Detail information of Am04G000040.1 Annotation
Gene IDAnnotation
Am04G000040.1 histone deacetylase 1
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am04G000040.1mRNAChr04156409166932-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00850.22Hist_deacetyl363245.50E-85
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0006338chromatin remodelingBiological Process
GO:0005634nucleusCellular Component
GO:0006357regulation of transcription by RNA polymerase IIBiological Process
GO:0046872metal ion bindingMolecular Function
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR023696Ureohydrolase domain superfamily
IPR000286Histone deacetylase family
IPR037138Histone deacetylase domain superfamily
IPR023801Histone deacetylase domain
IPR003084Histone deacetylase

trEMBL
trEMBL termDescription
A0A4D6LSP2 _

SwissProt
SwissProt termDescription
HDA19_ARATHHistone deacetylase 19

KEGG
KODescriptionEnzyme
K06067histone deacetylase 1/2[EC: 3.5.1.98]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G38130 histone deacetylase 1
Medicago sativa L.MsG0580024036.01.T01 _
Oryza sativa L.LOC_Os06g38470.1histone deacetylase 19, putative, expressed
Cucumis sativus L.Csa007764 _
Glycyrrhiza uralensis Fisch.Glyur001864s00033368.2 _
Codonopsis lanceolataCl_chr01_30630T _
Arachis hypogaea L.AH11G07930.2Histone deacetylase 19 like

Expression pattern