Gene detail

Detail information of Am04G000540.1 Annotation

Gene ID	Annotation
Am04G000540.1	kinase associated protein phosphatase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G000540.1	mRNA	Chr04	1974663	1982548	-

Sequences

CDS:

>Am04G000540.1
ATGGGTACGATGCTACAAACCATTCTTCTTCTCCTTATGCTTCTTCTCATCATCATCTTCCTCTTCTTCCTCTTCAAACCATGGCGCTTCTTTTTCTCTTCTCGCTTCCGCTCTCTCATCAAGGGCGGTGCTGGTGCTGAGTTAGAGAGACCCCTCGTTGGAGACGATATTAATGTAAATGTATCGTTTAATCAAAACAATGAATTGCCTAGAGATTATGATCTTGAAGGTGCGTGTTATCCCAATGAAGTTCATTTTCGATCACCTCGTACCCATGGACAAGGACTTGTTCATAAGCAAAGGTTTCAAAACCTTTCCGTTTCACCTGCTATGCCACAAGGTGATACTTTGGTTGTAGATGTAATCTCTGATCTTTCTGAAGATGTTGATGTTAATCATACACTTAAGACTCCTCCTCCTCCTCCTAATTTAGCTCAAATTCATAAGCACACCTCGCCCAGTCTTCAAAATGATAGATTGCAGGACTTTGTGCATAGAGATATTACTGATCAAAGAAGTTGTCTCACTCTGGAGGTTATCAGCGGTCCTTCTCGCGGACAATGTTGTTCTGTACAGTCCACGAATCCCTCTCGTCTACCGCTAACCTTGGGAAGAATTCCTCCCAGTGATTTGATGATAAAGGATTCAGAAGTGTCGGGAAAGCATGCGTTGATAAAGTGGAATTTGGATAAGATGAAATGGGAGTTGGTCGATATGGGTAGCTTAAATGGGACGCTGTTGAATTCTAAGCCAATCAACCATCCAGACACCGGAAGTAGGAATTGGGGAGATCCGATGAATCTTGCTAATGGAGATGTTATAACACTTGGAACAACATCAAAAATAATTGTTCATATTACTTCACAAGTTCAGCATCACATTCCCTTTGGAGTTGGCATGGCATCAGATCCCATGGCTTTGCGTCGAGGCGGAAAAAAGCTTCCTATGGAGGATGTTTGCTATTATCAGTGGCCTCTACCTGGGCTGGATCAGTTTGGTCTTTTTGGCATTTGTGATGGGCATAGTGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTTCCTGAGATAATTGCTAGAATATTATCGGATTCATTAAAAAGAGAGAGGGTTTTTTCTCTTCGTGATGCTTCAGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCACTCATGAATCACTATTACGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGACTGACCGCGATGAAAATTTCTTTGCACAATGTGCAAACGTTGGGGACTCTGCCTGTATTATGAGTGTTAATGGGCAACAAATCAAGATGACAGAAGATCACAAGATAGCAAATTATTCGGAAAGACTCAGAATTGAAGGGATGGGTGAACCATTGAAAGATGGTGAAACAAGGCTATATGGCATGAATCTTGCAAGGATGCTTGGCGACAAATTCCTAAAACAACAGGATTCTCGTTTCAGTTCAGAACCTTATATAAGCGAGGCCGTCCATATTGACAAAGCAAGCCAGGCTTTTGCCATTCTAGCTAGTGATGGGTTATGGGATGTCATAAGCGTTAAGAAGGCTATTCAGCTAGTGCTCCAGATGAGGGAGAGATACTATACAGAGAGAGAGAATACAGCAGAAAAGATTGCTAGTTTGTTGTTGAGTGAGGCTAAATCAAACAGAACAAAGGATAACACCTCCATAGTTTTCTTAGATTTTGATACCTTTAACAGGTTCTCTTGTAAAGTTGAATCCTAG

Protein:

Promoter(3k):

>AM04G000540.1
GTTCAGGTTTCATGTTTATACGACAAGTATTCGAGGAGTTATCAACGAAACATTGTGACTGGTCCAAAACTGTCACTGATTCAAAAGTGAAACTTGTAAATAATTGTTCTCCCACAATACTCAGTCAAATTAGGTGGTTCTTGTGCGAAATTTGAAGGGTTTTGTGTCTAATTTCTAAAGAAAGAAAAACAACATTCACAGGAGGTCTGTAGATGGAGTTATATAGAAAATACCAAAGGTGGTACAAACAGGATTTCTGCAGAATTTCGGATGAACTTGTATCTTCAACCCCCAACTTCAAATTTCAACTCCAACAAGCTCCAAACTACCCCAGCTACCAAACCTTCTTCCTAATGCTTCCAATTAACCATGTGGGTTATGAAGTACTCTATTCTAACCCTATACATGACATGCAACCTTCAACAATTCCAAAACTCCATAACTAGCATTTTGAGTTTTGAGGTGTGAGAATGGTGATTTGAGTAGGAGGAAGATGTAGATGGTGATATTAGTATCAATAGGTAGAGGATCAGAAACTGAGTCTAATGGTGAAGAGAGATGTAACATGCATCAAGCTTTGGTTCTCTCTCCTTCTCTTCTCCCTCTTTCCCGAGCTCTTTTTCTCTCTCAAGCTCTCTCTCCATTTTTCTTTCTAAAATTCTGTTTTGTGTTTTCTTGTGGTGTGGGTGTTGTGTTGTTTTTTATGAGAGTGTGTGATGAGTTTAAGTGAATGGGGTCAGCCGAAGGTAAGGTAATAAAATGAAAGCAAAATGACTGTTTTGCCCCTTGTCTTATTTATTCACTTAAAACTCTTTGTTAAACCCTTAATCAATCAATAAAATACATAATTCACATCATTTAGTAATTAAATTAACTATCACCTATATTCGAACACTAAAGCACTGACATTAGATAATTAAATAAATATGACCTCTTGCTAATTTAGAATAACGAGATTAGCCAAATTGGGGATGTTACATAAAGCATTATATATCTCTAGCTAAGGTACGAAGAATGTCTCAAGATTCATAACAATGTTCGTTATCTAGATAAACATAGAATCCCGTTAGCCTCCAAGTTCGGTACCCCAATTGTTTCACTTCAATATTTATAAAATTTTGAGAGTAACTCAGGATATTACGATCAAAACATGACGCCAAAGGAGGGCCAAACCACCACTCCTACCAATTTTATCCACTGCAAAAGCCCCATTAAAATTTAAATGAACTCACATTTCCTCAATTCTACTAAATTGAACCACTGCAAAAGCCCCATTAAAATTTAAATGAACTCACATTTCCTCAATTCAACTAAATTGAACCAGATTTTCGCAAAGAAAAACAACATCCGAACGATAAGTCTGAACAATGTCTTTGAGAAAATTAATTGTCCTTGGGTTACCCAAGCCTCGACAATTCCAGTTGGGAATACTCATTGAGGGCACTAAACAACACTAGACTTTTTCGAAAACTCACTCACTCACAAGAAGAACAAATAACAATTATCACACCACAAGCCATACAGTGACATAATTCTTCGACTCAGATTCAGAAGAAAAAGACCCAAAATCATGCCCAAAATAACAAACCCCAAACCTCTAATCTTTAAAAAGCCTGAGAAACAAGACGAATCATGCAATCAAACAAATGCCACAAATTGATCAAGCAATAAATAGAATGAATATTGAAACACACACTTACCATTTGGAATTTCTTCATCCCCAAAACCTTGCCCCCATTTTTTTGGTATAAACCGAGTATCCTCTAAGCACAACTGCAAATACTAATCTCTCGAGCCAGGTAGGACCACAATGAGTGACAAAACTCTCTCTCAAGAGATTTAACACTACTGCATGCCCAAGGCTGAATTTGAACCTAGGACATTGGTTAAGCTGGAAGAGACTCAAATGATCTCATCCAACCTAACCCCCATTTTGAAGACCATTCCTGCGATCAACTTTTAGATACATGACTAGCATATTAATTACATCATGAAAAATCAAATTCAGTCACAGCCCTTGATAGTTTCCTTGTGGCTTGGTGGGAAGGATTTAAAGGAATTTACTTATATATACAAAGTTTATTTAAAATGCACACTTTCTTATTTTTAGCACATTTTTTCCTTTTATATTGTGATTCATACATAACTAAAACTAAGGGCCTAAATAATTAAAATATTATTCGTGTTAGCAAGTTGACCTAGCCATCACGACTAGTCTGTGTTGGGCCAAAATGACCGTGGGCCTAGCTATATTTTTCTACGCAAGCCAACATTTTATATTAGTGTAATTAATGAGTCAACCTATCGAATTTGACCCATTTGAAACCCTAGCCCCCGACTTTCTTCTATAAAAGGTCTCATCTTGGGGATACCTCTTGCCTATTCAGCACTTTTACCGAATTTGTTTACCTATGCAATACAATGTCTCTCTGCTGCTCTCGATAATGGATTCTCCCCATTTATTCTCCTCCTAATCCAATATCGCTTCAATAGCCATCATCGATCAGGTACCAATTTAGTCTCGTTATCTCGTAAATAAGTCATTTTAACTATTTTTTTCTACCTGAGTTCCCAATAGATCATTTATTTTCAACATTTCAATTGATTTGATTCTTCTATTTGCGTAACTAATTACATAACGAGAAAAGATTCGATGTTTCTTTTTCAGAAGAGAAGAGTAGTTAATCTTATTTATATGTGAGTCTCTCTTATTTATTTATTTATATTTGTACATCTCTCTTATTTATTTATTTTTCATCTGAGAAATGCATTAGTTGATGACTATATAGAAAAGAGGTAAAATTGAAGGTAATTATTATTATATATATGATATATGATTTATGATTTATTTCCTTGATTTTGAATTCGTAAATGTTAATTTGGATGGAAAGGAAAAGAAAAAAAAATTGTGACTGACCATTTCAAAGCGAGGTTGTCGCAAACCCAAACCCAATCTCTAGTCTCAAACGAAGGGGAGAGAAGGAAGGAAGGAAGGAATCG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00481.24	PP2C	308	562	2.10E-48
PF00498.29	FHA	202	277	1.90E-17
PF16697.8	Yop-YscD_cpl	178	282	8.00E-08

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0007165	signal transduction	Biological Process
GO:0071944	cell periphery	Cellular Component
GO:0043169	cation binding	Molecular Function
GO:0019901	protein kinase binding	Molecular Function
GO:0016301	kinase activity	Molecular Function

InterPro

InterPro term	Description
IPR008984	SMAD/FHA domain superfamily
IPR015655	Protein phosphatase 2C family
IPR036457	PPM-type phosphatase-like domain superfamily
IPR001932	PPM-type phosphatase-like domain
IPR000253	Forkhead-associated (FHA) domain

trEMBL

trEMBL term	Description
A0AAN9JZH8	_

SwissProt

SwissProt term	Description
P2C70_ARATH	Protein phosphatase 2C 70

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G19280	kinase associated protein phosphatase
Medicago sativa L.	MsG0580024114.01.T01	_
Oryza sativa L.	LOC_Os07g11010.2	protein Kinase-associated protein phosphatase, putative, expressed
Cucumis sativus L.	Csa007830	_
Glycyrrhiza uralensis Fisch.	Glyur000094s00007839.1	_
Codonopsis lanceolata	Cl_chr08_15100T	_
Arachis hypogaea L.	AH15G08810.2	Protein phosphatase 2C 70 like

Expression pattern