Gene detail

Detail information of Am03G024780.1 Annotation

Gene ID	Annotation
Am03G024780.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G024780.1	mRNA	Chr03	79873758	79878349	+

Sequences

CDS:

>Am03G024780.1
ATGCTCTCCCATGTTTCTTTTCAGGAAAATATGAAGGCCAGCAAAGTTGACTCTGAATTGAATTGTCTATATCCGATTCCTCACAACAAACTACCCTCCATGAAGTTCTATTTTACTTCAGTGGCCTCTTTCCTTTTTGCCATAATTATTCTTTTCCCTCTGGCTACGGCTGACCTTAGTTCAGATAGGCAAGCCCTTCTTGATTTTGCTAATGCTGTGCCCCACCGTCGAAACCTGATGTGGAATCCATCCACCTCAATCTGCACATCTTGGGTAGGCATCACTTGCAATCAAAATGGAACTCGAGTTGTTAATGTCCGGCTCCCCGGAGTTGGACTAGTGGGCTCCATCCCATCTAACACACTTGGAAAGCTTGATGCCGTGAAAACTATTAGCCTTCGCTCCAACCTACTTAAAGGAAATCTTCCTGCTGACATTGCTTCTCTCCCTTCTATTCAGTATCTCTACCTCCAGCATAATAACCTTTCTGGTGATATACCTACCTCATTGTCACCACAACTAGTTGTACTTGATTTGTCATATAACTCCTTCACTGGTAGCATTCCAAAGACCTTACATAATTTGACAGAATTAACTAGTTTGAATCTCCAGAACAACTCCCTATCTGGACAGATACCTAATATTGCTGTTACTGTACTCAGGAATTTGAATTTAAGCTACAACAATTTGAGTGGACCTATCCCTGCAGCTCTTCGTATTTATCCTAATTCGTCTTTTGAAGGAAACTCTCTTTTATGTGGGCCACCTCTAACACCGTGCTCTGGAATTCCCCCTACACCTCCTCCTGCATTGACTCCTGCTCCATCATCAGCTCCTACACAAAGCTCCAAAAATAAATTGAGTAAGGTAGCTATCATTGCCATTGCGGTTGGAGGAGCTGTGATGCTATTTTTTGTAATTCTTGTTATTGTTCTTTGCTGTTCAAAGAAGAAAGATGATAGAGACTCCAATGTAATTAAAGGGAAGGGTCCTAGTGCCGGCGGTAGGGGTGAGAAGCCAAAAGAAGAATTTGGGAGTGGAGTGCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTCGAGGGAAGTTCTTATAATTTTGATCTCGAAGACTTGCTAAGAGCTTCAGCTGAAGTTCTGGGAAAAGGTAGTTATGGTACTTCATATAAGGCTATATTGGAGGAGTCAATGACAGTAGTGGTGAAAAGATTGAAAGAAGTTGTTGTAGGCAAGAAGGAGTTTGAACAACAGATGGAGATTGTGGGAAGGGTTGGACAACATGCAAACGTCGTGCCACTTCGTGCTTACTATTATTCGAAAGATGAGAAGCTTTTGGTTTATGACTATGTCCCAGCTGGCAACCTATCCACACTCCTGCATGGAAGCCGATCAGGTGGAAGAACTCCATTAGATTGGGACTCCCGAGTAAAAATATCTCTCGGAACTGCCAGAGGAATTGCTCATATCCATTCTGTTGGTGGTCTCAAATTCACACATGGAAATATCAAGTCCTCAAATGTCCTCCTAAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTACCACCGCTTATGAACGTTCCTTCAATCCCTTCTAGAGCAGCAGGTTATCGTGCTCCCGAGGTGATTGAAACTCGTAAACACTCTCATAAATCAGATGTATACAGCTTCGGTGTACTCCTTCTAGAGATGCTTACCGGGAAGGCGCCTCTCCAATCTCCAGGACGCGAAGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTAGGGAGGAGTGGACAGCTGAGGTTTTTGATGTGGAGCTAATGAAGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCTTGTGTAGCAAAGATGCCTGATATGAGACCTAGCATGGATGAAGTGGTGAGAATGATCGAAGAGATCCGGCTATCTGACTCAGAGAACCGACCATCTTCCGAAGAGAATAAGTCTAAGGACTTAAATGTTCTAACTCCATAG

Protein:

Promoter(3k):

>AM03G024780.1
TGATACTGATTTGAGGCCACACAACGTGGTACTCACAAATTATGAAGGCAAAACTGGCCACTCACTTGGGGCCATTGAAGTCGAGTTAGCTGTGGGTAGCATCAAAAGATCAATGTTGTTTCTGGTAGTTCCTTCTAAGGCTAACTACAACTTGTTGCTAGGAAGAGAGTGGACACATGGCGTGGGGGAAATACCATCAACTGTTCACCAAAGGCTCATTATTTGGAGAGAAGATGGTTTGGTCAAAAACATTGAAGGCGATCAGAGTTACTTCAAAGCGGAGGTAAATACTATCACTAAGAAAACTTTCGACAAACAATTGGCGAACATTGCGCCATGTTCCTCTTCTGATCATGGTTATGTACACCAAGATAATGTGTTTTCCTCAGTTACTCTTCACCCAAACTATGGATTTATTTGGGAGAGGGAGGTTATGGATGAGGATAATAACCCAAGAGGCTTTTGCAAGCCTACTGGGTGGGATGGACCATAAATAGTTTATTTATGTCTAAGCCCAATGCATGAGATAGAGTTACAGCCTATGTGGCCGAAAACAAAGAAAAAGCGGCTTTGGAAGCCGAGTTACAACAACAAAGGGTTGCTGAAGCCAGTGACAGTAATAGTAAGGAAGACTTGGTCGAAGACCAAAGGCTTGATTGTGTATATGATGACGAGCCTTTAGGTTTTGAAAAGGACCCAATGGGTTCGACCAAGAAAATACAAGCACGAGATCCCTTGGAAGAAATTGACTTGGGAGATGGCTCTGTAAAAAGGCCAACATATATTAGTGAAAAGATTGACAAAGCTTTCAGGGTGCAATCTGTCGAACTTTTGAAGGAATTTAAAGACTGTTTTGCTTGGGACTACAATGAGATGCCAGGTTTGAGTCGAGAAGTAGTGGAATTGAAGCTGCCTATACGACCAGAAAAGAAGCCAGTGAAGCAGACACCAAGAAGATTTGCACCACAAATCCTGTCGAAGATCAAAGCAGAAATCGAAAGACTACTCAAGAGCAAGTTCATCAGAACTGCTAGGAATAGAGGTCGCGTAGTGTTGGATGAAGAAATGAAGCTTCGCAAATGGAGTTCTCTGGTGCGTAAACACTGGATTTCACAAGGAAGAAGAAGAGAAAGGGTTCGCAGAAGCAGAGAGAGAGTAAAAAAGGGAAAATGAAATGGAGAAGTTGCTTTTATAGCTGTTTTAGCAAGAGAGAGAAAAGGTAAACCTTTGGGTTTTCTTTAAAGAGCAGTTATTTGCAATAAGTAGTGGGGGAGTTACAACACAAAACGTGGCCCACTAAATCTGAGATAACGGCGCCATAAAGTGCCTTTATTGGAAGTGTCTTTTCAATTTTGAAAACTGATGGTAGTGACGTCATAAGATTCGACATAAAGATGTTGATTGTAATTTCAAAAACGTCATTTTCTGCCTTCATTTAAAACTCAGTCGAAAAAGACATTTTTGTGGGGCAATTTGTTAGCCTGCATTTTCGAGAGACTCAATTAAATGCAGTCAACGAGGTTTGACTTGCTAATTTCAAGAGGAAATGTGTTGATTTCGACAGTGAGAAGTTTTCCCAAGAAGGTTCGACGCAGTGCTTAATTTAGTGGGAACTGTACATTTGTGAGAACTTTAACACAAATGTTCTAGGATTTTCTAATTGATCCTGCAAGCAACATTAATTTGTAACTAGCTAGCGATGTTTACCAAAAAACACGGTAAAAGGAAGCTAAGTAGCAGAAGCACAAAGAAGCTTTCAAAAGCAAAATATACTGCAATAGTTTTGGGTGACATGCTCCCACATATGAAAGAAGTTTTGCTTGGCCATGAGCTTTAAGGCTTAAGTCAATTGGCAACCAAAGCTTCCATGATTGAGCACTTCATTCATAAGAAGAAGCAAGAAGGATTTGGCAGTGAAATAGTCCCCATGGATGATTATGATCTGTTTGAAGATGCATCTGATTATCACCGTGATTAGGCAGCTAAATTACATGACAGCCGAGACCACGCTGATTGACAAGGGTGTAGCTTATGTAAGTTTGTTAGGGTGTGTTTGGGAGTTTGAAGGGGAGGGAAGGGGAAGACATAGGACTAATAGTGTAAATTCTTTAATGATGAAAAGCAGTGGTGGACCTAGCATGCAACCAGGGGGTTCAACTGGAATTTTTTTTTTGCACTAAACACCCTATATAAATAGTCTAAATCTCCTGAAATTTTAATTTTGACCCCCCTGAAAATTTTAAATTGTATTAGTAGACCAAGTTTTGCACCCCTGACCCCGGGGTCCTGGGTCCGCCACTGATGAAAAGAAAAGTTATCCCCTAAACCCCCCAACCCCTCTCCTAATTTATTTTTGGAGCTCGTTATTTAAGTCTTATTTATTCGTAGTTTATTTTTTATTTTATATTTTTCATAGTAGATTTTTTAATGATAAAGAGCCTCTATAAAAGTCATGAAAATCATCATTATGTGCGTTGTCCTATTTCCTCTCACACTACTCACTACATTCACATCCAATAAAAAAGTCTCATCTTTCAGTTACCAAAATTAAATATTAATATTAAATGAATTAAAGAAACAACGAAGAAGAAGTCTGAAACTTTTTTTCTTTCTCTGTGAGTCCAGCGTAGGTCAACAAAGAGGTTGAGTTGGGGTTACTGTCAATTCTGCATTGCTTTGCTGTCTCCTCACTTTTTTTTATTTCCTCTTTCTTTATTTCAAAAATCAAGTCACTTTCTTATGAATCTTATCAAAATCTGATTAATTTAAAAAACAATTTTATGTGTGTGTATGTTGTTTTTTAATTCCTTCCTTTCTTCAGTTGTTGTATTTTAGCTGCTCTTGGTTAAAATGCTCCTGAGTTTGAGGCAAATTCTCTGGCTTTATGAGCTGTTATTATTGGTGCCATGCTGAAACCCACTTTCAGATTATGAATGCTTAGCAACTCTCATTTCTGCTTCAGCAACTTCTACTTCATTGATTTTTCAGCTCTGAATTCTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	376	639	4.30E-37
PF07714.20	PK_Tyr_Ser-Thr	377	640	5.70E-35
PF13855.9	LRR_8	116	162	1.30E-14
PF08263.15	LRRNT_2	60	97	5.40E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.3:RLK-Pelle_LRR-III

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0032440	2-alkenal reductase [NAD(P)+] activity	Molecular Function
GO:0004888	transmembrane signaling receptor activity	Molecular Function

InterPro

InterPro term	Description
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
I1LLZ1	_

SwissProt

SwissProt term	Description
Y5830_ARATH	Probable inactive receptor kinase At5g58300

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G58300	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0580028614.01.T01	_
Oryza sativa L.	LOC_Os01g60330.1	inactive receptor kinase At2g26730 precursor, putative, expressed
Cucumis sativus L.	Csa007654	_
Glycyrrhiza uralensis Fisch.	Glyur000647s00023066.2	_
Codonopsis lanceolata	Cl_chr06_31450T	_
Arachis hypogaea L.	AH01G06320.2	Probable inactive receptor kinase At5g58300 like

Expression pattern