Gene detail

Detail information of Am03G025730.1 Annotation

Gene ID	Annotation
Am03G025730.1	ubiquitin activating enzyme 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G025730.1	mRNA	Chr03	84785311	84791811	+

Sequences

CDS:

>Am03G025730.1
ATGGAAGATTTGAATGATGGGAAGCCTAGGAAAATTAAAAATGTTATGGGTTGTATGTTTGAAGTGGAAGAAGATACCACAGATTATGGTATCTATGAAGAAGGCGGTATTGTTACACAAGTCCAACAACCAAAGGTATTGAACTTTAAGCCACTGAGGGATGCACTCAGTGATCCGGGGGACTTTCTGCTGAGTGATTTTTCGAAGTTTGATCGCCCAATTCTCCATCACCTTGCATTCCAGGCTTTGGATCAGTTCATTTCTTTGCTCGGTCGCTTCCCGGTTGCTGGAGTCGAGACTGATGCTTTGATGTTTATGAACTCTGTCAAAATGGTCAATTGTAAATTGAAAGTAAGCCCAAGTTTTATAGATGAAATATTTTTACGAGACTTTGCCTTTGGGGCAAGAGCAATTCTTAACCCCATGGCTGCCATGTTTGGTGGAATTGTGGGACAAGAGGTTGTCAAAGCATGTACTCAGAAGTTTAATCCACTTTTTCAATTTTTCTACTTTGACTCTGTGGAATCTCTTCCTTCAAAACCTCCACGTGATGTCAGACCAGTAAATAGTCGTTATGATGCACAAATTTCCATTTTTGGACGGGATTTTCAAACGCAATTAGAGGACTTTCAAGTGTTTGTGATGGGGTCTGGTGCTCTGGGATGTGAACTTCTAAAAACTCTTGCCCTTATGGGAGTGTCTTGTGGAAACCAGGGAAGACTAACAATTACTGATCATGGTATAATAAAGGCTAGTAATCTAAGCAAGCAGTTTCTCTTCCGTGAATGGAACACTGGACAGGCTAAGTCCACCATTGCTGCTTCGGCTGCCACCTCTATAAACAATAGCTTTAGAGTTAAAGCACTTCAAAATCGAGTGGAAGATGAAGTCTTGTTTAATGAGATTTTTTGGGCAAAACAGAATGTAGTAATAAGTGCTTTAAATAATGTGAATATAAGATTATATGTTGATCAGAGATGCTTCTATTTCCAGAAGCCTCTTCTTGATTCCATAACCCATGAAACCCAGTGTGACATGAGAATAGTCATTCCCCATCTGACTGAAAACTATGGTGCATCTAGAGATCCACCTGAGAAATAG

Protein:

Promoter(3k):

>AM03G025730.1
GAAGTTGAACGAAAAATCATTCTCGTCAGCGATTCCATCCTTCTTCGTCCCTTCTCACCGAAGTTCCAATCGGTACGTTGCTTCTCTCTTCTTCATTCTCATTCATTCTCCTTCATTCTCTTGTTAATGTTAACTTGCTTCGCTGTTTTGTACTGGTTTCTTAATCATGCTAATGGAGTTAGGGTTAGGGTTAGTGTTTATCCTAGTCCTCTTTCAGTTATTCTTTGCATTTCTTGGTTATGAGTTCGATTATCTTCGCGATCGCGGCGTTAATTGTTGGTTCTTGATTGCATTTCTTGTTATTGTTAATTGTTCTTGTTGTATTGACGATGGAATTTCGTTTCGTGTTTGTTGTTCAGCAGCTTATTGCACTATATGCTTCCAAGAAAGAGACATTGCGAAGGAGTGATTGTAGAAGAAGATACAGATAATAAGAGTTTTCCCAACAAGAACAGGATGGTCTCCGCCGGAGCCTCCAATTCCAACGTGAACAGTGACCAAAGATTCAGTACTAGCGAGAGGCAATGCAGAAGCTCTTTGCGGCTAGCGTTCTCATATCTGGGATGGAGGGGCTTGGCGTTGAAATCGGTATAGTCTCTCATTATGTATCTTTTCTTGGTTGCTTTTTCGGTATAATCAATAGATTTTATAGTACCCAATGAATCTTGAACCATTCTATTAATGGTTGTGATATTTAGGTTCATTTTTGAAATAGTGTGAGCTCTCTGATATGTGTCATTTTTTTTTCTTTTGTGTATTCTGATGAAGTTTACTACCTGCAGCCAAAAATGTCATTCTTTCTGGTGTTAAATCCGTGACCTTGCACGATGAGGGAGATGTCGAGCTTTGGGGTTTGTCTGCGGCTTTTGTATTTTCAGCAACTGAGATAGGTAGAAACAGAGCAGACGCTTCTGTTTCTAAATTGCAAGAACTCAACCATGCAGTGGTTGTGCGGAGCTTAAAAACTCGGCTGACAAGAGGATCTTTCTAATTTCGAAGTACTCTCCTGCTTTCTTCTCTTTATGCGTGTGTTTGTTAGTTATTTCTGAATATAATAATTTTCTTAAATTAACCAAAAAAACTGCTGCAAGTGATGTTACTTCAAATAGTGATTATTGTTATTTAGAAACTTTGTTTTAGAATTTTTCCTTAGCTAATAAAAACATACATAGACATCACCAGTGTTGTCAAATGGCGGTTATGGCGGCGCCATGGCGGAATGGCGTGGCGGAATTTGAGCACGCCGCCATACAAAAACGGAAATATGGCGGAATGCCAATGGCGGCGCCATGGCGGGCGTTATGTGTATGGCGGTTGTGGCGGCGTGGCGGAAAATGGCGGACAAAACGGGAAAAATTACAAAAAAATTGGGTTTTGGTCATGTAACCCGACCCGAAATTAACCCAAAGGGTTAAAAAAGCAAAACTCTAATTCTGAAATACTCTCTCCCTCTAACGGTTACTTCCTTCTAAAATCTTACAACATTGCACACTTCTCTCTCCCTCCCTTTGCTGCTTCTTCTCCTTCCCTTCGTTGCTTCTTCTCTCTCCACCAGCAGGAACCCTATCAACCACCAGCAGCGAAGGTCGCGACCACCAGCACTCCAGCAGCAACCTCGCAGCCCTTTCTTCTCTTTTCGCCGGTTCCACCTCTGTTTCTTACACTGTGTTCTGTTTTAGTCTCTTTTCTTTTTCTTATCTTGTTGTGTTCTTGTTTTTATATTGTTAGTCTTCTTTCTTAGTCTTTTATATTGCATCTGTTTTCTATTGTTGGTCTTCTTTCTTTTTTTTCTCTGTTCTTAATCTTAGTCTTATTTTTTTGAGACTCTGTTCTTGTTTTAATTATTTTCTTTTATATTGTATCTGTTTTTTTTCTTTCTTAGTCTTTTATATTGCATCTGTTTTATATTGTTGGTCTCTTTCTTAGTCTTAATCTGTTTTCATTTTTTTTCTTTGTTCTTAATCTTAGTCCTATTCTGTTTGTGCTATTTTTTTTTAAATAAATTGCTATGTTTCATTTTGTTGTTATTTTGATGTCTTAAACTTAATTCGAAGTGGTTCTTGGTTGTTTATGACAATTTGATAGAGACTAACGATATTTTGTACCAATTAAGTCTATGATTTTTGACATTTATTAATAGGCTTTTGGATTATTTTTTGTTTTTTTGTATGTATATTAGTGTGTATATATATATATATATGTTTAATTTTAAAAAAAAATTGGTCCGCCATGACGTCCGCCATATGCCGTTACGCCATCCGCCATATGTTTATGGCGGATTTTTGGCTCGCCGCCATAGACCGCCATCCGCCATTAACAACACTGGACATCACACACCTTTCTTTGATATCCATTTCTTGCTGTTTACATAAATTTTATAATTCTGAAGTAATATTGTTCATGTTTATTGTATAATAATGGTGTGATTCGCTAATTTGATGCGAAGGTTTCTTATTTCAGCTGTCTATGCTTATGTTTGGATTTATTTGAGCATATTTAAATAAAAATGCCTTATGAAGAATTTATTTTTTAGCTCCTTTTCAGAAAGTCCTTAATGTGATTTGTATAATTATGAACTAATAAATCAGTAAGATTGTTCATTTATATTGGTGAAATTTAATGTGGGGTTTCCTTATTTCCAACCATCAATACTTTTATATATGGTTTATTTAAATTTAAATATATTTTGGTATTTACAATTTTATTTATTTGTTATTTTAGGCTGTTGTTTTTACTAATACCAATATTGAGAAAGCTATTGAGTTCGATGATTACTGCCACAATCATAAGCCTCCTATTGCTTTTATTAAAGCTGAAGTTAGAGGCCTTTTTGGTTCATTCTTCTGTGATTTTGGGCCAGAATTCAGTGTTTCTGATGGAGAGGAACCCCATACTGGCATAATTTCATCTATTAGCAACTTTAACCCTGCTAGAGTTTACTGTGATGATAAACTTGACTTTCAAGAGGGAGATTTTGTTATCTTATCTGAAGTTAATGGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00899.24	ThiF	192	350	9.70E-47
PF16191.8	E1_4HB	43	112	6.10E-18
PF16190.8	E1_FCCH	1	41	2.00E-08

Gene family

Gene family	Subfamily
Ubiquitin Family	ThiF

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0005737	cytoplasm	Cellular Component
GO:0006511	ubiquitin-dependent protein catabolic process	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0006974	DNA damage response	Biological Process

InterPro

InterPro term	Description
IPR032420	Ubiquitin-activating enzyme E1, four-helix bundle
IPR042302	Ubiquitin-activating enzyme E1, FCCH domain superfamily
IPR032418	Ubiquitin-activating enzyme E1, FCCH domain
IPR035985	Ubiquitin-activating enzyme
IPR000594	THIF-type NAD/FAD binding fold
IPR045886	ThiF/MoeB/HesA family

trEMBL

trEMBL term	Description
A0A394DJ19	_

SwissProt

SwissProt term	Description
UBE12_ARATH	Ubiquitin-activating enzyme E1 2

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G06460	ubiquitin activating enzyme 2
Medicago sativa L.	MsG0580028472.01.T01	_
Oryza sativa L.	LOC_Os11g01510.2	ubiquitin-activating enzyme, putative, expressed
Cucumis sativus L.	Csa011643	_
Glycyrrhiza uralensis Fisch.	Glyur003567s00041497.1	_
Codonopsis lanceolata	Cl_chr06_30560T	_
Arachis hypogaea L.	AH11G03580.2	Ubiquitin-activating enzyme E1 2 like

Expression pattern