Gene detail

Detail information of Am03G028540.1 Annotation

Gene ID	Annotation
Am03G028540.1	multidrug resistance-associated protein 3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G028540.1	mRNA	Chr03	107210251	107224918	+

Sequences

CDS:

>Am03G028540.1
ATGAGCAAACTTTCCTCTCTTGAGGAGTCTCTTTTGAATGGTGACTCTAGTGTAAGCAACAATTCTGATCCCAAAAAGACCTGTTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATGAGTGAACTAATAACTTTAGGCAATAAGAAGAGATTAGACCATGAAGATCTCCCACTGCTTGCTATCAATGACACTGCCCATGGGGCTTTTCAAACCTTTAGAAACAAGCTTGAGTCTGAATGTGGTAGTGTTAAGAGTGTGACCACACTTAAACTGGTCAAGGTGTTAATCATCTCGACATCGGGGGGGATCTTTTTGTCGGGTTTATTCGCGTTCCTGTACACGTTGGCTTCTTATGTTGGACCATACCTTATTGAAAATCTTGTTCAATACCTTAATGAGGAAAACAAGTCAAAAAAAGAAGGTTATATTTTGGCTATGGCATTTATTGTTGCAAAGGTTCTTGAGTGTCTTTCTATGAGGCATTGGATGTTTAAGTTCCAACAAGTTGGTGTTAGGATGCAATCGATGTTGGTGGCGATGATCTACGCTAAAGGTTTGACCCTTTCGTGTCAATCGAAGGAGGGAAACAGCAGCGGCGAAATTATCAACTTAATGACTGTTGATGCTGCAAGGATTGGTGAGTTTTGTTGGTACATGCATGATCCATGGATGGCTGTTTTGCAAGTTGCTTTGGCTTTGTTTATTCTTCATAGAAGTGTAGGGATTGCTTCGTTAGCGGCTTTAGCTGCTACCGTAATTGTGATGCTGCTAAACTTTCCTGTTGCATCATTACAAGAAAAATTCCAAGCTAAGTTGATGGAGTTCAAGGATAAAAGAATGAAGGTGACATCCGAGATTCTAATGAATATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAATTCTTATCGAAGATTCTTCGTCTTAGGAAGGCCGAGGAGACGTGGCTAAAGAAATTTCTTGTTGGTACCGCAATTGTTAGATTTCTCTTCTTTAATGCTCCGACGTTTGTTGCCGTGGTTACTTTTGGTACTTGTGTTCTTATAGGCATCCCACTTGAATCAGGAAAGATTTTATCTGCTCTTGCAACATTCAAAATTCTTCAAACGCCGATCTACAGTCTTCCTGACACAATGTCAATGATTGCACAAACTAAGGTTTCCGTAGATAGGATTGTAGCATTTCTTCGTCTAGATGAGCTGCCGATCGATGTAGTTGAGAAGCTTCCACGGGGTAGTTCTGATATAGCAATTGAATTAATAGATGGAAATTTCTCTTGGGACTTATCTTCTTCTGCCAATACAACATTGAAAGACATAAATCTTAAAGTTTTTCATGGCATGAGGGTTGCTGTTTGTGGTACTGTGGGATCAGGTAAATCTAGTTTACTTTCTTGTATAATAGGGGAAGCTTATGTTGCTCAATCACCATGGATACAGAGTGGCAAGATAGAAGAGAACATACTATTTGGTAAAGAGATGGACAAGGAAAAGTATGAGAGGGTGCTACAAGCATGTTCCTTGAAGAAAGACTTAGAGGTTTTACCATTTGGTGATCAGACCATTATTGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATTGCCCGTGCTCTTTACCAAGATGCTGATATATATCTTCTCGACGATCCCTTTAGTGCTGTCGATGCTCATACAGGATCCCATATCTTTAAGGAATGTTTGCTTGGCCTTTTGAAAACAAAAACTGTGATATACATAACCCATCAAGTAGAGTTCTTACCTGATGCTGATCTGATATTGGTCATGAAAGGAGGAAGGATAACTCAATCAGGAAAATACGATGACATTCTTAAGTCGGGCACTGATTTTATGGAACTTGTAGGCGCACATAGAGCAGCTTTGTCCTCAATTAAGTCCTTAGAGAGAAGGCCCACATTTAAAACATTGAGTTTTACCAGTGAAGACAGCGGTTCATTAAATGATTTCGAACTTGAGGAAGAAGTGGAAAACATAGATGATCAAAATGGCAAGCCAGAAGAGACAGTTGATCGAAAAGGCCAACTTGTTAAAGAAGAAGAACGAGAAAAGGGTAGAGTCGAGTTTAAAGTCTTTTGGAAATACATTACAGCAGCTTATGGAGGAGCTCTTGTACCCTTCATATTACTTTCACAGATACTCACTGTGGTTTTCCAGATTGGAAGCAGTTACTGGATGGCTTTGGCAACTCCTGTTTCAGCAACTGATGAACCTGATATTGGGAGTCTTACTCTTATGGTTGTCTATGTTTCTTTGTCAATTGGAAGTTCCTTTTTCACCCTTGCCAGAGCAGTTCTTGGTGTGATAGCTGGATACAAGACAGCCACATTGCTCTTCCATAAAATGCATTTGTGCTTTATTCGAGCACCAATGTCATTTTTCGATGCCACCCCAAGTGGGCGAATTCTTAATAGAGCTTCAACAGATCAAAGTGCATTAGACATGACCCTTCCAAATATAGCATGGGGATTTACCAACAATATGATTCAGCTCTTGGGAAATGTTGCTGTGATGTCTCAAGCTGCATGGCAGGTGTTTATAGTATTGATTCCTGTCATGGCAGCTTGCATATGGTACCAGCGATACTACTCATCATCAGCCCGGGAATTGGCACGACTTGTGGGTATATGTCAAGCTCCAGTTATACAACATTTTTCTGAAACCATTTCTGGATCAACAACCATTAGAAGTTTTGAGCAAGAGTCAAGATTTAATGAAATAAATTTGATATTGATAGATAAATATTCTCAACCCAAATTATACAGTGCTAGTGCAATGGAATGGCTGAGTTTCAGATTGGATATTTTGTCCTCTACCATATTTGCCTTCTGTTTGGTTTTCTTGATATCCTTTCCAAGTTCAATAGCTGCTCCTGGTATTGCGGGTTTGGCTGTGACGTATGGGCTTAATCTAAATGCTGTACAATCTAATGTGATATGGTTTCTTTGCAATTTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACCTCCATCCCAAGTGAAGCTCCTCTTGTATTAAAAGACAACCAACCAGATCATTCTTGGCCATCATTCGGAGAGGTCCATATCCATGATTTAAAGGTACAATATGCTCCTCACTTGCCTCTTGTTTTACGTGGAATTACCTGCACATTTACTGCTGGAGCAAGAAATGGAATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTTGTGCAAGCACTTTTCAGACTTGTTGAACCTGTTGCTGGAGAAATACTGATAGATAACATTAACATCTCTTTGATTGGAATTCATGATTTAAGGTCCAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGCACTGTAAGAAGCAACCTGGACCCGCTGGAAGAGTATACAGATGAGCAGATTTGGGAGGCTCTAGAAAAATGTCAACTAGGAGATGAAGTAAGGAATAAAGAAGCGAAGCTTGATTCCTTGGTTACCGAGAATGGAGAAAATTGGAGTATGGGTCAAAGGCAGTTAGTATGCCTTGGCCGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTTGATGAAGCTACTGCATCAGTCGATACAGCTACAGATAATATTATTCAACAGACAGTTAAGGAACATTTCTCAGAATGCACAGTCATTACTATTGCTCATAGAATAACTTCGATAGTTGATAGCGACATGGTTCTCGTTCTCGGTGAAGGGCTTATTGAGGAATATGATTCACCAAAGAAATTGCTTAAGAACAAATCTTCATCTCTTGCCCAACTAGTTGCAGAATACACAAGAAGGTCAAACTCTGGTTTCGGAAGTTGA

Protein:

>Am03G028540.1
MSKLSSLEESLLNGDSSVSNNSDPKKTCYSNAGFFSILTFSWMSELITLGNKKRLDHEDLPLLAINDTAHGAFQTFRNKLESECGSVKSVTTLKLVKVLIISTSGGIFLSGLFAFLYTLASYVGPYLIENLVQYLNEENKSKKEGYILAMAFIVAKVLECLSMRHWMFKFQQVGVRMQSMLVAMIYAKGLTLSCQSKEGNSSGEIINLMTVDAARIGEFCWYMHDPWMAVLQVALALFILHRSVGIASLAALAATVIVMLLNFPVASLQEKFQAKLMEFKDKRMKVTSEILMNMRILKLQAWEMKFLSKILRLRKAEETWLKKFLVGTAIVRFLFFNAPTFVAVVTFGTCVLIGIPLESGKILSALATFKILQTPIYSLPDTMSMIAQTKVSVDRIVAFLRLDELPIDVVEKLPRGSSDIAIELIDGNFSWDLSSSANTTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCIIGEAYVAQSPWIQSGKIEENILFGKEMDKEKYERVLQACSLKKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHIFKECLLGLLKTKTVIYITHQVEFLPDADLILVMKGGRITQSGKYDDILKSGTDFMELVGAHRAALSSIKSLERRPTFKTLSFTSEDSGSLNDFELEEEVENIDDQNGKPEETVDRKGQLVKEEEREKGRVEFKVFWKYITAAYGGALVPFILLSQILTVVFQIGSSYWMALATPVSATDEPDIGSLTLMVVYVSLSIGSSFFTLARAVLGVIAGYKTATLLFHKMHLCFIRAPMSFFDATPSGRILNRASTDQSALDMTLPNIAWGFTNNMIQLLGNVAVMSQAAWQVFIVLIPVMAACIWYQRYYSSSARELARLVGICQAPVIQHFSETISGSTTIRSFEQESRFNEINLILIDKYSQPKLYSASAMEWLSFRLDILSSTIFAFCLVFLISFPSSIAAPGIAGLAVTYGLNLNAVQSNVIWFLCNLENKIISVERILQYTSIPSEAPLVLKDNQPDHSWPSFGEVHIHDLKVQYAPHLPLVLRGITCTFTAGARNGIVGRTGSGKSTLVQALFRLVEPVAGEILIDNINISLIGIHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALEKCQLGDEVRNKEAKLDSLVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKEHFSECTVITIAHRITSIVDSDMVLVLGEGLIEEYDSPKKLLKNKSSSLAQLVAEYTRRSNSGFGS*

Promoter(3k):

>AM03G028540.1
TATTATCTTCCATGAAGCAAGGCCAAGGCAACTAACTACAAGGTATATCACGTGCATTGTAGAGTGCTTGTGCAAAAGTCTTTTATTGTGGGGACAGAGATGATACAGTAGTACTAGAGGAATGGTCACGAGGAGGAGATGATGAGGGTCATGACAACGAGAGAGGAATATTAGTCATTCTTTTTAGTCACTCTTAGAGATATTCATATATGAAATTGTCATGAATTTCATTTCTATTCCTGCTACTACTTACACCCTAATTTACTGGATGCACCCTTTTTATGATTCAATATTGTATCTTACCTTTCCTTTCCTTTAATATTAACCACTCACTTCCTTACTCAATAAAACTTCTGTTTTTGTTGGATACTCTATCTTCTAATCTTAAGAAATTTGGGCTTCCAAAAATAATATTGAATTCAAACTAAAATTCTTCTATTTAAAAACTATAAATGATTTAGAGTTAAATACACTTTTAATCCCGTAAAAATTATGTGTTAAATCTGCATTTATTTCCAAGTTTCTAAAAAGAATGATTCAATTTAGTCCTATTTTGAAAACTTTTTACGAAAATGGGTGATTTTATTCCTTGTATTGTAAAAGGAGGGGCTAAAAATGAATAATTTTTATTTAGAGTTTTAAAAATAGAGACTAAACTTGAGAAGCTGGAATGTTAAATTAACTAAAAATATATTTAACTCAAAGAATATATATTATTAAACAAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATAATAATATTTTGTGGAAGCACGAATTAGCTGACTATTGTTTGACTGTTATCTCAAGGGAATAAAGGGAAAGCCCCTTGTATCTATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGCTATTATTTCACTAATATATATATATATATATATATATATATATATATATATATATTAATTTGATACCTATGTAGTCTAATTTGGACGTGTCAAGTCTTTTTACATTATTACTTTTATTATTCTAATTCTATTATAAATTGAGATATAGACATATAAAAACAAGGCTAAATAGCATTTTTGGTCATTTATCTTTGCTCCAGATTTCACTTTGGTCCTTTATCTTTTTTTTGGTCCGTTTTGGTCATTTATCTTTCATTTTTGTTTCACTTTGGTCCTTTATCTTTTTTTGGGTCCGTTTTGGTCATTTATTTTTCATTTTCGTTTCATTTTGGTCCCTCACGTTATTATTTAATTCAATTAAAACATTAAAACAATTAAAACAATTAATTAAATTAAAACAATTAAATAAATAAAACATAAACCCCCCACCATCCACCACCACCCACCACCACCCACAACCACCCACCACCGTCAACCACCACCCACCACCACCACCTCCCACCACCACCCACCACTCTGTAAATGAATTAAGAAAGAAAGGAAAGGGGAGAAACAGAGAAAGGAAAGAAGAAAGATGGAAGAGAAAAGGAAGAATGAGTTTGGGTGAAGAAGAGGGAAAATGAGCATCCAAGGCTCATCAAATCATCATCCATCCAACATGAAAGTTGATCACCATTTTATCCTCTTCAATTTGATACCAACATCATCTCCAACAATTCACTCTCTCATATTTTGCCATTTTCGAGTTTGAGCTTGAGCTTTCTTCTTCCTTCAAACAGTGTGCTCAAGGGTGTGTTGTTGTAGCCATGGCCATCTAAAAATTCTCCAAACAGTGTGCGCAATGTTAAAGATTAGTTCAGCAACAAATTTCAACAATGGAGGTGTGAGGTGGGTGGTGGTTGACGGTGGTGGGTAGTGGTTGACGGTGGTGGGTGGTGGTGGACGGTGGGGGGGTTTATGTTTTATTTATTTAATTGTTTTAATTGAATTAATTGTTTTAATTGTTTTAATGTTTTAATTGAATTAAATAATAACGTGAGGGACCAAAATGAAACGAAAATGAAAGATAAAGGACCAAAACGGACCAAAAAAAGATAAAGGACCAAAGTGAAACAAAAATGAAAGATAAATGACCAAAACGGACCAAAAAAAAGATAAAGAACCAAAGTGAAATCTGGAACAAAGATAAATGACCAAAAATGCTATTTAGCCTAAAAACAATTTTGAAAATGACATAAAAAACAATTTTTTTTTCTAAACAACCGCCATATGATGGACGGACATCATGATCTTTGAAAGCTGCGACCATAGAAATATACGTCATTTGCTGGTCATCACAAGTTTCAAAATTGATGTTTGAAACTTCTCTCTTGCATTCATATCAACATCATGGGCGTCTTCCTAAGCTGCCACCTTATCAAAATTGACGAATTATATGATTTCCTTTTCTATCTCATTCTCACACTGTTCACAGAACTCTCGCTTTAGAGTAAAGTCAACAAGTCAACCATTAATCACTACCCACAAGTTGTTTCTTTCTTTGTTTAAGGTATGTATGCTATTTCTCTTCTTCACTATACTCATCCATTGGTAACAGTTTCCCTTGTTTGTTGAGAATTTGGTGCTTGGTCTAATCTAAACCTTTGATTCTTCTTTTTGTCTTGTTGCTAGTCAACAGGTCAATCATGAATCACCATCAAAAGAATCTACCCCAAGTGGTTTCTTTTTTTGTGTAAGGTATGTATGCTATTACTCTTCTCTCATTAGTCCTCCATCATGCAACTTGGAAACACTTTCCCTTGTTTAAGGTATCTAATCCTTTGATTCTTCTTGTTACCTTGTTACAGAATTTGTAATCTATGGAAAGCATGTTTTCTTGCCAAATCCCATACCTTGTTTTTTAGTATAGGTTCTACTAGTACTGGTTTATTTCGTATCAGTCCCAAGTAGGTAGCTCGGTTAGTGAGCTAAGGAAGAATTCTAATCATGGAAACTAACATTTCCACTCTAACTAATTAACTACTAACATTTGCTTATCAACAAAAAAAATATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00664.26	ABC_membrane	107	375	8.30E-52
PF00664.26	ABC_membrane	722	964	8.30E-52
PF00005.30	ABC_tran	441	488	1.50E-51
PF00005.30	ABC_tran	476	561	1.50E-51
PF00005.30	ABC_tran	1056	1204	1.50E-51

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0140359	ABC-type transporter activity	Molecular Function
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR036640	ABC transporter type 1, transmembrane domain superfamily
IPR011527	ABC transporter type 1, transmembrane domain
IPR044726	ABC transporter C family, six-transmembrane helical domain 2
IPR044746	ABC transporter C family, six-transmembrane helical domain 1
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A1S3EAX7	_

SwissProt

SwissProt term	Description
AB3C_ARATH	ABC transporter C family member 3

KEGG

KO	Description	Enzyme
K05666	ATP-binding cassette, subfamily C (CFTR/MRP), member 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G13080	multidrug resistance-associated protein 3
Medicago sativa L.	MsG0480021564.01.T01	_
Oryza sativa L.	LOC_Os01g07870.1	ABC transporter family protein, putative, expressed
Cucumis sativus L.	Csa021412	_
Glycyrrhiza uralensis Fisch.	Glyur000870s00029775.1	_
Codonopsis lanceolata	Cl_chr04_28180T	_
Arachis hypogaea L.	AH11G06290.1	ABC transporter C family member 3 like

Expression pattern