| Gene ID | Annotation |
|---|---|
| Am03G026980.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G026980.1 | mRNA | Chr03 | 95374753 | 95386646 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01485.24 | IBR | 119 | 180 | 2.80E-16 |
| PF01485.24 | IBR | 199 | 249 | 2.80E-16 |
| PF00097.28 | zf-C3HC4 | 49 | 96 | 7.70E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RBR |
| GO term | Description | Category |
|---|---|---|
| GO:0061630 | ubiquitin protein ligase activity | Molecular Function |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0008270 | zinc ion binding | Molecular Function |
| GO:0000209 | protein polyubiquitination | Biological Process |
| GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR018957 | Zinc finger, C3HC4 RING-type |
| IPR044066 | TRIAD supradomain |
| IPR002867 | IBR domain |
| IPR031127 | E3 ubiquitin ligase RBR family |
| trEMBL term | Description |
|---|---|
| A0A9D5AIK0 | _ |
| SwissProt term | Description |
|---|---|
| RGSL1_ARATH | E3 ubiquitin-protein ligase RSL1 |
| KO | Description | Enzyme |
|---|---|---|
| K11975 | E3 ubiquitin-protein ligase RNF144 | [EC: 2.3.2.31] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G14250 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0580028934.01.T03 | _ |
| Oryza sativa L. | LOC_Os08g35060.1 | protein binding protein, putative, expressed |
| Cucumis sativus L. | Csa013359 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000027s00001599.5 | _ |
| Codonopsis lanceolata | Cl_C19054_unscaffolded_00010T | _ |
| Arachis hypogaea L. | AH12G05790.1 | E3 ubiquitin-protein ligase RNF144A like |