Detail information of Am03G034020.1 Annotation
Gene IDAnnotation
Am03G034020.1 Tetratricopeptide repeat (TPR)-like superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am03G034020.1mRNAChr03170227018170229598+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF01535.23PPR2252541.10E-43
PF13041.9PPR_21191676.60E-40
PF13041.9PPR_22222676.60E-40
PF13041.9PPR_23233726.60E-40
PF14432.9DYW_deaminase5406321.10E-39
PF20431.1E_motif4425041.00E-14
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0043231intracellular membrane-bounded organelleCellular Component
GO:0003723RNA bindingMolecular Function
GO:0005737cytoplasmCellular Component
GO:0031425chloroplast RNA processingBiological Process
GO:0004519endonuclease activityMolecular Function

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR046960Pentatricopeptide repeat-containing protein At4g14850-like, plant
IPR002885Pentatricopeptide repeat
IPR046848E motif
IPR032867DYW domain

trEMBL
trEMBL termDescription
A0A9D5AIU4 _

SwissProt
SwissProt termDescription
PP411_ARATHPentatricopeptide repeat-containing protein At5g40410, mitochondrial

KEGG
KODescriptionEnzyme
K23541Ca2+/H+ antiporter, TMEM165/GDT1 family

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G40410 Tetratricopeptide repeat (TPR)-like superfamily protein
Medicago sativa L.MsG0080048365.01.T01 _
Oryza sativa L.LOC_Os03g27880.1tetratricopeptide-like helical, putative, expressed
Cucumis sativus L.Csa011375 _
Glycyrrhiza uralensis Fisch.Glyur000391s00016052.1 _
Codonopsis lanceolataCl_chr02_06250T _
Arachis hypogaea L.AH18G25590.1Pentatricopeptide repeat-containing protein At5g40410, mitochondrial like

Expression pattern