Gene detail

Detail information of Am03G023700.1 Annotation

Gene ID	Annotation
Am03G023700.1	AGAMOUS-like 80

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G023700.1	mRNA	Chr03	73558157	73558870	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM03G023700.1
GATAAAATTTTTGGGATTTTTCAATTAGGCGGACAAAATTGGGGTATTACAATGCTGAGATTGACTCTATAGAAAGAAACAAAACATGGACCCTCATTGAGTTACCTAAGGGATCCAAGAGCATTGGGGTAAAGTGGATTTTCAAAACAAAGTATAATGAGGAGGGAAAGATAGAGAAGCACAAGGCTAGGTTGGTAGTCAAGGGCTATTCTCAAAAGCATGGGATTGATTACACTGAGGTATTTGCCCCAGTTGCTAGATGGGATACTATTAGAAGTCTGATTGGGTATGCAGCTACACAGAATTGGAAAGTCTTCCAATTGGATGTAAAGAGTGCTTTCTTTCATGGAGAGCTAACTGAGAAAGTGTTTGTTGATCAACCACTTGGATATGTTGAAAAAGGAAGTGAAGAAAAGGTCTATCTGCTTCACAAAGCCTTATATGGCTTAAAACAAGCCCCTAGAGCTTGGTATAGTAGAATTGAACACTACTTTGAACAAGCAAATTTTGTCAAGTGCCCTCATGAACACACATTGTTTACCAAAACAGATGCTGCTGGTGGAATATTGGTTGTCAGTGTATATGTAGATGACCTTATCTTTACTGGAAACAACCCTGAGATGTTTGAGGAATTCAAGTTGTCAATGAAGCAAGAATTTGATATGTTAGACTTGGGAAGAATGAAGTATTTTCTAGGGAGTAGAGGTACATCAAAGAGATGGAGGAACCTTCATATGCCAGCAGAAATATGCTAGAGAAGTGCTTGAGAGATTTGGTATGGAAGACAGTAAACCAGTGACTGTTCCCTTGGAGCCAGGAACCAAAATCAGTAAAGAAGGAGAGGGAAGACATATTGATGACACTGAGTATAAGAGAATGGTGGGTAGCTTGATGTATTTAACAGCAACTAGGCCTGATTTAGCCTTTGCTGTTAGTGTGATAAGCAGACTTATGGAGACACCAACTGAGCAACATCTTGTTGCTGCAAAGAGGATCATGAGATATGTGAAAGGAACTCTTGAGTATGGCATTTTCTATAAGACTGGACATAAACCAGATCTGGTAGCCTATTCTGATAGCGATTGTGCAGGTGATCATGATGATAGAAAGAGTACCTCAGGTCATGTATTTTTGCTGGGAACAGGAGCAGTTTCGTGGGCTTCAAAGAAGCAACCCGTAGTAACTCTGACCACTACAGAAGCGGAATACATAGCTGCTGCTATGTGTGCATGTCAAGGGATTTGGCTCACTAGAATTCTTCAAGTCTTTGGAGTCAAACAGCTTGGATGTGAATCAGTTTTGTGTGATAAGAGTTCAAGCGTTAAACTCTCCAAAAATCCTGTTCTACATGGTAGAACAAAACACATTGATGTTAGGTTCCACTTCTTAAGAAATCTGTGCAAAGATGGTGTGATTGAGTTGAAATACTGCCCTACACAGGAACAAGTAGCTGATGTGATGACTAAGCCCCTCAAGTTGGAAACATTTGCTAGGCTAAGGACTCAATTGGGAATGTGCTCACTTGCTGATGTAAAATGAATTCTGTACATAATTGCAGTTTAAGGGAAGATGTTAAAGTCTTAGCTTTTAATTTTGTCTTGTATTAGTTGTTAAATGAGGTATCAGCACTAATTAGAATTAGTGGCTATTAAAATGTAATTAGCTGTGTTTCTGTTAGCCTAATAACTACTTTCTGTTTGTTAGTTTGAGGCTTTGACTTTCAGTTGTAAATAACAGATACAAAAGGATCTGTTTCTCATTCAATGAAACACAATTCATTTTCACCATTTCTCAGTCTAAACACGAGACAGTCTCGATACCCAATCTAAAATATGATCCAAATGAAAACAACGATAACTAATCATATATCATATATAAAACAAAATTGAAGGTTCTTTCTTTCATTTCAAAAACTTGAGAGCAAACTACGAAGATTAATTCTAAATTACTGCGTGAAATTGTTCATGCCTCCTTTGCCTCTCCCTATCCAAATCTGATGCTTTAACAATTATATCATTAGAATCGTCCCACATAGAATCATTGAGCGTGCCATGATCACAATTGAAGGTCTGGTTATAGTTTGAAGAAGGTTGCCGCCTCAGCCATGAGAGGGAGAGAAGTAGCGTGAGCAGGGGGAGGAAGAGAGGAACGCTAAAGGAAGAACCGATTACTTTGACAGGAAGCGCAGGTTCTGTACTTGTTATTGTGAGGATGCTGGTTTTTGTTTTGCTCACAGGAGTACTCCTCTTTCAATCTTTTTTCCACTTGGTTTTGGCCCTTAAAGATTTTAACGAGGTTCCCCCATGTACCTTTTGTGGAGTACTCGTCATCAATAAAATTACTTTGCTTATAAAAAAAGCCAGACTTTTTTAAAAAAACTAATCAAATAAAGGGGTGAAACTGAAATTATAAAAAGTTGGTGGGTTACAGGTGTAAGTCATTCTTTAAATAATGACATGGCATATGTAATCTTCCTAAGCCATTCATCTTTAGACAACTTATATAGGTGGTGGCACCCAACTTTTTGAGTTGGGTAACGTAGTTGGCACCTAAAAAATTACAAATAATGATAAGAGAGTGATTTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAGGGGAGTGGGAAGGGGATGATCCAATTCCCTCTGATTCATATCATATATCATATATATTATATATTATACATCTATATCTCCAATTCATAACAAATATATCAAACATTTAAACTTGACATCTCCGATTTATAGCACATATATTCAACATTGAATCCTCATGTTAATGTTGCCATCAAGTACTTAATGTAAAATAAATTTAGTTGTCCCAAATCGATCTATATAAAGAAGAGTTTGTTCTTCCTATTCTTTCCCATCACCACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00319.21	SRF-TF	10	51	2.50E-18

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	MBTI5

Gene Ontology

GO term	Description	Category
GO:0000987	cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0046983	protein dimerization activity	Molecular Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function
GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR033897	MADS SRF-like

trEMBL

trEMBL term	Description
A0A2Z6LWA8	_

SwissProt

SwissProt term	Description
AGL80_ARATH	Agamous-like MADS-box protein AGL80

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G48670	AGAMOUS-like 80
Medicago sativa L.	MsG0380015210.01.T01	_
Oryza sativa L.	LOC_Os01g18420.1	OsMADS88 - MADS-box family gene with M-gamma type-box, expressed
Cucumis sativus L.	Csa001552	_
Glycyrrhiza uralensis Fisch.	Glyur000476s00022363.1	_
Codonopsis lanceolata	Cl_chr05_21410T	_
Arachis hypogaea L.	AH13G42040.1	Agamous-like MADS-box protein AGL80 like

Expression pattern