| Gene ID | Annotation |
|---|---|
| Am03G034100.1 | zinc finger (CCCH-type/C3HC4-type RING finger) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G034100.1 | mRNA | Chr03 | 170726350 | 170734914 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF18044.4 | zf-CCCH_4 | 6 | 26 | 1.80E-16 |
| PF18044.4 | zf-CCCH_4 | 34 | 53 | 1.80E-16 |
| PF00642.27 | zf-CCCH | 34 | 54 | 1.10E-14 |
| PF00097.28 | zf-C3HC4 | 200 | 257 | 3.30E-07 |
| PF13639.9 | zf-RING_2 | 199 | 258 | 4.60E-07 |
| PF15663.8 | zf-CCCH_3 | 6 | 64 | 7.80E-07 |
| PF14634.9 | zf-RING_5 | 199 | 259 | 6.40E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0061630 | ubiquitin protein ligase activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0016874 | ligase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR036855 | Zinc finger, CCCH-type superfamily |
| IPR000571 | Zinc finger, CCCH-type |
| IPR018957 | Zinc finger, C3HC4 RING-type |
| IPR045072 | MKRN-like |
| IPR041367 | E3 ligase, CCCH-type zinc finger |
| trEMBL term | Description |
|---|---|
| A0A1S2Z1G3 | _ |
| SwissProt term | Description |
|---|---|
| C3H69_ARATH | Putative RING-type E3 ubiquitin transferase C3H69 |
| KO | Description | Enzyme |
|---|---|---|
| K15687 | E3 ubiquitin-protein ligase makorin | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G08505 | zinc finger (CCCH-type/C3HC4-type RING finger) family protein |
| Medicago sativa L. | MsG0380012627.01.T02 | _ |
| Oryza sativa L. | LOC_Os06g21390.2 | Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed |
| Cucumis sativus L. | Csa001918 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000391s00016043.3 | _ |
| Codonopsis lanceolata | Cl_chr07_03900T | _ |
| Arachis hypogaea L. | AH08G22300.1 | Zinc finger CCCH domain-containing protein 69 like |