTGGCGTTGACTTTCAACGGTTTAATCAATCAGTGTTCGGGTTGTTGAGTCAGGTGGCAACGGAGGCTGCGAATTCAGCATCGGCGAAGAAGTTTGCGACGGGGGAAGTGGAGTTGACGAGTTCTCAGAAGGTGTATGGGTTGGGGCAGTGCACCACTGATTTAACAAATGGTCAGTGTGAGATTTGCTTGAGAAACGCGATGGGAACTCTTCCACTGTGTTGCAGCGGTCAACGAGGTGCAACTGCTCTTCTTGCTTCCTGTACTCTCAGATACGAACTCTACCCGTTTTACTCTCTTGTTACCGGGACGCCTCAATCCTCATCTTCTTCAGTTGGGGATGAACTTGAAACTTTGGAGTCATTACAATTCAGTTTGGCTACAATTGAAGTTGCCACAAACAAATTTTCACAAGAGAACGAGATAGGCAAGGGAGGATTTGGTGTTGTTTACCAGGGTGTTCTCTCAGATGGACAACAAATTGCAGTAAAAAAACTTTCAAGAAGTTCGGGACAAGGATCAGTAGAATTTAAAAATGAAATTTTATTAATAGCCAAACTTCAACATCGCAATTTGGTGACTTTATTAGGATTCTGCTTGGAACAGCGGGAGAAACTACTTATATATGAATATGTGCCAAATAAGAGCCTTGATTACTTTCTATTTGATTCCCATAAGCAAAGGGTGTTACACTGGTTTGAGCGCTATAAAATTATTGGAGGAATAGCACAGGGGATGTTTTACTTACATGAGCACTCACGACTTAAAGTTATACATCGAGATCTCAAACCTAGCAATATATTGTTAGATGACAATATGAACCCCAAAATATCAGATTTTGGTATGGCAAGAATAATTGCAATTGATCAAGAACAAGAAAATACTAACAGAATCGTTGGAACATATGGTTATATGTCTCCCGAATATGCAATGCATGGACAATTTTCTGAGAAGTCAGATGTATTCAGTTTTGGAGTCATAATTCTTGAGATCATAAGTGCAAAGAGGAATACTCGTCCTATTGAATCACACGATTTTGAAGACCTCCTAAGCATTACTTGGAGACAATGGAGGAATCAAACGCCATTACAAATATTGGACCCCAATCTAAAGGACATGTTTACTCATGGTGAAGTTGTTAAATGCATTCAACTTGGTTTATTATGTGTTCAAGAAAATCCAGATGATAGACCTACAATGGCACAAGTTGTTTCATATCTTAGTAGTCTTTTAGTTGAATTGCCGCTTCCTCGAGAACCAGCATTTTCCATGGATATGGGAATGCAGTTAAACATAACAACAGATTCGAGTTCAAGTCAATTAACTAGTAATTCTACATCACTTTTCCCTCGATAA

Protein:

Promoter(3k):

>AM04G000680.1
AGTGGATGGATTGGATATCCATCCATAAAAAAGTTGTTAATGGAAGACTTGGATGGATTTTTTTTGTCCATGGATGAATTGGATTGGATTTGTTTGATACAATCCTAAGGGTTTTTTTTTTTGTACCCCCATCAACTCTCATCTACCCCCATCAGCCCTATGAAAATACCAAAATACCCTTAAAATTTTGATAAAATTACAAAACATTTATCATTTATCACTTGCATCCGTTTGACCAGAAATTTTCTAGAGATTATCGGATTTAACCTTCAGAGATACATCCGATTTCCCATCGGACTTACGCATCGAACGTAGCTATATCCGATCCACACATCCGCTTCGTAAACAAGTGAGTCGGAATTACGTAAATCCGATTCTCCAAACTACGATAAAATTACTAAACACGTGTCAAAAAAATTTAAGGTACCATAAAAATACTAAACACTTGTCAAAAAAATTTAAGCTACGATAAAAATACCTATTGGTGGTCTGATTCCCGAAGTGTGGGATCTGGTTTGTCCATGCCAAGATAAATCTTTCCTTGTGCTTTGTCAACCACGTGTCATGCACATACTTAATAAGAGCGGGCAAATCAACGCAGGAGTCCTCAAAAATCTTCAAGTGACCTGAGTACTCTGACTCGTCAAGTGAATCAATAATGTTATGCCAAAGACAGACGACGTCCTTTTGCCTATCCACGTGCACCAACTCTTTAATCTTCGCTTTCACATTTTTAGTCACGTGCCACGAACATAACAAATTTGTAGCGGAAGGAAAGACATCAACAATACCGGACATAAGACCAAGATCTCTATCAGTCAACAACACCTGAGGCTGAAGTCCGTGCAAGTCAAATAATTCTTTTAGTAGCTGCAATGCCCAAGTAAAATGAATTCCAAGCTCGTGTGAAATATAGGCAAAAGCAACCGAGAAAGTTAACTCCGTTGAAGTGACACCTACAATCTCCAATAGAGGTAGATTGTATTTGTTGGTCTTGTAGGTGGTGTCAAGAATAAGAACCTTTGGAAACAACCGGAATAACTTAATAGAAGTGGGATGCGCCCACATGATGTCACTGACCACATCGGAACCCTCAAATTTTCTGCTCCAACATAAATAATTTTGCGTCTCAATCAATCTCAAAAGCTCTTGAATGTCCGTTCTAGGACCCCTCTTAGAAGACCTATAGGCGTAACGCTGCCTATATATTTGAGGAAGAGAAGTGACGTTGTCCGGATAATGGTTCTTCAAAGCAGTAAGACAATCTTTTGGGGCAACATTCAAATCAGTGTGCTCATTAACAATAGCTTTCTGCGGCTTAGTTAAACGACCAAAAGCTGTCGACCCAACCGGGGTAGTAAGCAACTGATGTGTGTGAAGACCACACCTAACACTAACACGCCAACCCCCATGACGTTTTGTACAAGTAGCTCTCAATGTAAACGGACAGCTTCTTCTTTTAGACCCGAAAACTCTAGAATCATTAGACCAATTCCCTTGCTTCTCGCAACCAAATATAATCTTATCTCTAGAACCCCTTTTACCTCCAGCTTTGTCAGATCTTACGATGATAACCACAACTCCAATACGCCTCCCAACTGCGTTAGCCCACTCTTCAACATCCTGGCGTGTAGAAAAAATCTACAAAATAGAAGAAATAGATAAATGTTGCGTACTTAATTAATTAAATATCTACCAAACTTTAATTAAGAAAATTGGTTTCAAAAATATACCCTCTCTGTCCAGAATGCCTCTGTAGTGTCTACCACGAAAGGAACGACCTGCGACTCTGTATTCACAATACCTGTTTCAAAATAGAACAACAGTTATAAAGTAAATAATTAAAAATAAAAAAAACAAAGCGGATTTAGGTGACTTCAAACGTAAATCCGCTTTCTAATTTTTACAAATCGGATATAGCTTCATCCAGGTATATCCGATTTGTTAAACAATAAAGGCGGATTTAGCTAAATCCGATTTCGCATCGGATTTAGCTAAATCCGATTTGTAAATATTTCGCCTCAGAATTAAATCGTATTTAAAGCTAATCGGATTTACCTTCCATTTAGGTAAATCCGATTTCCAGATTAAGTGGTCCCCCACCAGAGAATCTTCCAAAAGTCAATTTTTGTAATTTATGTCAGGGGTATTTTTGGAATAACGTTTTTGGGTGGGGGTACATGGAAGCTGATGGGGGTATAAAAAAAAAAAACCCAATCCTAATGGATATAAATTTTTTAATGGATTTCTCCAATCCATCCATTATAATCCATATCCATATCCATCCAATCCATCTATTTTGACACCCCTAGATTTTTTCCCCGTTGCTAGTGGTCATGCCTGAAGTTTGACGTGCTGTGCTTGGCTCCCTGCGTAATTGTGTCTTGTTCGGTCTTTTTTCTTTTCCTTTTTATTTGTAACTCACACACAAAAAAAATATAAATTTGGAATTAGCGCTATTTTTTTTGTTGACAATATTGCAATTTCTTTTGATAAACATATTATCGCATTTGATACAAGTTACGTTAAGTCGAGACTTCACATTAATATATGTCTGATCATGACATAAAAAACAAAAAACAAGTTAATTCAGCAAAAAAACAAGCTAACCTCTTTCCGTTTTTGTTGAAATGCACTAAATTGTTTTTAATCGATTGGACCTATTGCTGTTTGCACCGTAGAATATTTCTAGTGTGTTCCAACAAGTAGAGAGAGAGAGAGAGGCAAACAAGTTAGTCTTAAAGTATTTGAATACAATACCTTAAAAAATTGTCTCGTCCAAACACACTCCAGGAGAATGCAAGAAATCAACAAAAGATGACATGTCTCATTTTGACAGCTGCAGTTTTTCAACTTTGGTATAAAATTCTTGGGGCTCAATAGTTTATCATTGCCGGGTCAAACATAAATGTCTCAAATCAAAAAGACATTTGTGTTAATGCATCCATCCTCCATTAATCCATTTAGATCAAAGAAGACGACCAAAAAGAAAACAAAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	284	552	7.20E-50
PF07714.20	PK_Tyr_Ser-Thr	285	554	3.80E-49
PF01657.20	Stress-antifung	31	127	2.30E-33
PF01657.20	Stress-antifung	153	242	2.30E-33

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.7.2:RLK-Pelle_DLSV

Gene Ontology

GO term	Description	Category
GO:0042742	defense response to bacterium	Biological Process
GO:0004674	protein serine/threonine kinase activity	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0019706	protein-cysteine S-palmitoyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR038408	Gnk2-homologous domain superfamily
IPR002902	Gnk2-homologous domain

trEMBL

trEMBL term	Description
A0A8B8LZ51	_

SwissProt

SwissProt term	Description
CRK25_ARATH	Cysteine-rich receptor-like protein kinase 25

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G05200	cysteine-rich RLK (RECEPTOR-like protein kinase) 25
Medicago sativa L.	MsG0580024085.01.T01	_
Oryza sativa L.	LOC_Os07g35390.1	TKL_IRAK_DUF26-lc.17 - DUF26 kinases have homology to DUF26 containing loci, expressed
Cucumis sativus L.	Csa014295	_
Glycyrrhiza uralensis Fisch.	Glyur000704s00022934.1	_
Codonopsis lanceolata	Cl_C16713_unscaffolded_00010T	_
Arachis hypogaea L.	AH09G27030.1	Cysteine-rich receptor-like protein kinase 10 like

Expression pattern