Gene detail

Detail information of Am03G024420.1 Annotation

Gene ID	Annotation
Am03G024420.1	auxin response factor 8

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G024420.1	mRNA	Chr03	78504929	78513996	+

Sequences

CDS:

>Am03G024420.1
ATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACATGAAGGAGGGGAGAAGAAGTGTCTGAATTCTGAGCTGTGGCATGCATGTGCGGGGCCCCTTGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTATCTGCCACGACTAATAGAGAGATTGACGGGCACATACCAAATTACCCTAGCTTGCCACCTCAGTTGATTTGCCAACTTCACAATGTCACTATGCATGCAGATGTTGAAACAGATGAAGTATATGCTCAAATGACACTTCAGCCATTGACCCCGGAAGAGCAGAAGGATACATTTCTTCCTATGGAATTGGGCATTCCAAGTAAGCAGCCCTCGAATTACTTCTGCAAGACTTTAACAGCCAGTGACACCAGCACGCATGGAGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCACAGCAACCACCGGCACAAGAGCTAATTGCTAGGGATCTCCATGATGTCGAATGGAAGTTTCGACATATTTTTCGCGGACAGCCAAAACGGCACCTTCTTACGACAGGCTGGAGCATATTTGTTAGTGCCAAGAGACTCGTAGCTGGAGATTCTGTGCTTTTCATATGGAATGAGAAGAATCAGCTTCTTTTGGGAATACGTCGAGCCAGTCGGCCACAAACTGTAATGCCATCGTCAGTTCTTTCCAGTGATAGTATGCACATCGGACTTCTTGCAGCTGCTGCCCATGCTGCTGCAACCAATAGCTGTTTTACTGTGTTCTATAATCCAAGGGCTAGTCCATCTGAGTTCGTCATACCACTTTCAAAATATATCAAAGCTGTATATCATACACGCATTTCTGTTGGTATGCGCTTCAGGATGCTGTTTGAGACTGAAGAGTCAAGTGTCCGCAGGTACATGGGTACAATTACTGGCATAAGTGATCTGGATAGTGTCCGGTGGCCGAATTCTCATTGGCGCTCTGTCAAGGTTGGTTGGGATGAATCAACAGCAGGAGAGAGGCAGCCACGAGTGTCATTATGGGAAATTGAGCCTTTAACAACATTCCCAATGTATCCGTCGTTATTTCCCCTCCGATTGAAACGTCCATGGCATCCCGGCTCCTCATCTTTGCATGATGGCAGAGATGATGCAGCTAATGGACTGATGTGGCTGAGAGGTGGAGCTGCAGACCAAGGTCTCAATTCCCTAAATTTTCAAGGTGGTGGTTTGTTGCCCTGGATGCAGCAGAGACTAGATCCGACTTTACTCGGAAATGATCAGAATCAACAATACCAAGCCATGTTGGCAGCAGGATTGCAAAATGTTGGCGGTGGATATCTCATGAGGCCACAAATGATGAATTTTCAACAGCCTATTCAATATCTTCAATCAGGGAACAATAATTCACCTTTGCAACTTCAGCAACAGCAAGCAATTCAACAATCTGGGTCATCTAATATACTGCAGCCACAAGCTCAAGTACTTACAGAGAACCTGTCGCAGCACCTCCTTCAGAAACCAAATAACAACCAAGAAGTCCAAGCTCAACAGCAGCAGCAGCATACTTATCAAGATGCACTTCGAATTCAAAATGATCAGCTCCATCAGCGACAACAACACTCCAATGTGCCTTCACCATCGTATTCGAAACCGGATTTCTTGGATTCAAATATCAAGTTTGCTGCTTCAGTTTCCCCCGGACAAAACTTGCTTAGTTCACTTTGTTCCGAAGGAAGTGGCAATCTCTTGAATCTCTCCGGAAGGGGTCAGTCTTTGCTGACTGAACAGTTACCCCAACAACCATGGACTCCAAAGTATGCAAATATGCAGGTCAATGCATTTGGCAGCACAATGTCACATGCACAGTATTCTGGAAAAGATTCAGCGATGGTAGTTCCACATTGCGATTCGGATGCCCAAAATCCTACTCTCTCGGGTGTCAATATCGATTCATCTGGCCTTCTACTCCCGACAACCGTCCCTGGTTACACCACTTCATCAGCTGATACTGATGCATCAACAATGCCATTAGGGGAGTCTGGATTTCAGGGTTCTTTGTATGCCTGCATGCAAGATTCATCTTCGTTTTTGCAGAATGCAGGACAACTTGACCCACAAAACCAGACTCGAACATTTGTGAAGGTTTACAAATCGGGGTCGGTAGGGCGCTCACTCGACATCTCTCGATTCAGCAGTTATCGTGAGCTTCGAGAGGAGTTGGCTCGGATGTTTGGAATTGAGGGAAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTGTTCGTCGACAGGGAGAATGACGTACTTCTCCTTGGCGATGATCCGTGGGAATCATTCGTGAATAATGTTTGGTATATAAAAATACTTTCACCTGAAGATATTCAGAAAATGGGAGAAGAAGCGGTAGAATCGCTTGCTCTAGGTTCAGGACAAAGGCTAAATGGCGCTGGTGCAGAGTCGCACCACATTGTTTCTGGACAACCATCAATTGGCTCACTTGAATACTGA

Protein:

Promoter(3k):

>AM03G024420.1
ATACCCCAAAACACACTGCTTAGCATTGCACTTTATGTATTTTATTACAAAATTATTATTTTCTTTCAACAAACAGGTTATTGAGGAACAAACTTTGCGTATTTGAGCAGTTCAAATTTTTGCGAACCCTAAAGTACCCGAAACCACACTGCTTAAAACTTGAAAAAGGAAACAAATTTTAAAGTACCTCAAAACACACTGTTTAGTGTCGCACTTTACATATTTTGCCACAAAATTAATTTTTAGATTGAGGAATGAACTTCATGTGTTTGTACATCTATTTTTTTTTAAATTCTAAAGTACCCCAAAACACACTGTTTAGCGTCACACTTTACATATTTTGTTACAAAATCAATTATTTTTAACGAAATTCGTTATCGAGGAACAAACTTGCGTATTTGAACAGTTACTTTTTTTTTCAGACTCTAAAGTACCCCAAAACACACTGGTTAGCATCACACTTTACGTAATTTATCACGAAATTAATTTTTATCTTCATTGGCTTATAGATCTAATTTTTTTTCTAAATAAAAATAGGCTTAAATATCACTTACCCCCTGCAAATATCACCATAATCCATTTACCCCCCTGCAAAAAAAAAAGTTTTAAAACAAACCCTGCAAAATGTAACTGTTTCCAGTTACCCCCCTGCTGTTAACTTTTCTGTTAAATATTAACTGTGATGACGTCAGCACTGACGTCAGTGCCACGTGTCACCGTATTATTGGGCATCTGTGACACGTGGCACTGACATGTCACGTCAGCATCCTATGTCACCAGTGCCACGTCAGCAACCAATGGATGGCTGCCACGTGGCACTAGTTATTACACTCAAAAATAAAGATTTGTTTGGCCAATGAGTGTGTTGAACTCATGACCACTTACTCACACCCATACCTCCTAACCACTGAGCCAAATTAGTATTTGTGATTATTAACTCACCTACAAATATATAGTACATCATTGCCAATTAAATTAAAAAAAATCTGGAAACCAGAAACTCAAGCTTCATCTTCTACGACTCGTAAAACAACAATCTTCAAAACTCATATCCATCTTCAACGAACCAAAACTCAGATCCGTCTTCAACGAACCAAATTGGCAATGAGTTTTGGAGGGAGGAGGGGTAGGGGGTGGGGGTAAGGGTGGTGGGGGCGGGTGGGGTGGGAGTTTTGGAGGGAAAGTAGAGTAGGAGACTCCCTAAAATTTATATTCTTAAGATTTCTTAAATTTATTCTGAAAAAAAAGGAAAAATATACAAAACAATGGGGGATATAAACCAAAAACCACGGAAAGAAAAATCAAGTAAATCTATATTGAGGTAGCCTAACACTATTCTTAGAGAAACCATCAAAAATAAATTTAGGAATAGTGTCGCACCAACTAAAAACTAGGTACCAAAACACCACATGAGGCTAACTTATCAACACGATGGTATCCTTAATTCACGAAAAATATTAGAAACAACAACTGCAACCTAGTAGTTATAGCTAAACAACCCATCCATCTAAGCTTGGTTTCCTTAATTCATGAACTGATGCTTAAAAATAAATTAAAACTTCAACGACAACTGATGTCTCCTCGATGAGTAGAAGCACACAATCCTCCATACCTAATGTTCGAGACAATGATTTAATCGTACGTGTCCAACAAGTTTCCTAGTTAGATTAATCACCGATAAAATTGATAAAAACTGCACACTTATAACACGATTACAAAATAGATGATCTATTCTTTTGGCACATACATCATAGAGGTTCAATTTAGCCTGCGGTAAAATGAAAATGAAAAACTAACTACAGTATCAACAAAAGAAAGATCTTTCATTAATTTGTTTATTTATGTGAACGATCCTCCATGCTTGGATTTGCAAATAGGAATGGAGCTATTGCCGAACCTTCAATCATGAATCAAATTAATCTCTTTGCTTTTAGCTTTTTCTTCATCACATCCCACTTGCATACCAGTAGCACGCGCCTACCCTCTCTATACCACTTTCTCTCTCCTACAGATATTTTATTTTTTTACTAGCAATAAATATTTTATTATTACTATTATTGTATTTATTGTAATAATTTTCTCACACCTTAATACTCCGTACTTCAGACAGTGACCGGTGAAGGATGGTGGCACATGCCTGCTGTCATATCAATCAAAGTAAACGGTCAAGAATTTCAGGTACGGATAATCCAACGGTTAAGATTGATTTCTTGTCCCATAACTCTCAACATAAGTTTTCTTTCTCTTAAATTTTCTCTCTCTACTGCTCCATGTCCAGGTTGGTCGGGGCCCCCCTTATATATGTAAAAAAAAAGACTCTCTTTTTATTTTCTCTCTCTTCTGTCTTCTCACTTTCTTTCTCTCTCTTCTGTCATCACTCACTGTGTGTGCGCTTGTGTGTGTGCTCAGCCAAAAATCCTCTCACTCGGTCTCAATCGATAGTGATAGGCCACAAAAGAGGGTCTTTTGTTTTGATTTTGATGATTTCGATTTCATAACACAACAACACTCAACTTCCATTTTCTCACTCTTCATGGCGATCTTGAACTACGTGCTACTCTTACAGGTTAACTTCAATTGGGTTTTGCTTCTTCTGGGTCATGAGGGTTTTGCTTGAAATTCTCAAAACAGAAGTAAAAAACAAAACTTTACTTCCTTGCTTCTTCTTGTGTTGTTATTATTGGAAGCTTGCGTGTAGGGTTAGTTGTTTTTGGGGTTTTTCTTACTGAAGTGTAGTAGTAGTAGTAGTAATAGTGTTGGGTTGTTCTAAATTTGTTTAGGATTTTAATTTTGTTTGATTTTTGAAGTTGGTGTTTTTGGTTATGTTATTTAGTGCATTGGTTAGGTAGAGGAAGGTATTGGTGAATGGGAATAGAATGGCTTGAAGCAAATTGAAGTTAGTGGTTTTAAGTTAGGGTTTCATGTTTTTATGTGATTGCCAAATTTATACTGTGTCTTTGAATGAAAGAGAAATAGAGGAAAAGGGTAAAGCTTGATGAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF06507.16	Auxin_resp	254	337	6.10E-35
PF02362.24	B3	128	229	9.70E-22
PF02309.19	AUX_IAA	714	802	1.00E-07

Gene family

Gene family	Subfamily
Transcription Factors Family	B3
Transcription Factors Family	B3-ARF

Gene Ontology

GO term	Description	Category
GO:0004497	monooxygenase activity	Molecular Function
GO:0005506	iron ion binding	Molecular Function
GO:0020037	heme binding	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR000270	PB1 domain
IPR015300	DNA-binding pseudobarrel domain superfamily
IPR003340	B3 DNA binding domain
IPR010525	Auxin response factor domain
IPR044835	Auxin response factor
IPR033389	AUX/IAA domain

trEMBL

trEMBL term	Description
A0AAN9JXW8	_

SwissProt

SwissProt term	Description
ARFH_ARATH	Auxin response factor 8

KEGG

KO	Description	Enzyme
K14486	auxin response factor

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G37020	auxin response factor 8
Medicago sativa L.	MsG0580028681.01.T01	_
Oryza sativa L.	LOC_Os04g57610.1	auxin response factor, putative, expressed
Cucumis sativus L.	Csa021954	_
Glycyrrhiza uralensis Fisch.	Glyur002288s00033072.1	_
Codonopsis lanceolata	Cl_chr01_42890T	_
Arachis hypogaea L.	AH07G11480.1	Auxin response factor 8 like

Expression pattern