Detail information of Am03G033220.1 Annotation
Gene IDAnnotation
Am03G033220.1 Pentatricopeptide repeat (PPR) superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am03G033220.1mRNAChr03163559881163561569+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13041.9PPR_2641096.80E-135
PF13041.9PPR_2971446.80E-135
PF13041.9PPR_21301796.80E-135
PF13041.9PPR_21702146.80E-135
PF13041.9PPR_22012466.80E-135
PF13041.9PPR_22352846.80E-135
PF13041.9PPR_23063546.80E-135
PF13041.9PPR_23413896.80E-135
PF13041.9PPR_23754246.80E-135
PF13041.9PPR_24555026.80E-135
PF12854.10PPR_1911231.90E-115
PF12854.10PPR_11261591.90E-115
PF12854.10PPR_11621931.90E-115
PF12854.10PPR_11972281.90E-115
PF12854.10PPR_12322641.90E-115
PF12854.10PPR_13023341.90E-115
PF12854.10PPR_13373691.90E-115
PF12854.10PPR_13714031.90E-115
PF12854.10PPR_14534841.90E-115
PF01535.23PPR981282.00E-90
PF01535.23PPR1331632.00E-90
PF01535.23PPR2402682.00E-90
PF01535.23PPR3083372.00E-90
PF01535.23PPR3433732.00E-90
PF01535.23PPR3784082.00E-90
PF13812.9PPR_31181772.50E-62
PF13812.9PPR_31892472.50E-62
PF13812.9PPR_32953512.50E-62
PF13812.9PPR_33654192.50E-62
PF17177.7PPR_long1151882.70E-36
PF17177.7PPR_long1832722.70E-36
PF17177.7PPR_long3314272.70E-36
Gene family
Gene familySubfamily
Carbohydrate-Active enzymes FamilyGT1

Gene Ontology
GO termDescriptionCategory
GO:0008380RNA splicingBiological Process
GO:0009507chloroplastCellular Component
GO:0010019chloroplast-nucleus signaling pathwayBiological Process
GO:0031930mitochondria-nucleus signaling pathwayBiological Process
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR002885Pentatricopeptide repeat

trEMBL
trEMBL termDescription
A0A1S2Y7D9 _

SwissProt
SwissProt termDescription
PP440_ARATHPentatricopeptide repeat-containing protein At5g61400

KEGG
KODescriptionEnzyme
K17710pentatricopeptide repeat domain-containing protein 1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G61400 Pentatricopeptide repeat (PPR) superfamily protein
Medicago sativa L.MsG0380013083.01.T01 _
Oryza sativa L.LOC_Os09g25050.1PPR repeat domain containing protein, putative, expressed
Cucumis sativus L.Csa012685 _
Glycyrrhiza uralensis Fisch.Glyur000020s00001834.1 _
Codonopsis lanceolataCl_chr02_25630T _
Arachis hypogaea L.AH08G30570.1Pentatricopeptide repeat-containing protein At5g61400 like

Expression pattern