Detail information of Am03G036780.1 Annotation
Gene IDAnnotation
Am03G036780.1 RPM1 interacting protein 2
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am03G036780.1mRNAChr03183951815183957991+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13639.9zf-RING_23363804.50E-09
PF00097.28zf-C3HC43383791.20E-07
PF12678.10zf-rbx13343805.20E-07
PF13445.9zf-RING_UBOX3383771.40E-06
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
GO:0005886plasma membraneCellular Component
GO:0046872metal ion bindingMolecular Function
GO:0008233peptidase activityMolecular Function
GO:0006511ubiquitin-dependent protein catabolic processBiological Process
GO:0016567protein ubiquitinationBiological Process

InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR003892Ubiquitin system component CUE
IPR035667Plant RIN2/3, CUE domain

trEMBL
trEMBL termDescription
A0A2K3P3E2 _

SwissProt
SwissProt termDescription
RIN2_ARATHE3 ubiquitin protein ligase RIN2

KEGG
KODescriptionEnzyme
K10636E3 ubiquitin-protein ligase AMFR[EC: 2.3.2.36]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G25230 RPM1 interacting protein 2
Medicago sativa L.MsG0380011647.01.T01 _
Oryza sativa L.LOC_Os07g30100.1RIN3, putative, expressed
Cucumis sativus L.Csa007930 _
Glycyrrhiza uralensis Fisch.Glyur001837s00030387.2 _
Codonopsis lanceolataCl_chr03_43930T _
Arachis hypogaea L.AH10G29630.2E3 ubiquitin protein ligase RIN2 like

Expression pattern