Gene detail

Detail information of Am03G034260.1 Annotation

Gene ID	Annotation
Am03G034260.1	myb domain protein 83

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G034260.1	mRNA	Chr03	171535891	171539347	+

Sequences

CDS:

>Am03G034260.1
ATGCAAATGAGGAAACCTGAAATGATAATGTCAAAAAACAACAACAAGAGTAGTAATCCTAGTACCACAAAGTTAAGAAAAGGTTTATGGTCACCTGAAGAAGATGAGAAATTGATAAGGTATATGATAAGTAAAGGACAAGGTTGTTGGAGTGATATTGCTAGGAATGCTGGTCTTCAAAGATGTGGTAAAAGTTGTCGTCTTCGTTGGATTAATTACTTAAGACCTGATCTTAAACGTGGTGCTTTTTCACCTCAAGAAGAAGAACTCATTGTTCATTTCCACTCCATTCTTGGCAATAGATGGTCTCAGATTGCAGCACGTCTACCAGGTCGCACAGACAATGAAATCAAAAATTTCTGGAACTCCACATTGAAAAAGAGATTGAAAACCAACAACTCCACTTCATCACCAAACAACAGCAATGATTCATCGGATCAACCTAGAGATCATATTTTGGGTGGGAATATGAATATCAATATGCCAAATATTAATGAACATGATGAACTCATGACATTGTGCATGGATTCCTCATCATCAACATCATCATCATCCATGCAATCCATGCACATGCATGCAATGGTTCTAGCTGACCAATATGATCCCTTCTCCATATTATCAACCAATCGTTATGACATGTCTAGTTTCCTTGACATGCCTTCATGCTTAACCCAAGTTGGCAATAATAATATGGTAGATGATGTTGTTGGGCTTCATAGTGATTATGGGGTTTTGGAGAATAATAAAATGGGGTTAGAAAATGACGTTTCCCTTCCTCCACTACAAAGTAGATCAAGTATTGAAGAAAATGGTGCTATCCCAATTGATCATAATTTGAAAAGCCATAACAACAACCACTTCAATAATAGTTGCTTCAATAATACTAATCAAATTCCAAACTCCAATGTAGAGGATTTGTTTGGGTTTGAAAATCATGGTCATGGGGAAAACTTAAGATTGGGAGAATGGGACTTAGAGGGCTTCATGCAAGACATATCCTATTTCCCTTCCCTTGATTTCCAAGTTTAA

Protein:

Promoter(3k):

>AM03G034260.1
TCTTGATCCAAATTAGGATCCACTATCCGCTCCCCCACTAACCCAAACCATGTCGCTCGCTAACCTGAGCCATGTCGCTGATGCCACTTGTTGGGGAGTTCGGGGGAGCAACACCGAACTAGCCAATAAACCAGACCACCAAGAGACTTGGACGTCTCATCTCCACCCAAAGCCTTAAGTCAATGGGTATATGAGTCCCCTCTCTTATATATCCTTCATTTGACTCATTCTTAACAGATGTGAGACTAACCATTCACACTTGAAATCCCAACAATACCATCGGTGATGATTTAGTCTATAAATCCAAAGATAAAAATCTAGGACACAATCAGCTTGGTGAACCTCAACCTTGTACTTCCATGTTTCTTCTTTCTGAGTACTCTTACTTTTTAGCTCTTGATTTTGTTTTCCAAAGTACAACTACTTTTTAGCCTACTAGGCATTCTAGTAATAGAATCTTACTATAAAGAGTACAAGGTGTAACACATAATCCCCAGATCCAGATGAGTTGTTTTTTCTTGTCTTTGTAACAAAGTAGAATGTTGCTTGTGATACTACTTTTCTTGTATTTCTTGCTATTTTTATATACCCCTTTTCCCACTTGTTTTTAGACAGCTGTAGATGGGAAATTGAATGCTTTAGAAACATTTGAGTATTTTGAGAGATTTCTTATTCACTTTTTCATACAAGATTGTGGAAGTATCTGTCAGAATAGAGATAGATAGGGAGAGGGGGAATGAATAATAAATAACTATATTGCCCTTGTAATTTTTATGAATTGACAAAGACTCCCTCATGTATATCTGATTCTGAATTTTTGGACAATGACTATATTATTTTAAGTTCATGATTTTTATTTTTATTTTTTTTGTGTTGAACAATTGACATGTCTGAAGAAGATTAATTAGGTAATGGAAAGGGAATCACTCATGGAGAGATATATTTTGACAGCTAGTAGGAAAATGATGGATCAAAGATTGTGTCTGTCTACATTTTATCTGCACAGTTGAATAATCTTAAGAAATTGTTCTCCTAATTATATAACATGGATTTTAAAACAAGGTCAATTTATTTATTTATTTATATGAAAGCTGTAATGTTGTTCCAATTTATAATCCACATCCAATATTTTAAATCACGGTCGCATCAAGATCTATATTGCAGAGAATTGCGAACAAATATAGATATGGCTTCAATCACAATAGTCGCATCAAGATCTATATTGCAGAGAATTGCGAACAAATATAGATATGGCTTCCATCACAATAGTGTATATGACGACAACTTAAAAAATCATAATATTGCGACCTAGATCACGCTAACGATCATGTCAAGCAAAGAATTGTGGTCAAATGTTGTAGGTCTGATCAAGAAAATTGGACCTGCCTAGACTCGCCCGGCCGGATTCACTATTTCGTGTGGCGGTCGGGTTCACTAAGTTGGCCGATTTCATGGAGTGGCCGACGCTGTCAGGCTCGGTGGAGTGCAAAACCGACCTGTGGCATCCGAACCCGCCCGATTCCCCTTGTTTAACCCTAGGTATATATATTCTACAGTTGCTGAGAGAGTTGTACGTATGTTGATTGGCCTCAATATTTTTCTAAAAACTTTGTGTATATCAAGAACTAATATACAAACACATAAAAATAATTATAATTTAAAATAAATTAAGGGGTAGGAAATAAGATACGTAGTAGAGTAGTTACTATGGATAAAGAATACACGTGTACTAGTCCTTGAATGGCAAGTAGAAGTTCTTATCAATCATATATAGAACTTCAAGCAAAACACCCAATATTGAACTATACAATTAATTTTTATTTTATCTTAGTAAATTTCAAAGGACTATACAATTAAACCTCATTCATGCTAACTTTCTATATTGTTAAACTTTTAACAAGTACAAATTAAAAGTCTTCAAAGTACTTCAACTTAATTACAATTGTCCACATTAAGAAGTAAATTATGCAGATTACTATAGTAAATTTTACAAGATTAAAAGGTAATTTTTTTTGTGAGTCCTTAATTAGTAAAAAAATCTTGTATATATGGTCCTTTTCATCTTTACAGAATGAGAGCCTTAATCTCCAATATATGACAAAATTATGCCATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCATTGCTTTGTAATGGGGAGTGTTACATTGTTTGTTTTTGAAGTATGCTAATAAGTGGTTACAGCCTCCCTAATGAAACTCATGCAAAAAATGCAATCTACACACAACAAACAAACAATAATATATAATTAATTTTCACATTAACAAACACTTGTCATCAAGCATGCTTCACACTTTTTTTACATTAAATTAAAATCATAGTCTTTCTTCTCTCTCTAGCCACAGTACACTTGAATTTGAAGTTTAAAGCCTAGTAAGAAAAAGAGAGAGAGAGTATTATGTGAAGTGGAAGCAAAATAGTTTCTGTTCCATATAGAAAGAAAAAAAAAAGATGACGATTACCTTGTGAGTGAAGTAAAATGTAATGAAAAAGACAAGAATTGAGTCAAAGACAAGAAGACCAACCATCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCTCTCTCCCTATGTGTTAAGGAGGTCCCCCTCCAATCCGTTTTCCACTCTACCTATCAACCAACAAACACAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATAACATACATTCATATTTTAAGCAAACTCCACAAGACAACAATCAATATCATCATTACAATTTTTTTTTCCCACCTCAAGAAGCTTTCTATTTATCTCTCTTTCTTAAAAAACATCATTCACCTATATATCTACACACACAAATCTCTTTCACAAACAAAAGCCTCTCACAAAGGAAACAAAAGACTTCAATATATATTTCATCAGAAGTAGTAGAGTC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	27	74	1.90E-29
PF00249.34	Myb_DNA-binding	80	124	1.90E-29
PF13921.9	Myb_DNA-bind_6	30	89	2.20E-18

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:2000652	regulation of secondary cell wall biogenesis	Biological Process
GO:0016020	membrane	Cellular Component
GO:1902680	positive regulation of RNA biosynthetic process	Biological Process
GO:0010597	green leaf volatile biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A9D4WYR8	_

SwissProt

SwissProt term	Description
MYB83_ARATH	Transcription factor MYB83

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G08500	myb domain protein 83
Medicago sativa L.	MsG0380012657.01.T01	_
Oryza sativa L.	LOC_Os12g33070.1	myb-like DNA-binding domain containing protein, putative, expressed
Cucumis sativus L.	Csa001544	_
Glycyrrhiza uralensis Fisch.	Glyur002136s00034528.1	_
Codonopsis lanceolata	Cl_chr06_03750T	_
Arachis hypogaea L.	AH08G22490.1	Transcription factor MYB46 like

Expression pattern