Gene detail

Detail information of Am03G037350.1 Annotation

Gene ID	Annotation
Am03G037350.1	peroxin 5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G037350.1	mRNA	Chr03	185984047	185998072	-

Sequences

CDS:

>Am03G037350.1
ATGGCGATGCGTGATCTTATCACCGGTGCTACTGCTTGTCCTGACCCTTCCGCTTCTTCCTCTTCACAAAACCCTCTCGGCGCTCTCGCTAACGTCCTCATCGGCTCTTCCTCCAAGACTCAGGAGAGGTTGAAGGAAATTCCTACATCGACTTCTACTGGTGTTTCCTCGCAATTTTACTCCGAGACTCCTTCTCAGCTTCCAGGTTCCGAATTCGATAAGCCTTTTCTCGATGCTAACTCTCAGGGTTCGGCGTTTTTGAATGGGTTTCGGTCGGCGGGTGCGGGTGGGCTTGAGGAAACATGGGATGAGATACAGCGTGAGGGGACTCAAGCTCAACTGCGCCTCTATGATAGGGGACCGCTTCCACCACAACTTAATCACCCCCCTGCACTGGATGGGACACCACAGAGAGTTCTATCCAGCTTTTTGCACTCATTTCTTGACAGCAGTCGTGGTGGAATACCTTTTCATCCTGCCCCTCTTCCAGTATTGGGTTTATCTGACGGTGATAAACAATGCATACGTGACCGTAGCAGCATAATGGCCAGGCATCTCTTTGCAGATAAAAGTGAAGACTTTATAAATGCCCAAGTAAATGCCCTTCTATGCTCACTAGATATTGATAGCAACGTCCGTGGTAAGGGACCTATGCCGGAAAGATTTCGAGAGCTTGAGGATTATTGGAACGAGTCTCAAAGCAACGTGAGGCATGGTGCTCATGCTGCAGATGGATGGATTACCGAATACAGTCAAACAAGGGAAAGACATGATAATCCCGATTTTTGGGCTAACTCATTTGAGCAACAGCATGGTGCAAATGGTTGGGTCTCTGAATTCGAACATTCTCAATTGTCATCAGTAGATCAAATGCCAGGTATGAACATGTCAAACTTTGCTGCAATGGAGCAGACTCGTATGCTTGCAAATACATTGGCGCAGAATGCTGACCCTAAATTTCAGAACTCGAAGTTCCTTCAATTTGTATCAAAGATGAGCCGTGGTGAGTTGATTATTGATGACAATCAAGTTAAAGAGACTGCATTACCTGCATATGGAGATTGGGCAGCAGAATACCAGCAGCATCATAATTCCGGGAATGCATGGGCTGGCGAATTTTTGAATGATAAGGTTTATCATGGACCTGATCAGTGGGTGAATGAATTTACAACTGAAAGACAGCGACATGGGGCAGTTGATGACCAGTGGGTTGATGAATTTTCAAAGTTGCATGTTAATGACTGGGCAGATGAATTTGGTCAGCAGGTTGGTGAAGGAGTCTTTGGGGAGAGCAACGATAGTTGGGCACAGGCATATGATGAGTTCCTAAATGAGCAAGTTGCAGCCAAGCAGCGGTCAGATAGTTCAAGGGGCGTGTATGTCTTTTCAGATTTAAATCCTTATGTCGGTCATCCAAATCCACTAAAAGAAGGCCAGGATCTCTTCAGGAAAGGACTTTTAAGTGAAGCAGTTTTGGCATTGGAAGCTGAAGTCTTGAAAAACCCTGAAAATGCTGAAGGATGGAGATTACTTGGAATAGCCCACGCAGAAAACGATGATGATCAACAGGCCATTGCAGCAATGATGCGGGCACAGGAGGCTGATCCAACAAACTTGGAGGTGCTTCTTTCTCTTGGTGTCAGTCATACAAACGAACTGGAGCAAGCAGCTGCTTTGAAGTATCTATTTGGCTGGCTACGTCATCACCCAAAATATGGAACACTTGCACCGCCTGAGATGTCTGATTCTTTGTACTATGCTGATGTTAGTAGATTATTTAACAAAGCGGCTGAAGTATCGCCTGATGACTCAGATGTCCATATAGTTCTTGGAGTTTTGTATAACTTATCCAGAGAATATGACAAAGCCATTACCTCTTTTGAACGAGCATTGAAACTTAAGCCAAATGATTACTCTCTCTGGAACAAGCTTGGTGCAACACAAGCAAACAGTGTTCAAAGTGCCGATGCAATAATGGCTTATCAACAGGCACTAGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGTTATGCAAACCAGGGCATGTACGACGAGTCTATTCGTTATTATGTTCGAGCACTTGCAATGAATCCAAAAGCAGAGAATGCATGGCAATATTTAAGAATTTCATTGAGCTGTGCTTCCAGGAATGACATGTTGGAAGCTTGTGACAACCGTAATTTGGACCTTCTCCAGAAGGAGTTTCCACTGCAATGA

Protein:

Promoter(3k):

>AM03G037350.1
AAAATTCCCAAGTCAACAAAACTACCTGTTATCCTTGAAGAAGTTGGCATCAAGTAAACTTAAGGAGCATCTCAGACAGGGAACATTATCATTAACATGTATGCACATACCTCTTTTCCAAACTGTACCATATTATCAGCAAGTCTTCTGATCTCCTTAGCCTATATCCAAAGTACACAACTACACATATTATAAATTAGATGGTATAAAAATCAAAAATATGAAATTCATAAATGACATGTTCTTAAAACAAAACAAAAACGCATAAAAAGAATGTTGACAATCAATGATAACAAAAAATGATGCAACCACAGTATCTCATTACACAGAGGAAGACCATAAAAAGAAAAATTGAGAATTTACAAGTATCAAATCTAGGAACGACAATGCAACTATCCATGCTTAAGAGAGACATTCAATTCAAAAGCCAATCATATGCTTTGCTGAATAATTCAGTCATCACAGAATTTATACATTGGCCCCAACTTTCTCATGATAGATCAAATAGAAATACCACAACTAAATCAGAGCAACATTATCATAACATTGTATATGATAAACTGAAAAAAGAACATAAATTATGATAATCCAATTAAAATGCCACAACTAAATCAGAGCAAGATTATCATAACAACATTGCATATGACACACTGATAAAGCAAACATAAAACATGATACTTGCAGAAATGTCACTTCACCTTATACTTAGCAACCTCTTCGCTAACTTCCTTCAAGTCACCTTTGGTAAAAATCAGCCCCACATTTCCCTGGTTCAATGAACAAACATTATTCAAATCCCCAAAAAAAGAATCAACAACAATAACAACTCTGAATCTAGTTTAGTAATTAAAACATCAAAATTCCATTGTAATACATAACCAAAGTTTGGAGTGGAAGAGATTAGGGATTAGGGCTCGCGATTGCAGATTTACAGATTGGGGATTAGGGTTTTTGGTTTGGAGAGGAAGGGAGGCGATGGAGGGTGGACGGCGATGGAGGGCGATGGTGGGCGATGGAGGACGATGATTGAGAGCAGTGAAGGAGCAGAGAACAAGAGTGAGCTGAATAACGCGACTGAGAGAGCCAGAGAGGGAAGCTGAAGCTTGCGACTGAGAGAGGGAAGCTCGCGACTGAGAGGGAAGCTCGCGAGAGAGAGAGAGAGAGCGCCAGAGAGAGAGAGCACCTGGAGAGAGAGCACCTGGGGAGAGCGCAAGAGAGAGAGAGAGAGCCTGAGGGAAGCAGGAGAGAACGAGAGTGACAATAGAAAGGGAGAGAACGAGAGTGCCTAGGTTAATGAATTGGGATTCTGAATTTGCGACGGGCTTGCGACAAAGACTTCGTCGCAAACTAGCGACCAACATCCTCTTCCGTCGCAAAGTAGTGACGAACATGTCTTCCCGTCGCAAATTATGAGCGGGATTGTTACCGCCAATGCACAATTTCACTTGCCGTCGCAAATCCGTCGCAAATTAGCGACGGGTAGTTGTCCGTGGGAAACTTTCGTAGCAATATAGGCTTATTCTTGTAGTGGCTGAAGCTATTCTAGAGAGGAAAATGGTCAAGAGGGGTCGAATTGCTGCTACTAAGGTTACGGTGAAATGGAAGAACCTCCCTATTAAGCAAGCCACTTGGGAGTTTTACCATGACTTGCTTTAACAGTTTCTTGAAGGTCACCCTCGCGAAGAGTGTTCTTCAAGGCGAGGGTATTGTAATAGGGTCACAAGTAGCTAGTAAATTCTAGATTTTTTTTACTGTTTGTTACGTAGTTTTAAAAACTAGCTGGGACTGTCCCTTTTTTAACTGTTATCTTGTCCTTAGTGGATGTTTCTAGAAGGCCATAGTTGGCCATTAGCCGATGTGATCTTCTGTACTATATATGCGACTACTTTAATGAAAATTACACAATCATTGAATCATGATTATTATTACCTTTCTATATTTTCGTGCCCTAATATTTCGAGTAGTCCTCCATCGAATAACATTCTTCCCATTGCGGTTCCTGGTAACTGGTGCGCTACTATCGAATTCCTTAATAGCCGTGCTTCTTATGTGATAGTGTTTTTTAAGCAAATCTTCGAGGAGGTGGGTGAAATTTTCTCAAGAAATAAGAGAAATGAGTGTTATATTCAAAATAGATGGGGTGTTTGTGCCATTTAATTATAACTTAGTGCAAGCAGATGTAATTTCCCCCCTTTTTATAATTATTTTTACATGTATGTTTATACATAAAAATAAAAATAAATGGTCATATCACAAATAGAATCCAAAAATATTTAAAACGTATTCAAAATTATGAGATAATATAAACATCTAAATAAACTTTAAATTAGAAAACAATTTATAGAAGCCAAATTTAAGTACTTTTCCATATCTTACAAAAAATCATTTTCTATTTCTCATCATACAAATTTAAAAATACCTCTGAAATAATGGCTAGAGTCATTGTTTTATTTATTTTTTAACTAGAGTAGTTGTTTTAACTAATAAAAAAATTTAGTGTTAGGTGTGAGATCAACCAAGCTACCAATTGTCTCTTACTGTTTGTTCATTTGAAAGACGCCGACTCCCGAATTCGAATTCGGGTGTCAACAGTGATAATATGTATGCGTTTTTATTTTTTTTATCATTTCATCTAGGATAAAAAAAATAAAAACCAAACTATCAATTATTTAGTCAAATATGTTCATTATAATCCAGATTATAGGTCGATTGAAGAGCTTCACTTTCGACTTTTGATTTATTGTAAGACATTCATTTATGAAATTATCTTTTAAATAAAAAAACATAGTAATAAATAAAAAATTAAAAGGCGTGTATAAGAAAATCAAAAAAATAAAATAAAAGGAGAAAAAAAAGAAGAAAAATGATGATACAGCCTAGAAAATGACAATAGCATGGAGATAACAAAAGAGAGAGAAACATCACGGAACGGTGAGGAAGGGGAGGAAAGGCAGCAGCAGGCAAAAGCACTCATTTCATTATCATCCTTCAAATTCAATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00515.31	TPR_1	605	637	1.30E-25
PF00515.31	TPR_1	673	704	1.30E-25
PF13414.9	TPR_11	619	649	1.20E-21
PF13414.9	TPR_11	656	686	1.20E-21
PF07719.20	TPR_2	673	704	1.20E-21

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0016740	transferase activity	Molecular Function
GO:0008180	COP9 signalosome	Cellular Component
GO:0006625	protein targeting to peroxisome	Biological Process
GO:0009733	response to auxin	Biological Process
GO:0000338	protein deneddylation	Biological Process

InterPro

InterPro term	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR001440	Tetratricopeptide repeat 1
IPR019734	Tetratricopeptide repeat
IPR024111	PEX5/PEX5L

trEMBL

trEMBL term	Description
A0A1S2Y6P7	_

SwissProt

SwissProt term	Description
PEX5_ARATH	Peroxisome biogenesis protein 5

KEGG

KO	Description	Enzyme
K13342	peroxin-5

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G56290	peroxin 5
Medicago sativa L.	MsG0380011706.01.T01	_
Oryza sativa L.	LOC_Os08g39080.1	tetratricopeptide repeat domain containing protein, expressed
Cucumis sativus L.	Csa018049	_
Glycyrrhiza uralensis Fisch.	Glyur000207s00015915.1	_
Codonopsis lanceolata	Cl_chr04_51880T	_
Arachis hypogaea L.	AH05G37400.1	Peroxisome biogenesis protein 5 like

Expression pattern