Detail information of Am03G031900.1 Annotation
Gene IDAnnotation
Am03G031900.1 RING-H2 finger C1A
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am03G031900.1mRNAChr03153752685153754601-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13639.9zf-RING_21942362.30E-11
PF13923.9zf-C3HC4_21952351.50E-09
PF14369.9zinc_ribbon_96365.40E-09
PF17123.8zf-RING_111952224.70E-08
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
GO:0061630ubiquitin protein ligase activityMolecular Function
GO:0016567protein ubiquitinationBiological Process
GO:0005737cytoplasmCellular Component
GO:0046872metal ion bindingMolecular Function
GO:0016874ligase activityMolecular Function

InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR039525E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon

trEMBL
trEMBL termDescription
A0A2K3NCU6 _

SwissProt
SwissProt termDescription
RHC1A_ARATHProbable E3 ubiquitin-protein ligase RHC1A

KEGG
KODescriptionEnzyme
K11982E3 ubiquitin-protein ligase RNF115/126[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G40830 RING-H2 finger C1A
Medicago sativa L.MsG0380013339.01.T01 _
Oryza sativa L.LOC_Os03g22830.2zinc finger, C3HC4 type domain containing protein, expressed
Cucumis sativus L.Csa013274 _
Glycyrrhiza uralensis Fisch.Glyur000834s00025311.1 _
Codonopsis lanceolataCl_chr05_36170T _
Arachis hypogaea L.AH13G05250.1RING finger protein 126 family like

Expression pattern