Gene detail

Detail information of Am03G026580.1 Annotation

Gene ID	Annotation
Am03G026580.1	myb domain protein 119

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G026580.1	mRNA	Chr03	92498082	92500470	+

Sequences

CDS:

>Am03G026580.1
ATGAAGATCGCCAATCACTCTTCTACAGGTCCTCCTTTAACAGCCATAGATAGATTCTTATATGGTCAACATAGCCACTACCCTCAAAAGAAAGAGTCACAAAATGTTGATGATGATCATCTTTTGGCAAATGTTTCAGCTTATAATTTTCTATGGTCTAATAATAGTACTCAAGAGTCAAACGTTGTTGATCATCTTTTGGCTAATGAAGATGTCTTGAATTGGACACAACAAATGTGTATTGAGAATGAAGATGTTAATGTTTTAGGGAAGGGTGCAAAAGTTGTTGGAAGAAAACCTAGGAAAGTTTCTTCTATGTCTTTGATCAAAGGACAATGGACCGATGAAGAAGACAGGAAACTTTTGAAGTTGGTGAAGCAGCATGGTGTAAGAAAATGGTCTCAAATAGCTGAGAAGTTGGAAGGAAGGGTTGGCAAACAGTGTAGAGAAAGATGGCATAATCATCTGAGGCCTGATATTAAAAAAGATGATTGGAGTGAAGAAGAAGAGAGGATATTAGTAGAAACTCATGCAAAGATTGGAAATCGTTGGGCAGAGATTGCAAAGAGAATTCCTGGAAGAACTGAGAATGCAATAAAGAATCATTGGAATGCAACAAAAAGAAGGCAAAATTCAAGGAGAAAGAACAAAAGACCAGGAACTTCAAATGGAAAGCCACAGTCAACTATACTTCAAGACTATATAAAAAGTTTGACATTGACTCAAAGTCAAACCTCTTTCCACATCACTACTACTACTACTTCTAGCTCCACATCAGCAATTTCTGAAGACCCTTCTGAAACAACAACACTAATAGCTGAATCATATGATGAAGAGTTACTCTTCATGCAACAACTTTTCAAAGTGAATAATGCTGAACCTCTTAATCACTATTCCAAGAACTCTTCATTGGAAAATTATTCTCAAACTAATAGTGAGGTCACTGAATTAGGGTTTGTTCACTCCAATAATAATCCTAAGCCCAACTCACATTATAACATGTATTTGAATACTCCAACACTTGATTCTGAGCTATACCTTTCTCCTTTGCTGAATAATGGAGCTGGCAGTTCATCACTTTGCTATAACTATGGGATTCAGAATCAGAATAAGGTTGAGTTGCAGCTTGGAGTTCAAGATTGTTCGGAAGGAAAGAGAGAAATGGATTTGTTAGAGTTGGTTTGTTCTCCTCAGTTTTTCCACTAG

Protein:

Promoter(3k):

>AM03G026580.1
CTTCTTTTTTTAAAAAAATATTTTAATATTTTTTATTTTATTTTTTGAAAAAGTAGTTTCATTTTATTTTATTTTTTTTAGATAAGCAATACTTCATTGATAAAGCGCACTAGGGGTGCTCGAACCCAAACAACAAAAGTTACCTATTGTTTAGGCAATGGAGTGGATCAAGCCACCAAGCAGAAATATTAAAATTTAAATTACAATGAGATGTATAAACCAACCAACTCCAAGTTAACTGCTTGATGCGAGAAAAATCAGAGTCAATATGTTGGGATCCTCGGTCTTGAAGATAAGAGCATTCCTAGCTAACCAAATGCTCCAACAAGTGGTCAACCAAATTAAGTACTTTTTTTGCTTAGCCTTTTTACCTTTAGACAGCTTCCCCCACCAAAGACAAAGATCGATCAAGCTGTTGAACCCCACGTGATCGATCCTAAGCCAAGCAGAAACCCGCGACCAAATATCCGATGCAAAAGTGCAGTTCAAAAAAGGTGAAGCTGCGATTCAGCTTCGTTCCAACACAGAGGACAAAGAGCATCAGCATCCGATGCGATAACAAGCCGGTGTCATTTTATTTCATTAATTTATTACTAACATATTTTATTTCATTAATTTATTACTAACATATTTTTTATTTATGATTGTCATTTGAGCTACCCATGAGTTATATCTATTTTTTTCTTACTATTTTCTTCATTTTAAATTTTTTTATCTTTATAGCGAGTGCCAAAATAGTTAATTCTGATTTGCATTTCTTATGTTTATTTTTCGCGAGTACCCCCCCGTTTTTGTTTCTTTAATGAGTACTTTCGCTTACCCCTTTTTTTATGACTCTTATTTTGGTCATTTCGCATCAAGAAGTACTAGAAGCATACTTATATAAGTGTTTATATTAGTCACCAATGACATGGTAACAAAAAATATTAGTGTTTATATTTTTATATTAGTCTCGCTTTTAGTATTTGATTATAAATAGTGTTTAATGAATATATAGAAGATGAAAAACATTCTTAAATCCAGTCTTACCGGTACACATGAACAATAGAAATTTCGTGGCTTCTCTCGTTCATAATTTGTTTAAAAATCTAATTGACATTAACCCATGCAACTCACCCTTTTACTAATTTCACCACTTTAAAAAATCAATTTATTTTTACACTTTTTCTCTTTATATTTTTTAGACCTATATTTTTTACAATCTTTAAAAAAAATAATATATTTTGTTTCTTTGATGAGTACTCATGCCAACACCCCCTTTTCTATGACTCTTATTTTGATAATTTCGCACTAATATTTATTAGAAGCATATTTAAATCAGTGTTTATATTTATATTTTAGTCTCGCTTTTTAGTATTTGATTGTAAATATTTGCACATATGAACAATAGAAATTTTGTGTCGACTTCTCTTTTATGATCTGTTTAAAAATCTAATTAACATTGATGTGTGCAACGCACACTCTTACTAATTTCACCAATTGTTGTTAACTTCAACGATCAGATTGAAATTTCCATTGATGAAGATAAGAGTGATAGATGTTGAAGAAGTATATGATTTTGATCAAATTATGTTTTAAGTTTTTATATTTACATTTTATGAATATAAGTTATGTTATTAAAACTCTTTACGCTTTTTCTTCTTAATATCCATAGATGTTGAATATCAATGTCTTGGTTAATGTTCCTTTTTAATTTCATAATATTCTTAGTTAGTTTATAGTTATAATTTAATTTGTACTCATTGTTATTAGACTATATATTTTACAAAAATCAAATTTAGCCGACTCCGTGCATCGCACGGGTATTAGGGCTAGTTTTTTTTTCAAAACAACATGAAAACATCGATTTTGATAATTATAAAATTTCTGAAAAATATTGAATTACCTTTGCATACTATCAATTTCTTTCTGGACAGCTTTATTTTAAGTATAATATTTTTTATCATGTATTTAAAATTTAACATAATATATAATTAATTGGATGATCTTTTAAATTGGCGTAATTCTTGTTTGATTCAGACCAATGATGGCTACCTACAAAGTGTTCCAACGCTTTTGAAAGACTATAATCTCTGTTCATACTTATGATCAAATTTCGCACCAGCCAATACCGAGTTTGTCAATTGCAGGAATCGAACTCGAGAGTACCGGATTGACCCCGGCCCGTGTCCCAGGGTGGCTTTTGCTATTCAGCCAACAGTATTGGTTAAATTGGGATAATTCTTTAATGAAATAATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATGTGTGTGTAATTATTTTTTTAAAGTCGAGAAGTATATTTTTTTATGCAAAAAGTATAGTTTTTTATAAGCAAATTAAGAGGAGGACAACTGATCAAAAAATTAAGAGAAGGACATTTGAATTTATCTCATCTTGCAATATTCTTGCAATCTTGAACCATATTTTTTTTTGGTACAAAGCATAGAAAAAAAACAAAAAAGAATCTTGAACCATATATATGTATGTTTAAAACTATTTAAATCGTTGAATGATTTTAAATATATTATAATGACTCACAATGGAAAATTAAATCAAATTTATGTCAATATTGTCATTCATTCGCCCATTAAGAATGTTAAACCAATATTTCAATATCCATGATAAAAAATATTTAACAAAAAATCAAAAGGAACTAAGAAATAAACTATATTATTAATTTATTAAATGAAATACAAAACATTGGGATTAATAGCACCCACTGATTCCTCCCAGCTCTCTAAATTTTGTCAAACAAGAATTCCAGGAGTTACAATTTACATCATTTCTATCCGTTGGATTTTATGAATAATCAATGGCTACTAAACCATGTATCCAATTACAAGGGCTTGTAATAAGCTTGTTCTCTCCATATTTACACCTCACAACTTTTGATTTCACTCTCCATCATCATCAAGCAATTTTCATGAAAACAATTGTAGCACTTGGAAGTTGTGTTAGTGGTGATACT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	110	156	4.20E-32
PF00249.34	Myb_DNA-binding	163	204	4.20E-32
PF13921.9	Myb_DNA-bind_6	113	170	9.80E-26
PF13921.9	Myb_DNA-bind_6	165	206	9.80E-26

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A896WCP6	_

SwissProt

SwissProt term	Description
MY119_ARATH	Transcription factor MYB119

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G58850	myb domain protein 119
Medicago sativa L.	MsG0580028022.01.T01	_
Oryza sativa L.	LOC_Os06g06740.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa005208	_
Glycyrrhiza uralensis Fisch.	Glyur000986s00028867.1	_
Codonopsis lanceolata	Cl_C15344_unscaffolded_00010T	_
Arachis hypogaea L.	AH11G04010.1	myb-like protein A like

Expression pattern