Gene detail

Detail information of Am03G029780.1 Annotation

Gene ID	Annotation
Am03G029780.1	ATPase, F1 complex, gamma subunit protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G029780.1	mRNA	Chr03	123533162	123534655	+

Sequences

CDS:

>Am03G029780.1
ATGTTTTCCTCCATTCTCCCAAACGGGATCCCCTCAAAATCCCACCTTTCTCATCCCAAACCCCGCTTCCCTCACATTCCAATCCGTTGCGGAATCCGTGAACTCCGAGAACGAATCGCCACCGTCAAAAACACCCAAAAAATCACCGAAGCAATGAAACTAGTAGCCGCCGCCAGAGTCCGTCGAGCCCAAGAAGCCGTCGTCAACGGCCGACCCTTCTCCGAAACCCTAGCTCAAGTTCTCCACGACATCAACCAACGCCTCCAAAACGACGACGTTGAAGTCCCTTTAACCGCCGTTAGGCCCGTTAAAAACGTCGCCCTCGTCGTCATCACAGGTGATCGTGGTCTTTGTGGTGGTTTCAATAACGCCGTTTTGAAAAAAGCTGAGTCAAGGATTCAACAATTGAAGAAACTAGGGTTAGGTTGTGTTGTCATTAGTGTTGGTAAAAAGGGTAACTCGTTTTTCATTCGTACCCCTTTAGTTGAAGTTGATAGGTTTATTGAAAATAATGGTTTTCCTACTACTAAAGAAGCTCAAATTATTGCTGATGATGTTTTTTCACTTTTTGTTAGTGAACAAGTTGATAAAGTTGAACTTGTGTTTACAAAGTTTGTGTCTTTTATCAAGTTTGATCCTGTTATTCAAACGTTGTTACCTTTGTCTAAAAAAGGAGAAGTTTTTGATGTGAATGGGAATTGTGTTGATGTTTTAGGAGATGAGTTTTTTAGGTTGACTTCGAAGGATGGAAAGTTGACTGTGAAGAGGGATATTGTGGGAATTAAGGAGAAAAATAAGAAGAATGATGAGTTTGTTCCAATTATGGAATTTGAACAAGATCCAGCTCAGATTCTTGATGCAATGATGCCACTTTATTTGAATAGTCAGATTTTGAGAGCATTGCAAGAGTCATTGGCTAGTGAACTTGCTGCTAGAATGGGTGCTATGTCTAATGCTACTGATAATGCTGTTGAGTTGAGTAAGAATCTTTCAATGGCTTATAATAGAGAAAGACAGGCTAAGATTACTGGGGAGATTTTGGAGATTGTGGCTGGAGCTGAGGCACTAACACCAATAGTTTGA

Protein:

Promoter(3k):

>AM03G029780.1
ATGACAATCCCCGGCAACGGCGCCAAAAACTTGTTGTGCAAAAAGGTGTGCAAGTGTACACAGTTTTTAACAAGTAATATAGTAGAAAGTAGAGATCGTACCCACAGGGATTGGATTAATTTCTAAAGTTTAAAATGGTAGTTTAACTAGTGAGAAACTAGTAATAAAATAACAACTAAAATAAGAGTATGTGTGAGATAACAGAAAACAAATAAGCTAAGTAAAGATAGAGTGTATTCAAGTGAGAAAGATAGTTAGAATGCCCTTCACTAAGTAAATCACTTTGGATAGCATTATGTTATATATGATGCTCCTGCAATGGATGCTGTAGCAATTAATGCTGTAGCAATTAATGCTCCTGCAATGGATGCTCTAGCAATTGATGCGTGCTTTTCAGCAACTATCGTCAAGGTTTCATTACAAGTCTTATGTCTAAGCTCTAAATAAGTTCACCCATGTATACGAAGTACCCACAGTATCACCCTATGGACTATGCTATCCTATGTCTAGGTTTTAGCATGGAAATAACAAAGTTTCCTTCATTAAACACTTATCCATATTAGTTCATGAGTTCTAATCATAAACCATGTCTGTATTTATGATTTGCATTCACTTTTAGTTGGCCAATTCTAAAGATGAATATGAAAGAGTTATCATGCAAGAACTAAAATGCAAACATCAATATATAACATAATAACCTAATCAAAAGATCATTACAAAGTTAAAGCATACCAACTAGGAAGTTTAGCTCATGCTAGACATTACTGAGGACATACAAACAGAGATATCCATGTTCATATGTTTGATAATACAAAGGGAAGAAAATAAAGAAAGAATTACACGGTTGAAGTTCCCTTGCAAAAATCCGCCTAGTAATGTTCCAGCAATCAAACAGCAACACGAAATGGTGTAGAAGTAGAAAGAGAAGTTATCAATTTCAGCTCCCTCCTTCATACCTATGAAGTGTAAGTGATTCTAATTCTCTAACTTGGTGTCTCTTCAAATGAGGAGAAGGAGATGTATTTATAGGCTCATTGAGAGAGGTTTCCTTCATGATGGGGTTTGCTTGGGGCTGAAGTGTGATTTGCTTTTTAAGTCCAATTGCATCAAAAGTTGATTTGAAGTTGATTTGGAATAAAGAAGAGAGGTCCTATGATATGTGGACATGTGTACCTAAAAAGGTGCAAGTTACAAGCTATTGTGGGCTACAAAGGTGATCCAAGTGATCCACTTGCATTACTTTCCGCAATCTTTGACTATGAGCTCATCATGACATCATCACCAGATTGCTGGGGCATTTTAGTCTGTCACGAATGCTGGAGCATTTGACTGCCATTGATGCTGGGGCAATGATTGCTGGGACATCTGATGATGTATCATTGAACAAACACATTAAAATACCACATGGGGCACTAAAAGTTTCAAATGATCCCAAATCAGTTCCCAACCCTCTTTTACTCTAAACAACACATATTAACTACTTTAACAACAATATTACTCAAACTCACATTGATTTAAGTCTAGAACATATAAATAACTCTATATAAATAAGAGTTATTAGTGAACCTCCTCACTCCGCTTTTAAAGGCCTTGCTCCTTCACTTGATCTTGCAACTGCTCCCACGTTCTGTCTCCGTGCCCTCTCTTACTTGCCTTCCAAACAATCCTGCCCTACCTCAGGCACTTGGCTTACTCAGTTTGCCTGCGTCCTCGGACAGTAACTCAGGCACCCGAGCCCACCTCGGCTGTGGCACTCTATAGGCTGAGGCTTTGCTCTCCCCCGGCCTTGCTTATTGCTCATCGGGCTGACCCCTTCCTCGTGGAGTTGTCTTGTGGAGTGCCCCGAGGGCTTTTCTTGAGTTCTTCTCTCTGGCAATTATCTTTCAAACCTTTGTCCAGTGGCCTGCCTCAGCACTTCAATTCTACTCTCTTCCTTCACTCGGCCCTCGGCCTACGACTCAGTTATTTTTGGGTGTTAACAATTACATTATTTTTACCTGGCCTCTGAGAATCATAGATGCTACATGAGCATCAAATGCAGTGAGCAAAAAACCATCCATAGGTCCTATGCGAGCATGATGCTCATCAACATCCATATCATGCTGGTACTACTGCTCTTGGTACTGATGTTGGTAATGCTCCTGGAACTGCTCTCCCCTGGTAATGCTGCTGGTACTCTTGATGGTACTCTGTCTCCTGCTGGTACTGCTCCTCATGTACCTCATCCTTCGTATACTGCTGTCGTCTCTGCATGCGTCTATGTCGGTTTGACGCATGTCCAGCCTCTCTAATCCGAGTGCGTGTGACGAAGACCCCCCTCCCAATATCAATCCCGGTGAATCACGGGGAATTCGGCCACCGACTCTGGTACGAGCCACTGCCAAAAATAAAAAAAAACAATTAAAAAACAAAAACGGAAGTAAGGTACTTCCGCAGGCCAATACAACACATACGGAAGTTGGTACTTCCGCAGAGATGAAAACGGAATTACTTACTTCTGTGTGTAGATGAAAATGGAAGTAGGTACTTCCGCAGAAACGATAACAGAACTAAGTACTTCCGCAGAGACAAAAACGGAACTAGGTACTTCCGTTCAGAACAAAAACACAACTATCTCTTTCTCTCCCACAGATGTAAGTGAAAAATGGTAAATGTTTTAGACTTTTGTAAAAATTTTAAGGGTATTTTCGTCCTTTCACACCCAGCGTGGGGTATACCGTGTATATGTGGGGTACCCAAAAAAAACCCAAACAGCAAAGAGACCCAACAATTTGAGGCAAAGAAAGCCCAATTTCCCCAAAGCCCAACCCCCTACCTCTTCTCCAAAAGACTTCCTCGGCAATTCTGACCAAAAAAAAAAAAGACTTCCTCGGCAGGCAAACGGCACGTTGACAGTTGCAGTAGCAACTAGCAACCGTCCAGCCACCCACCAACTCCAAAACCAAAAAACCCACAACTTCCCAAAAACCCCATCTCATCTCTTCTCATCACCAAACCCCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00231.22	ATP-synt	32	356	8.40E-87

Gene family

Gene family	Subfamily
Transporter family	F-ATPase

Gene Ontology

GO term	Description	Category
GO:0009535	chloroplast thylakoid membrane	Cellular Component
GO:0016787	hydrolase activity	Molecular Function
GO:1902600	proton transmembrane transport	Biological Process
GO:2000067	regulation of root morphogenesis	Biological Process
GO:0010150	leaf senescence	Biological Process

InterPro

InterPro term	Description
IPR035968	ATP synthase, F1 complex, gamma subunit superfamily
IPR023632	ATP synthase, F1 complex, gamma subunit conserved site
IPR000131	ATP synthase, F1 complex, gamma subunit

trEMBL

trEMBL term	Description
A0A9D5AJ54	_

SwissProt

SwissProt term	Description
ATPG_TOBAC	ATP synthase gamma chain, chloroplastic

KEGG

KO	Description	Enzyme
K02115	F-type H+-transporting ATPase subunit gamma

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G15700	ATPase, F1 complex, gamma subunit protein
Medicago sativa L.	MsG0380014176.01.T01	_
Oryza sativa L.	LOC_Os07g32880.1	ATP synthase gamma chain, putative, expressed
Cucumis sativus L.	Csa026590	_
Glycyrrhiza uralensis Fisch.	Glyur000029s00003581.1	_
Codonopsis lanceolata	Cl_chr03_28040T	_
Arachis hypogaea L.	AH11G07560.2	ATP synthase gamma chain 2, chloroplastic like

Expression pattern