Gene detail

Detail information of Am03G036790.1 Annotation

Gene ID	Annotation
Am03G036790.1	cellulose synthase 6

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G036790.1	mRNA	Chr03	183971278	183981820	-

Sequences

CDS:

>Am03G036790.1
ATGGAAACCAATTTGGGGTTAGTTGCAGGCTCTCGAAATAGCAATGAATTCATTATCATACGTCAAGATGGTGATTTTTCTAGGAGAGAGTTGGAAGAGTTGGATGGACAAACATGCAAACTATGTGGAGAAGAGATAGGGGAAAATGGAGAGGGTGAGCCCTTTGTGGCATGCAATGAGTGTGCCTTTCCTGTTTGTAGAAATTGTTATGAATATGAAAGGAGGGAGGGAAACCAAGCATGTCCTCAATGCAAAACCAGATTTAAGCGTCTCAAGGGATGTGCTAGAGTTGAGGGGGATGAAGAGGAGGATGGTACTGATGACTTGGAGGATGAATTTGATTTTGATAAACATGATATCCAAACACCCATGTCTCCTGAGAGTGAAGAAATACCTCAAGAACATTATGCAATAGTTCCTTCAAGTTCAGCCATGATTAGTAAAGAAATAAAAACACTACAAGCAAGAGCAAGACCCTTGGATCCTTACAAGGACATGGCTGCTTATGGCTATGGAAGTGTTGCTTGGAAGAATAGGATGGAGACATGGAAGCAAAGACAAAGTGAACTTGGTATTATGAGAAAAGAAAATAATGATAATGAAGACATAGACAAGGTTGTGAATGATGATGACCCTGAATTTCCTTTAATGGATGAAGGAAGACAACCATTATCAAGGAAGTTGCCAATTCCATCAAGTCAAATAAACCCTTACCGTATGATCATAATCATAAGACTAGTTGTTCTTGGTTTCTTCTTTCACTATAGAGTTATGCATCCAGTGGAAAATGCCTATGCTTTATGGCTTGTATCAATAATATGTGAGATTTGGTTCACTCTTTCATGGATTCTAGGCCAACTCCCAAAATGGCTTCCTGTTTCAAGAGAAACTTATCTAGACAGACTTTCCTTGAGGTATGAGCAAGAAGGCCAACCTTCACAACTTTGTCCAATTGACATATTTGTGACAACAAATGATCCACTAAAAGAGCCTCCTCTAGTGACAGCAAACACAGTTCTTTCCATTCTAGCTATAGATTACCCTGCTGAAAAGGTTTCATGTTATGTATCTGATGATGGAGCAGCAATGTTGACATTTGAGACTTTATCAGAAACTTCTGAATTTGCAAGAAAATGGATTCCTTTTTGTAAGAAATTCAATATTGAGCCTAGAACTCCAGAGTGGTATTTTTATGAGAAAATAAACTATCTCAAAGATAAAGTGCACACATCATTTGTGAAAGAGAGGAGAGCAATGAAGAGAGAATATGAGGAGTTTAGAGTTCGAATAAATTCTTTGGTTGCAAAGGCTAGGAAGGTACCAGAAGAAGGGTGGACAATGCAAGATGGAACACCATGGCCTGGAAATAGTGTTTGTGATCATTCAGGAATGATACAGGTTTTTCTAGGAGAAAATGGTGGATATGACATGGATGGAAATGAATTACCGCGTCTGGTATATGTTTCTAGAGAAAAGAGGCATAACTTCAACCATCAAAGAAAAGCAGGAGCACTAAATGCATTGGTCAGAGTGTCTGCAGTGCTTTCCAATGCCCCTTTTCTATTAAACTTGAACTACAATCATTACATCAACAATAGCAAGGCTACAAGAGAAGCAATGTGTTTCATGATGGATCCACTATTAGGAAAAAGGGTTTGCTATGTTCAGTTCTCTCAGAGATTTCATGGTATTGACAACAATGACCAATATGTCAATCAAACAAATACATTTCTTGATATAAACATGAAAGGTTTGGATGGTATACAAGGACCTATATATGTTGGGACAGGATGTGTATTTAGAAGACAAGCACTTTATGGTTTTGATGCTCCTAGGAAAAATAAGTCTCCAACCAACACATGCAATTGTTGGTTGAAGTGTTGTGGATGGTGTTGCATGGGAAAAAGGAAGAAGAGGAAGTTGAAGAAAGCCAAGTTTGAGAAAATGGAGAGTAGTCACAAAAAAGTACATTCTGAAAGATCTATTGCTGAGAATGCTTTGAAGTGTATTGAACTTGGCACTAAAGGAGTTGAAGATGAAATTTTGGCTCCAATCTCAAATCAGAAGTTGATCAAGAAATTTGGACAATCTCCTATTTTCATTGCATCCACTCAATTAGAAGATGGTGAGTCATTAAAACAGGGTACACTAGCTTCCCAACTTACAGAAGCTATACATGTAATGAGTTCTAGCTACGAAGAAAAAACAGAATGGGGAAAAGAGGTTGGATGGATATATGGTTCAATTACAGAAAATATATTAACAGGTTTCAAAATCCATTGCCATGGATGGAGATCTATATATTGTATTCCTGAAAGAGCTGCATTTATAATATCTTCCCCAAATAACCTTTCTAATGGTCTTCAACAAGTTTTTCAATGTGCCCTTGGATCCATTGACATATTCATGAGTAAACACTGTCCTCTTTGGTATGGATATAAAGGAGGACTAAAGTGGTTAGAGAGGATTTCTTACGTAAATGCTACAATATATCCATGGACATCAATACCTTTGGTTGCATATTGTACCCTACCTGCTGTTTGCTTGCTTACTGGGAAATTTATCATTCCTGAGCTAAGTAATACAGCAGGAATGTGGTTTATATCTCTTTTCATTTCCATTTTCGCGACGAGTATGTTCGAGATGAAATGGAGTGGAGTTACATTTAAAGAATGGTGGCGAAATGAGCAATTTTGGGTGATAGGAGGAGTGTCAGCACATTTATTTGCTGTATTTGTAGGGTTATTCAAGCTCTTAACAGGTATAAATACAAGTTTCATAGTGACAACAAAAGCAAGAGATGAAGACAAGGAGAAATTTGAGACATTTTCTTTGAAGTGGACAACTTTACTTATCATACCAACAACATTGCTAATATTAAACATAATTGCTATGGTTGCTGGAGTGTCACATGCAATAAATAATGGTTTTGAATCTTGGGGTCCTCTAATTGGAAAGCTCTTGTTTTCTTTGTGGGTGATTCTTCATTTGCATCCATTCCTTAAAGGTATGACAGGTAGACATAATAGGACTCCTACCATTGTTCTTGTTTGGTCAATCTTGCTTGCTTCTTTCTTCTCTGTCTTGTGGGTGAAAATTGATCCTTTTTTACCTAAGACAAATGGTCCAATACTAGAAGAATGTGGATTGGATTGCAATTAG

Protein:

>Am03G036790.1
METNLGLVAGSRNSNEFIIIRQDGDFSRRELEELDGQTCKLCGEEIGENGEGEPFVACNECAFPVCRNCYEYERREGNQACPQCKTRFKRLKGCARVEGDEEEDGTDDLEDEFDFDKHDIQTPMSPESEEIPQEHYAIVPSSSAMISKEIKTLQARARPLDPYKDMAAYGYGSVAWKNRMETWKQRQSELGIMRKENNDNEDIDKVVNDDDPEFPLMDEGRQPLSRKLPIPSSQINPYRMIIIIRLVVLGFFFHYRVMHPVENAYALWLVSIICEIWFTLSWILGQLPKWLPVSRETYLDRLSLRYEQEGQPSQLCPIDIFVTTNDPLKEPPLVTANTVLSILAIDYPAEKVSCYVSDDGAAMLTFETLSETSEFARKWIPFCKKFNIEPRTPEWYFYEKINYLKDKVHTSFVKERRAMKREYEEFRVRINSLVAKARKVPEEGWTMQDGTPWPGNSVCDHSGMIQVFLGENGGYDMDGNELPRLVYVSREKRHNFNHQRKAGALNALVRVSAVLSNAPFLLNLNYNHYINNSKATREAMCFMMDPLLGKRVCYVQFSQRFHGIDNNDQYVNQTNTFLDINMKGLDGIQGPIYVGTGCVFRRQALYGFDAPRKNKSPTNTCNCWLKCCGWCCMGKRKKRKLKKAKFEKMESSHKKVHSERSIAENALKCIELGTKGVEDEILAPISNQKLIKKFGQSPIFIASTQLEDGESLKQGTLASQLTEAIHVMSSSYEEKTEWGKEVGWIYGSITENILTGFKIHCHGWRSIYCIPERAAFIISSPNNLSNGLQQVFQCALGSIDIFMSKHCPLWYGYKGGLKWLERISYVNATIYPWTSIPLVAYCTLPAVCLLTGKFIIPELSNTAGMWFISLFISIFATSMFEMKWSGVTFKEWWRNEQFWVIGGVSAHLFAVFVGLFKLLTGINTSFIVTTKARDEDKEKFETFSLKWTTLLIIPTTLLILNIIAMVAGVSHAINNGFESWGPLIGKLLFSLWVILHLHPFLKGMTGRHNRTPTIVLVWSILLASFFSVLWVKIDPFLPKTNGPILEECGLDCN*

Promoter(3k):

>AM03G036790.1
ATATCGTATATTATTCTACAAAGATGTACATCAAGAGATGGAGGAGAGAATTGGATATGAGACGGACCACGTGTCCCATATGGATATTGAAAACCTAGTTAAAAATTTGGGGTATAGAGGCTTCAAATCTTTGTTACCAACACCCAAAGTTCTATAAATACTTCGTTATTCATGTTTTTCAATCCATCATAGTTTTTCTTTCAAGTCATAGGTGAAGAGTAGCCTTCATCAGTGCAACCAGTAGCACAAACAATACCACTGTTCGTGATTATCGCTGACAAGCTCATCAGATTTCAATGGTAGACCGTTCTCTTTTTCGAATAGTATAATTTTCCCAACCACGTTCTATAAGATCCATTTGCACATCAAGATCTTTTGAGGTCAATACTCTACATTATATTCAAGATAGTTCTTTGAAGATCTTGCTTAGGAGCCATTTCATAAAGAGGTAGATTGAGTGAAGCTTGTAGAGATCTCTTTCGCAAATAGATGAATTGAATTCATTGTTCACATGTAGCCATTTTCTTGAAATACGCGTAGTTTTCACTCAGCCATAAATGCACACAATTTTAGTAGTCTCCTTTTTCTTCTAGTGGATGGGCATGTCTCCAAAGCTTTGACAGGAGGATCTGCAATGTTGGATCAAGCGCTTACCACTAGGCCAAAAGCATAGTTGTTAGCAATGACACAACTTTATTTCCTTAAGGATTCTCAGAGTCGCATTTGGCCTAAGGATTGCGCCCATCATGGGCTCCATGGGTTGGGATGTTAAGCCCGTCGAATTCTAAGGGTGAAGCTGACTAATAAAGTTGAAAATCTCCCCTAGTATCACATAGGGGATTCAAACTCATGACCTCACTCTCATACAACTTGTTGGATCAAACGCTTACCACTAGGCCAAAAGCTATAGTTGTTAACAAGGGCGCAACTTTGATTCCTTAAGGATTCTTAGAGCCACATTTGGCTTGAGGAGCTACACCCAATATAGGCGCCACGGGTTGGGACATTAAGCCCGCTGAGTCTTAAGGGTGGCGTTGACCAATAAAGCCAACATACAAAAGGCACTCTAATGTCGAAGTTAGATTGGGTTTTAGAGTGAAGCATAGTCAAAGGAGTGGGGTAAATTGAGTGTGTCAAACCTAGGCATTAGAGTCGCTTGGAATTCCCTCTAGATATTATTATTTTTGTTATGGAGGAACTCCTGTTCGAGATAAGAAAGGTTGGCTCTAAATTCGGCATGCATGCGGTCCTTTGGTAGTTTGGGAGACAAGAAATAGTGAATTTACTTGGATAGGGTGCAAGATTCCTGAGACCCAAGAACATTTATAACACAATTTTATGGAAGATGGTATCTGGCTAGAGCAAAAAAAAGGTCATTGCCTCTTTTACAAGGAGTGTGAATCTCTTAGAGTGTACCTCTAGGTGCTAGCTAGGAACGTACTTATTTTTTTGGGGGCGGGGGGCTTGTGGGCGCTTCAGGTTTTTTGACTAAAAAACATATTCATTTATTCAAATTGATAAAATACATCAATAACAACACAAATTCAAAATTGCTAACACTGTAAAGGATGAATCTAATAAACTCAGCACTCAGGTTAATAGCATAAAATGGCAAAATGTCTACAAATGTGATAAAATCAAAGTCATCGGAATACTCATGCCTCAGGGTCTATAACGTTGATGCCCAAGTCATTGATTAAATTGTAATGAGTCGAAGTCGATATGTCAATCGAAATCAAATGAATTACACCGCAATGAGAGGGGAAACCAAACAACGACGCACCTAAGACGACGAACAAAACAATGCCGCATTCAAACGACGAAATCAAGAAAAAACACAACAAAAAATAGATCTATGTAGAAGCCACTCATTTAGATAATATATAAGAGAGGAAAAACAATGAAGAAGGGTGATTCTAGGTCACAAAATATGACCAAAAATCACCCTTCTCTAGTATATGAACAAGAAGAAAAAGAAGAGTAAAGAGAAAAGTGAGAGCATTGGCTAGCATTTTTGAGAGCCCTCCCCTTTGTGGGTGCTTTATTATAGTGTCTAGTTTGGTTTGAATTGGATATTAACTCTATTCTCGAATGGTGATACGGTTGATGCCTTGTTGTAATGAGTTAAAGTACCCTTATATACTCTTTTAGTCTTTTAATAATATGGTGCTCTTTGATATTTCAAAGAAAAAAAAACACTTTCGCCATCTTCATGAACATAAACATAAATTTACCCTAAAAGAATTTATTATTGGCTTTCAGCATATATAGCTTATAGTAATATGTATATGAATATATTTCTTCAAGCAAACGCAGTAGACTCATAATGTCGCTAATGCTGTTTTTTTCTCTATGGATTTCAAGTAATGAACATCATGGAAAATGACACATAGAGAGAGGTAAATAGTTATAGCCTCAAGGGCACGTGGAAAGATATCTTCTCTTTTTTTTTTCACTTTTTGTTTGTTTTATAATGAAGCAAATTAATTAATAAAGCTTTGTTAATTAGCGGAGTTACAAATGAACACAAAAAAGTTTAATAAGCATATGTGTCAAACTCAAATGCAACCAAAAAGGGAAGGCACTTGGACGGAGAAAGAGAAGAAGATAGTAACGTGTCATATAAAAGAAAAGAAAAGAATATTAATATTATCGATTGTAATCATATATAATAATAATAATTGTGTAACTTTTGTTTGTTTTTATTGTTTAATTAAAAGGAATTTTTTTTGAAGAGGTGTTCATATAAAAGAAGAATATGCAATTCTCTTGCTCAAGTAAAGTACATCTATATCTTCCTTAAGTTTAAAGGCAAAGGTTCTCTATAGACTATATTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGGTAAAGACAGTGCATATATGATCTATAGCACCAAAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03552.17	Cellulose_synt	318	1044	0
PF14569.9	zf-UDP	30	105	9.40E-36
PF14570.9	zf-RING_4	39	89	7.60E-06

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT2

Gene Ontology

GO term	Description	Category
GO:0005886	plasma membrane	Cellular Component
GO:0046872	metal ion binding	Molecular Function
GO:0000281	mitotic cytokinesis	Biological Process
GO:0071555	cell wall organization	Biological Process
GO:0042546	cell wall biogenesis	Biological Process

InterPro

InterPro term	Description
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR029044	Nucleotide-diphospho-sugar transferases
IPR027934	Cellulose synthase, RING-type zinc finger
IPR005150	Cellulose synthase

trEMBL

trEMBL term	Description
G7IVC3	_

SwissProt

SwissProt term	Description
CESA3_ORYSJ	Probable cellulose synthase A catalytic subunit 3 [UDP-forming]

KEGG

KO	Description	Enzyme
K10999	cellulose synthase A	[EC: 2.4.1.12]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G64740	cellulose synthase 6
Medicago sativa L.	MsG0480023279.01.T01	_
Oryza sativa L.	LOC_Os07g24190.1	CESA3 - cellulose synthase, expressed
Cucumis sativus L.	Csa010072	_
Glycyrrhiza uralensis Fisch.	Glyur000048s00002278.1	_
Codonopsis lanceolata	Cl_chr01_30660T	_
Arachis hypogaea L.	AH03G33450.1	Cellulose synthase A catalytic subunit 6 [UDP-forming] like

Expression pattern