| Gene ID | Annotation |
|---|---|
| Am03G034200.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G034200.1 | mRNA | Chr03 | 171159087 | 171163627 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13639.9 | zf-RING_2 | 197 | 239 | 2.20E-12 |
| PF12678.10 | zf-rbx1 | 194 | 239 | 2.00E-09 |
| PF13923.9 | zf-C3HC4_2 | 197 | 238 | 1.90E-08 |
| PF17123.8 | zf-RING_11 | 198 | 225 | 1.70E-07 |
| PF17120.8 | zf-RING_16 | 195 | 237 | 1.50E-06 |
| PF13920.9 | zf-C3HC4_3 | 196 | 241 | 2.70E-06 |
| PF14634.9 | zf-RING_5 | 197 | 239 | 3.90E-06 |
| PF00097.28 | zf-C3HC4 | 198 | 238 | 5.50E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0016874 | ligase activity | Molecular Function |
| GO:0008270 | zinc ion binding | Molecular Function |
| GO:1900057 | positive regulation of leaf senescence | Biological Process |
| GO:0048437 | floral organ development | Biological Process |
| GO:0008285 | negative regulation of cell population proliferation | Biological Process |
| InterPro term | Description |
|---|---|
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR033276 | E3 ubiquitin-protein ligase BIG BROTHER |
| trEMBL term | Description |
|---|---|
| A0AAN9XPW9 | _ |
| SwissProt term | Description |
|---|---|
| BB_ARATH | E3 ubiquitin-protein ligase BIG BROTHER |
| KO | Description | Enzyme |
|---|---|---|
| K19045 | E3 ubiquitin-protein ligase BIG BROTHER and related proteins | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G63530 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0880043499.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g07790.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa010349 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur002136s00034532.1 | _ |
| Codonopsis lanceolata | Cl_C03029_unscaffolded_00020T | _ |
| Arachis hypogaea L. | AH18G29480.1 | E3 ubiquitin ligase BIG BROTHER like |