Gene detail

Detail information of Am03G033270.1 Annotation

Gene ID	Annotation
Am03G033270.1	SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G033270.1	mRNA	Chr03	163883123	163901992	+

Sequences

CDS:

>Am03G033270.1
ATGGAACTGACCGAAGAACAGATAAAACAAATCGAAGCAAATCGCGCAGCAGCCATCGCTAAACGAAAAGCTTTCTTAGAATCCACCACCCTTCAACAACAACAACAACAACAAAACCCTTGGCACCTTTTCAAGTGCCAAAAATTCTCTCATCCCCAACCCCAACCCCAACCCAAACCCCAACCCCAACCCCAAAAATTCCTCGCTAGACTTGAAATTTGCACCCCCGATTCTTTCTCAATCACACCACTCCCTCTCTCCAATTTCACCTTTCCCTCTTTCGACACTTGTTTCCACACTCTCAATTCAATTCTCTCCAATGTGGAGTTATCGCATTTCACACAAACGAGCACGGGAGGGAAGGCCAGTGTGTTTAAATTGGCGGATTACGGTTCCGTTTTGAAGCGGTTGAAGGCTGCTACGGCGGAAATTGAGGTGGAGGAGATTCCTTGGCGGACTTTCAATGTTGTTGAGAGGCTTTCGAATTCAAATGTGGATGGTCGGTGGATGCCGATGAGGCCGGAGCATTTGAGTGATGATGAGGTTGATGGTTTGATTGGGAAGTTGCCTAAGACTCTTATTGATGTGTTGTTGCCTTTTCAAATGGATGGTTTGAGATTTGCTCTTAGAAGAGGTGGACGTTGTCTCATTGCAGATGAAATGGGACTTGGGAAGACACTCCAGGCTATTGCTATTGCAGGGTGTTTCATGGATGAAGGATCTATACTTGTTGTATGCCCTGCTGTTTTGCGATTTTCCTGGGCCGAAGAATTGGAGCGGTGGCTTCCTTTCTGCTTGCCTTCTGACCTCCATCTCGTTTTTGGTCATCAAGACAATCCTGCATATCTAACAAGATGCCCTAGAGTTGTGGTTATTTCTTATACCATGCTTCATCGTCTAAAAAAGAGCATGCTTGAGCGTGAGTGGGCTCTTCTGATTGTCGATGAATCTCATCATGTACGATGTACAAAGAAAGCCTCAGAACCAGGGGAGATAATGGCTGTTCTTGATGTGGCTTCAAAAGTCAGGCGTATAATTCTGCTATCAGGGACTCCTTCGTTGTCAAGACCGTACGACATATTTCATCAGATAAATATGTTATGGCCAGGTTTGCTGGGGATGACTAAATATGAGTTTGCAAAAACTTATTGCGATCTCAAGTATTTTAAGGGTGTCCAAGGAAAATATTTTGCGGATTATTCAAAAGGCATTCGCTTGGAGGAGTTAAATGTGTTGCTAAAGCAAACTGTTATGATAAGGCGTCTCAAGGAACATGTGTTGCAACAGTTACCTCCTAAACGCCGGCAAGTTATAAGACTGTCATTGAAGAGATCAGATATAGTTGCAGCAAAGACCGCAGTTGGGGTATTAAAGATCGATGCCTCTGAGAATGCTAGTGAAGACATGCCTTTGGAAACTTTGGATGAATCTGATGGAAAGCTTTCTTATCAGGAACTAGGAGTCGCAAAGCTTTCTGGGTTTCGTGAATGGCTTTCCCTCCATCCACTCATTGCAGGAGGATCAGATAATGCTTCAAAGATGATAATTTTTGCTCATCATCACAAAGTTCTTGATGGAGTGCAGGAGTTTATATGTGAGAAAGGAATAGGTTTTGTGCGAATTGATGGACATACTCTACCCAGAGATAGACAATCGGCAGTGATCTCATTTCGATCATCAGCAGAGGTTAAAATTGCGATAATAGGTATTCTAGCAGCAGGCTTTGGACTTGATTTCTCGACAGCACAGGATGTTGTGTTTATGGAGCTACCTCAGTGCCCATCTCTGATGCTTCAGGCCGAGGACAGAGCTCATCGACGGGGGCAAACAAATGCAGTTAATGTATACATATTATGCGCAATGGATACCTTGGATGAATCACATTGGAAAAATTTGAACAAAAGTTTGCATCGTGTTTCATGTACAACAGATGGCAAATATGATGCAGTGAAAGAGATAGCGGTTGAAGATGTCTCTTGTTTAGACGGAACTATGAAAATTGACAGTGCTGAAGAACAACCTGCATGCAATTATGCATTAAGTGAAACACAAATGGACAAGCAAGTCTCTGCAGTAAATTCAAGTGAATCCGAAGCAAATCAAGATGATGAATCTGATTTTATAAATAACACAAATCAGAGTGCTGTTCTTATGGTTGATAATGTTTCCTGCCTAGATATAGGGAAGGCTTTGGTTATGGATGGAAATCACGATAAGGATGTTTCTTATGCTGAGGAGAAATGTTCTGAAAAGAGTTTTGAGGACAAAGATAAAGTAACAGAGGATAAGAAATCAACTTCGACAACAGATGTAGATGATGACCAGCCCGCTCATACTGTTGAAGCTGATGAGCATAGCACTAATCAAGTTGATTCTTTGAGATTTGAGGTGAGCCCATACACTGGAAGGATCCACTTGTATACCTGTGTTTTGGGTACAGATACAAAGCCACAACCACTTAATGAAAATTTCCGACAAGAGGAACTTGAGTTGCTGAGTTCTGCTGATGCTGATGAGAGACAGAACAAAGAGTTTGTATCTGTCAAGGATAACCCTGCTTCTAGGAATGCTCTTCTGGATTTTGCAAATGAGTGGAAGAGATTAAGGCCAATTGAACGGAAGAAGCTACTTGGAAAACCACTACAACTTCCTTTGGCTGTTGAATTGTGCTTCTTGAATGAAAGTAATAACCATAACAACAAGGGATTAATAAATGGTGGAAGTAAACGGCGCAGGACTCCTTTGATGGATATTAGCTATCCTTTACCATCAGATGCTGTTTGGAAAAAGGTTTATCTCCGAAGTGGCCTTTGTAAGAAGGAAAAAGAATACACTCAAGGCTGGACACTAAAAGATGAGCCACTCTGTAAGCTTTGCCAAAATCAATGCATGAGTAACAATGCCAAGACACCTGAATATTTTGAAGAACTTTTTTGTAACCTTGTCTGTTATCAAGAGTATCGCATTAGAACTAGCAACAGATTCCTCCGTCAGGAACTCTTCCAAATTGAGCAAGGTGTGTGCACAAATTGCCAGTTGGACTGTCATAAGCTTGTTGAGGATATAAGACCTTTGTCATTGGAAAGGCGACGGGGGTACATTGAGAAAGTAGCACCAAAAATTGCAAAGCGAAAGAACATGTTTGAGAAGCTTGTTAACGATCCAGCCGAAGGCAATGCATGGCATGCTGATCATATAGTTCCGGTATACAAAGGCGGAGGTGAATGCAAACTGGAGAATATGAGAACTCTTTGTGTGGCCTGCCATTATGAAGTTACTGCTGTACAGTGTGCTGAACGACGCAAAGTAAAAGCAAATGCCCGTAAACAACTAAAAGTATTGATGAATAGCCTGAAATATGGTAAAACGGGTGCTTCAGACACTAATATTGAGGACCATAAGCTTCTCGGGCTACAAGAAAGTAGGCTTGAGGATGAGATTTTGATCAAGGTTCCTGGAAGTGCCTATTCTCTAGCTAACAGCCAAGAAAGTGGAGAGGCAGCCTGTTAA

Protein:

>Am03G033270.1
MELTEEQIKQIEANRAAAIAKRKAFLESTTLQQQQQQQNPWHLFKCQKFSHPQPQPQPKPQPQPQKFLARLEICTPDSFSITPLPLSNFTFPSFDTCFHTLNSILSNVELSHFTQTSTGGKASVFKLADYGSVLKRLKAATAEIEVEEIPWRTFNVVERLSNSNVDGRWMPMRPEHLSDDEVDGLIGKLPKTLIDVLLPFQMDGLRFALRRGGRCLIADEMGLGKTLQAIAIAGCFMDEGSILVVCPAVLRFSWAEELERWLPFCLPSDLHLVFGHQDNPAYLTRCPRVVVISYTMLHRLKKSMLEREWALLIVDESHHVRCTKKASEPGEIMAVLDVASKVRRIILLSGTPSLSRPYDIFHQINMLWPGLLGMTKYEFAKTYCDLKYFKGVQGKYFADYSKGIRLEELNVLLKQTVMIRRLKEHVLQQLPPKRRQVIRLSLKRSDIVAAKTAVGVLKIDASENASEDMPLETLDESDGKLSYQELGVAKLSGFREWLSLHPLIAGGSDNASKMIIFAHHHKVLDGVQEFICEKGIGFVRIDGHTLPRDRQSAVISFRSSAEVKIAIIGILAAGFGLDFSTAQDVVFMELPQCPSLMLQAEDRAHRRGQTNAVNVYILCAMDTLDESHWKNLNKSLHRVSCTTDGKYDAVKEIAVEDVSCLDGTMKIDSAEEQPACNYALSETQMDKQVSAVNSSESEANQDDESDFINNTNQSAVLMVDNVSCLDIGKALVMDGNHDKDVSYAEEKCSEKSFEDKDKVTEDKKSTSTTDVDDDQPAHTVEADEHSTNQVDSLRFEVSPYTGRIHLYTCVLGTDTKPQPLNENFRQEELELLSSADADERQNKEFVSVKDNPASRNALLDFANEWKRLRPIERKKLLGKPLQLPLAVELCFLNESNNHNNKGLINGGSKRRRTPLMDISYPLPSDAVWKKVYLRSGLCKKEKEYTQGWTLKDEPLCKLCQNQCMSNNAKTPEYFEELFCNLVCYQEYRIRTSNRFLRQELFQIEQGVCTNCQLDCHKLVEDIRPLSLERRRGYIEKVAPKIAKRKNMFEKLVNDPAEGNAWHADHIVPVYKGGGECKLENMRTLCVACHYEVTAVQCAERRKVKANARKQLKVLMNSLKYGKTGASDTNIEDHKLLGLQESRLEDEILIKVPGSAYSLANSQESGEAAC*

Promoter(3k):

>AM03G033270.1
TTCGATAATCATCTTATAGATATAGTTTAGTACATTCTATTGTGTACATCACAGTAATATGCAATATGGCAAATCTAATATTACCACATCCAGATATGCTTACGGAATTTGAAACCAAAAAATAAAGACAAAAGTCTTTATTCTCCAACACATACATATGATTTCAATTAACACCTCCAATTTCTGATCAAGTTGTATCACAGTTTCCGGTATAATCATGTACTTATTTTCCAACCCAAATGTCAGTCATCAACATCAAAATCAATTTGTCAAATAAACATATGTAACGTACTTAGTGTACTGTTTCGAAAACATTTGACGTTCAACACATTTCCTTTGCGTTCCATATTGTCGTGTCTCATACATGTTTATTTGCGTCCTCTTTCAATCCAATAAAATCTGGTATTTGTTAAAACACAACCAGATTTTTATATGCTGATGATAATATGAAAATTTTTCAAATATGAGGATCAGGTCTTTAAATAATAGCGAACAAACTTACTGTGCCAATATCAAAATACTTCATTATTCTTATGTTGTAAATTGGCTTCTTATTGAGTATAACTTATATTTGATAGGAGGCTTAAAATATACCTCTGAGTCCGCCAACACCATCTCAATGGTCATAGGTGTGTTGCCGCCATGCTTAGAGAAGACATGCCATTTGTGTAGGATCTTCACCAGCACTGTTGAGGACTCGAGTTCTGGTTCAATGTTCGCTAGGGTAACAACTTTTTTTGGAGCAGCAGCACATACTTTGGATGAGGAGGCCATAGTGGGGTGAAACGTTGATTGCAGGTAGGTTTGCTTAGTTTTGTTTAACAGATGGATGCACTTTTCTGTATGATTGTTTGATAGTTATAGGGTAAGAAACTGCAGAGCTGCTGTACCTCAATAATTTTTCAGGCCCTCCATTTGCGACTAAGAATATGGCTGGTTTAAATGCCTTACCATGATTTTTGGGTGAGGTCAACAAATGGTTATAAAATTTGGTGCCTTATTAATAATAGAATCAACAAATGGTTATAGAATCAATTCGTAGTGCAATAAATTTTGTGCCTTATTAAAGGTCGGTTAAGTTGTCAGTTTTTAGTCACTAAGGATATGGGTCAATCGCTGAATTTGTAATGAATTCAGAATTCAAAGTTGATCTATTTCCATTTCAATTTCAATTTTGTCAATCTGGCTGTGTAGTAAACATTATAATGTCATTAAATTCCTGTGGTTGTATGGTGTATCATGATATGATAAATGCATTTGAGGTCAAGTTGAAATTGTGCATCTAATAATTGACTGTTGTAACATTGGTTGGCTTTTAATGTGCGTTTATCAAAGCGTGGCCGAATATTCTACAGTTGTTGGAGCATAGTAATATTAGATTCCTTTTATCAAAGCCCTCAATCTGTGGCCAAATATTATTTTGTTAGAAAACAACATAATATCAGCATTTATTACTGAACGTACCATTGCAAGCCAGATGCGTTTTTTTTTATTTTTTTCGAATGGTTTTGCTGCTGCCTACGTGGATGCATTGTGGAAACTATGCCAGCTGGCATTACGTCATCAATGACGTAATTATTTTGGTCGGGTGACGTGGACAGCTTAGGTGGATGATTCAAGGTTTATTATTATTAAGATAAGATTATTGATTAGCCATTTTCGTAAATAGAATTTATTACCAAACATTTAGTATTGTAATTTTCCTTTTACCAACAAGGGTTTGTCCAAGTGGTAACTGGACTTGGATCCCACCCCAAAGTCTCGGGTTTGAATCTTGGGTGTGACAAAAACTTTGTTGGGAGGGGAGAACCACACGGGCCGGCAAAGCCGAAAACTCGTGGCCAGCCAGGTTCCCCGGCGTAAATTAGTCACCGGCAAAGCCGGTGAAAACTACACACCAAACACCTCGTGACAAAAAAAAATTGTAGTTTTCCTTTTACATTTCACGTTGACACAATTGTTGCCACCTAGTCCGTCTCATGCCACATGTTTTTTTCCTACACAATTACATGGCAAATTTTACATTGATAACGAATAATAAATGCATTTAAATTTTTTTGATTAGAGGACCATGAATTTCGGCCTTACTTTTTCAGCTAGTAAATGCGTTTTTTGATTAATACACAATCTCCATTTATTATTTGATAACACTTGATGACATGACATGACACATATTTTTTGGTTGATTGCGTGGCTTTTAATGAATTAATACAAGACATATGATGTGGACAGGTGATGTGTACTTTTCATGATTGATTATAGTTAAGATTAAGATTAAGAATTTTAGCTTTTGATTTTTTTTAAGAATCTGTAACAAACACATAACATGTCATTATAAGTGATTATTTTTTTTTAAAAAGTGATTTTTTTTAAAAAATAAGCCGTAACAAACATGCTCATAATGTACAAGAAGCTACTCACTCCGTCTCAATTTAATTATCGTTTAAGGTTGTGCGCGGGTCTTAAGAAAATATTCGGATATGCTAACTTTTATAGTCAAAAAACGTTAACATGGTAAGACTAAATACCCCTATATTAGTATCTATACTTCACATTTCTTGTTTCTTGGGTTAAAGCAAACCTACTTTTAAAAAGTAAAAAGTAATGAGAGTATTATTGGAAAAAATCTATAAAAGTTGTATTGGTATTCTAAATTGACAAATAATTGAGACAGAGAAAAATGACAATTAAATTGAGACGTAGAGAGTATTATCTTGCCGTGAGTTTATTTGAAACTCATTTTTTATCTACTTTAAATTTGTTTTTATTTTCCCAGGGTGATATTCAAACTATTTAAATACGTTAATTCATAAAAACAACACGACAGCACCCGGTATCCTACTTGTAGTTTTACAGTTGTTCAAATCCCCTACGTGGTTTTGACACGTGCGTAGTTGTTCAAATCAAAGTTCAAATTCAAAACTGCTGCGCCTCGCATTTGAAACACCACACCAGTTTCGTTTTCATTCACTCCGTTCTCTGATCACACCAACAAATGCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00176.26	SNF2-rel_dom	215	449	1.30E-27
PF00271.34	Helicase_C	510	608	1.90E-09
PF01844.26	HNH	1058	1090	4.40E-06

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	CHR14
Transcription Factors Family	SNF2

Gene Ontology

GO term	Description	Category
GO:0005524	ATP binding	Molecular Function
GO:0009536	plastid	Cellular Component
GO:0016020	membrane	Cellular Component
GO:0003676	nucleic acid binding	Molecular Function
GO:0004536	DNA nuclease activity	Molecular Function

InterPro

InterPro term	Description
IPR038718	SNF2-like, N-terminal domain superfamily
IPR000330	SNF2, N-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR003615	HNH nuclease
IPR002711	HNH endonuclease
IPR001650	Helicase, C-terminal
IPR014001	Helicase superfamily 1/2, ATP-binding domain

trEMBL

trEMBL term	Description
A0A396ISU0	_

SwissProt

SwissProt term	Description
ZRAB3_MOUSE	DNA annealing helicase and endonuclease ZRANB3

KEGG

KO	Description	Enzyme
K25861	DNA annealing helicase and endonuclease ZRANB3	[EC: 5.6.2.- 3.1.-.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G07810	SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein
Medicago sativa L.	MsG0380012428.01.T01	_
Oryza sativa L.	ChrUn.fgenesh.mRNA.85	expressed protein
Cucumis sativus L.	Csa005409	_
Glycyrrhiza uralensis Fisch.	Glyur001630s00027437.1	_
Codonopsis lanceolata	Cl_chr05_44370T	_
Arachis hypogaea L.	AH08G30380.1	DNA annealing helicase and endonuclease ZRANB3 like

Expression pattern