Gene detail

Detail information of Am03G027890.1 Annotation

Gene ID	Annotation
Am03G027890.1	ABC-2 type transporter family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G027890.1	mRNA	Chr03	102071381	102076088	-

Sequences

CDS:

>Am03G027890.1
ATGGAAATTGGCATAGAGGATGAGATTGCGGACATGTCAATGTCACCTCCTTCAAGGGGTTCTATGAAGATACCAAGGAGCAATGATTTTGGTCACAACAAAGAGTTAATGTCAAAGAAAAGGTACTCAGAGATTGACATAGAAATTGAAGACACAAGTTTCAACCAAAATGGCCCCCTCCCCATATTTCTAAAGTTTGAAGATGTAGAGTATAAAGTGAGAAATAGCAAAGTAGGCTCTAATAACCCTGTGAAGGCAGTGGTGTCAAAGGTAGCCACAAACCTCACTAATGAAGAAGATAGATACAAGAAAATTTTGAAGGGCATCACTGGAAGCATTGGCCCTGGTGAAATTCTTGCCTTGATGGGACCTTCTGGCAGTGGAAAGACAACCTTATTAAGAGTCATAGGAGGAAGATTACTTGACAATGTAAAGGGAAAAATAACTTACAATGATGTTAGATTTACTCCAGCTGTCAAGAGAAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTTCCACAATTGACAGTAGAAGAAACATTAGTCTTCTCTGCATTCTTGAGGCTACCAACAAATATGACCAAGCAGCAAAAATATGCAAAAGTGGAGACAACTATAAAGGAACTAGGTCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATTTCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGATCCCTCATTGCTGCTTCTTGATGAACCAACTTCTGGTCTTGATTCCACCTCAGCAAACAAACTCCTTGTCACACTCCAAGGACTAGCTAAGGGTGGAAGGACCATTATCACAACAATACATCAACCATCAAGCAGAATCTTTCACATGTTTGACAAACTTCTTTTGATATCAGAAGGATATCCTATTTACTATGGCTCATCTAGAGAAACAATGGAGTACTTTTTAACCTTGAGGTTCAGCCCTGAAATAGCAATGAATCCTGCAGAGTTCTTGCTTGATTTGGCAACTGGACAAGTGAATGACATAAGTGTTCCAACAGATATTTTTGAAGATCAAGAATCTGCTGACCCTTCCAAAGCTGTTATTAAATATCTACAACTCAAGTATAAAGCTTTACTAGAGCCAAAAGAAAAAGAGAACCATAGAGGAGTAAGCACACCAGAACACCTTCAACTAGCCATTCAAGTTAAGAAAGAATGGACATTGAGTTGGTTGGACCAATTTGTGATTCTTTCTAAGAGAACATTCAAAGCAAGATGCAAGGACTATTTTGATAAGTTAAGACTTGTTCAAGCAGTTGGAGTTGCACTTTTGTTGGGACTTCTCTGGTGGAAATCTTCAACCAATACAGAAGCTCAACTCAGAGATCAGGTTGGTTTAGCCTTCTACATATGTATATTCTGGACATCATCATGCATTTTTGGAGCAGTCTATGTGTTTCCATTTGAAAAATACTACTTGATAAAAGAAAGGAAAGCTGACATGTATAGATTAAGTGTATACTATGCATGCAGCACACTATGTGACATGGTAGCACATGTTTTCTATCCTACCTTTTTCATGATTATTGTCTACTTCATGGCTGGATTTAAGAGGACTGTTGCTTGCTTCTTCTTGACATTATTCACCGTTCTACTTATAGCTATAACAAGTCAAGGTGCAGGAGAACTATTTGGAGCTGCAGTTATGAGTATTAAAAGAGCAGGAATGGCTGCTTCTTTGATACTCATGCTATTCCTTCTTACTGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAGTGGTTGAAGTATTTGTCATTCATGTACTATGGATTTAGGCTTCTCCTAAAGGTGCAATATTCAGGAGACCAACTATATGATTGCGAAAGCAAAGGAGGTTGTAGAACATTGCAGAGTTCACCTACATTTGACACTGTAAACTTGAAAGGTGGCTTAAAAGAAGTTTGGGTTATGGTTGCCATGGCTATATGCTTCCGCTTGTTAGCTTACTTCTTCCTCCGTAGAAGAATTGATGTCTGA

Protein:

Promoter(3k):

>AM03G027890.1
TTAAATAATACTTTTACATTTTTAGATTTTAATATTTATCTATTTTTTATTTGAAACTCTTTTTTATCTAGTTTAAATTTGTCTTTATTTTCACGGGGTAATGTTCAGACTATTTAAATATTGTCTAAGTTCATTCATAAAAAGAACACGATAGCATCCGTGCGTATGCACGGGTATCCTACTTGTGTATATGGAAATAAATGGGAGTACAAAATGTATATGGAAATAAAAGGGTTGAAGTAGTTCCAAAAGATGTTTTTGTCCTTTCAAAACTAATATTTCCTGTTATGGTAAATAGAAGTTCTGCTATTCACACCTCCTGCAAGGCCCAATTATTCAGAGGCCCATTACATAGAAACAGGGTCCATTCATCAATGACCAAGATCACTCTACAAGATCGGACGGCCCAAATCGACCAAAGCAAACACCACTCAAAATCTATAAATACAGCATTCAATGCTCATTAAATGGTAAGCACTTTTCCAACACAATACTCATTTAACTCAAATACTGACTTGAGCGTCAGAGTGTTATTGCAGGAACAACATCGGACACCTCAAGATCGAACAACATCGAACATCTCAAGATCGAACATCGAACATCTCAAGATCGACCGAACGTCGAACATCTCAAGACCTGAACATTAAAACAGAATCAAGGATAAAACACCTACTAACTGCATAATACCGATCACCAAGATCGAAAGCACAGTACAGAACATTTCCTATGTGCCGGATACGAATCAAAGATTAGTCAACCAATTGACAAAATTATAACAACTGTTTCTATTGACCTTACTAATAAACCAAGTCCATGAAAAGCCCTTATAATGCTATTGACAATTTTTGAAAGATCACCTACATCACCTTTGAATAGTATGTTGTTTCTCATATTCCACGTGCATCATGTAGCAGCTAACCAAATCAACATTTTGGCCCTTTTAGTCTTCTTTCCTTTTACCATGTTCTGGTGGAACTCTAAAAATGTGAAGATAAGTTACATGAAAAGAAGATATGGCAGCATGTTTCATCTTGAATAAAACATATGACACAAGTCGAGCAATATCTCTGTGTTACCATCCCTTTTGAATAATTCATTGCGTGTTGGCAGCCTTGATAATAATGGTTTCCAACCGAAAATATGGATTTTGGAAGAGACTGCATTTTTCAACAATTTTTTGAAGGCCACAAATTGGACCCTTTGATGCAAATCGCTTCGGCCAGTAGCAATTAGAGTTTAATCGTATTAAAATTTGGACAAGCGGTTGGTGAAACATAGTTCTTTTCTTTCACCGTTCGGATCGTTGAAAAAAGTCTGAGGTGAAAGAAATTGCCTTCGCACAGTAGCTATAAAATTGGGCATTTTTTCATCTTCATGTTATCAATTTGTAAGCCTTTGTGCTTTATTGTTTTGACTAATTGGCACCGTTTGTGCACATTATTGAGACTCTCTCTTGTACCCTTATTTGATTATAATGAAGCTATTTCTTTGGTCTGAACGATCTGTGGTTTTTACCCTTGCTCTCTGTTATTGTATTTATGTGTTGATTCCCCATCACCTAATTAGTTAAGGGGAAAATGAAATGTTAGTTTTCGGGGTTTGAACTCTGAATCTCCTGCATGTACCTATTCAGTGTTCTTTAGTTCACTAACTGCGCTACCTTCTTGGGTCACATTTTCATATATTTGAAGTTTTAATATTTTCTCAATAGAAAATATAATTTTGATATTAATTTATTATATTATTTTCTAATATTATTTTACTATATTGTTCATGACAAATATACTTTTTTAATTTACTATTATATATATATATATATATATATAGATATGTGTGTGTGTGAGTGAGGGCGACGAAACTCAACCCTAATTGAGAGCGTGAGTATGTGTCTCCTATTTGTAACTCCCATACGGATCTAGGGCGAGTTTTGTTCACACTAGTTCTGTGTCCTAATTTTGGAGGACCAAATTGGAAGCTCAATTTTTGGGTTTAACCTCGTCTGTTAACTATTTAAACCCCTATTAATGTCACATCACCTGCTCACTAACAAAGATTAACAGAAGTTAACATTTGGGATCAAACTCGATACGTTTTCATTTTGCAAAGACGTAATCAAAATTTTTTATTTTTACAAAGACTAAATTAAATCCAATACATATTTAAGCCGATTTTTATAGAGACAAAACATAAATTGTGCATTTTTATTTTTTATCCGTAAGACCTAGCTCAACGGAAAAGGCCAAAATTGTTAAGCTCGATATCATGTCGTTCGAACTCACACTGTTCACAAACCAGAAAAAAAAAAACCAATTTTTTTTATCCAACTGCAATCTAAGGGTTGAAGACCCGAGAGAAAGCTATTTGATAGTGTATTGGTTCTCTTCAACATTTAAGCTACAAAATAATATTGTATAAATTCTTTCTCAAAATCTCTGTCCACAAACCTTAGAATATTGTCGCAATCAATAATAAGAACCGACTCCAAGGTTAAATTGTGGACCACTTCATATAACTCAGATTATTTTTATATTATCTCACATTGCCCATAAGTGGATCTACAAAATAAACTTTCCATCACAACTTCAACTATTTAATTGGACTCACATTCTTTTCTCCCCATTCCTTTGTTAAAGAACTGTTGGTATATAATATGAAAAGCAAGCCAATGAGTGAAATCCATCAAAACAAATGCTGGAAAACCGGCAAAAATGAATTTTACATCTTAAAAAACCAAATATAATTGATTTTCTTGACATGTTTTTATGCATATAAAAATGGTTCAAAACTATACCAAAAAAATATGATAATGGTTGAAAGGGTATGCAAGTACTATAATACACCAACAAATTGGCATGAAAAGTATGTGGCATACCAACTAAAACTCTGCTTGCATATATAGGAAAGCTGTTGTTTTGATGCAGTTGACTCAACTCAACACATCTAAATGTTATTCTAATTCTAAACTTTATTTCAAACTAGTTCTTTGTAACTTGTGAGATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	412	620	2.20E-36
PF00005.30	ABC_tran	106	256	1.10E-26
PF19055.3	ABC2_membrane_7	285	346	1.90E-09

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0080110	sporopollenin biosynthetic process	Biological Process
GO:0010152	pollen maturation	Biological Process
GO:0071944	cell periphery	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0030638	polyketide metabolic process	Biological Process

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013525	ABC-2 type transporter
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A1S2Y3X7	_

SwissProt

SwissProt term	Description
AB26G_ARATH	ABC transporter G family member 26

KEGG

KO	Description	Enzyme
K05681	ATP-binding cassette, subfamily G (WHITE), member 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G13220	ABC-2 type transporter family protein
Medicago sativa L.	MsG0180003146.01.T01	_
Oryza sativa L.	LOC_Os06g40550.1	ABC-2 type transporter domain containing protein, expressed
Cucumis sativus L.	Csa020117	_
Glycyrrhiza uralensis Fisch.	Glyur000027s00001523.1	_
Codonopsis lanceolata	Cl_chr04_17510T	_
Arachis hypogaea L.	AH17G01680.1	ABC transporter G family member 26 like

Expression pattern