Gene detail

Detail information of Am03G022500.1 Annotation

Gene ID	Annotation
Am03G022500.1	Eukaryotic translation initiation factor 2 subunit 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G022500.1	mRNA	Chr03	66946393	66950042	-

Sequences

CDS:

>Am03G022500.1
ATGGCTCGGAATCTAGAATGTCGAATGTACGAAGCGAAGTACCCTGAAGTGGACATGGCGGTGATGATACAAGTGAAGAACATCGCCGATATGGGTGCATACGTCTCACTTCTTGAATACAACAACATCGAAGGTATGATCTTGTTTTCGGAGCTTTCTCGTCGTCGGATTCGTAGTGTTAGCAGTCTCATCAAGGTAGGGCGTATCGAACCTGTGATGGTTCTCCGTGTTGACAAAAACAAGGGTTACATCGATCTCAGTAAACGTAGGGTTTCTGAAGAAGACATTCAAGCTTGTGAAGAGAGGTATAACAAGAGTAAACTTGTTCACTCTATTATGCGTCACGTTGCTGAAACCTTGGACCTCGATTTAGAGGACTTGTATGTTCATATTGGATGGCCTTTATATCGCAAATATGGTCATGCTTTTGAGGCGTTCAAAATAATTGTGACTGATCCTGATACGGTTTTAAGCACTCTCACGCGTGAGGTTAAGGAAGTTGGCGCTGATGGAAAAGAGGTGGTTAAGGTGGTACCCGCTGTAACTGAGGAAGTGAAGGATTCTCTAGTGAAGAATATTAGAAGACGAATGACTCCCCAGCCTTTGAAAATTAGGGCAGATATTGAAATGAAATGCTTTCAATTTGATGGTGTTCTTCATATCAAGGAGGCAATGCGAAAAGCTGAAGCTGCTGGAAATGATGACTGCCCTGTGAAAATTAAACTTGTTGCTCCCCCACTTTATGTACTTACCACTCAAACCCTTGACAAGGAGCAAGGAATATTGGTTCTCAGCAAGGCCATTACTTGTTGCACTGAATCAATAGAACAACACAAGGGTAAACTTGTGGTGAAGGAGGCACCCAGAGCAGTGAGTGAACGTGATGATAAACTGCTTGCTGAGCATATGGCTAAGCTACGCCAAGATAATGAGGAGATCAGTGGCGATGAAGACAGCGAAGAGGAAGAAGATACAGGAATGGGTGATGTTGATGTGGACAATGGTTCTGCAATAACAGAGTGA

Protein:

Promoter(3k):

>AM03G022500.1
TTGTGGATCCACTGTACACAATGCATAATGTTTTCAATACTTACATTGTGGAGTTCCCACCCTTGCCAACTGAGACCTCATGGCCTGATTTCAATAGTATTGAACTACATCATGATCCAACTAAACGAAGAGATAAAAAGGGCCGTCCACAGTCTACCCGTATTCGTACAGAGATGGATCAAAGAGAAACGGGTACCCGCACCAAAAGATGCGGAATTTGTAGAAATGAGGGTCACAACAAAAATAACTGCCCTAACCGCAATGTCAACTAGTCACATTTACTACTACTGTTCTTTTCGTATTAGTCTTTTAAATCAATTCATGTCTTTTAATGTGACAGTTAAATTTATATTTTTTTTAAATAATTAAATTTAGTATAAATAAGTTTACTAATTATTCTAATTATTTAAATTAATTATTGTAATTAAATTAAATTAATTTATATATTAATCAAATTAAATATAAGAAATTTAAAAAATAAAAAAACGCAGGTCAGAACTCACCCTCGTGGGGGGCGAGTTCTGCACTAGAAATAAAAAAAAATTGCAACTTTTTAGTTTAGAAAGCTGGGTGGTGGGGGGCGAGTTCTCCACATAGAAAAAAAAGTGGGTTACTTTGGTATATAATGTAGAAAGTGTAGTATTTAGGTAAATTTTTTTATTTTTTGGTATGGAATGGTTTTTTTGCCCCAAATTAACCCCAAAAACCACCCGAGTTTGCAATACATGTTGTAGTGTCTTTCTTCCCCTTCTTTCCTTTTCAGACAGAGAGAGAGGAACCCTAAACTAGTTTTACTCTCCAGAGACCCATTTCCTCTACAATCCCATTTCCACATATTAAACCAGAGACCCATTTCAAATTACAATCTCATCTTCAACGCCTAACTTCAACCATTTTCCTCTAAAATCCAGAAACCCATTTTGCTCAAAATCAAAATCCATCCCCTTCAAGTTCTTGAAACCCATTTTCAGACCTGGTTTGAAAAAGATCCAACCTTTACCGGCAAGAGAAGGAAAGGGAATGGGTACGACGTCGTTTAGGGGTGAGGTTCATTCGTGTTGTTTTGATCTTCTCATTCTTGTTGTTTGAGATGTAGTGTGAGGTTAAATTGTGCTGTTATCTTGATCATAATCATCTCCAGATTCATGGGTGAGAGAAAGAGAGAAGAAAGAGGGGTTTATGATTCATGGGTGAGAAGAAGAAGGGTTTATGATTCATGGGTGAGAGAAAGAGAGACACTACAAGAAAATCGCGTATTACCGGCGGATTTTTTGAGCCGGTACATTTCCGGAGGAAATTTTGCATTTTCGGCGGATTTTTTCGTCGGTAAATTTCCGGCGGAAAAAATGGTATTTCCAGCGGATTTTTACATTACCGGCGGATTTCTTAAATTTTTTTTTTTAAAAAAATCCGCTGGAAATTCAAAAAAAACCGCCGGAAATGTACCGGCAGATTTTTAACATTTCCGGCGGATTTTGTTTAAAAATAATAATAAAAAATTTCAAAAAATCCACCGGAAATGTTAAAAATCTGCGGTAAATCCGCCGGAATGTTTTGAAATTCCTATAAATAAAACTTTCTCCTACACTCTTCTTATTCTCTCATTTCACTCTTTATTTTCTTATCACTTTCTCCTACGCTCTTCTATATTTCTTTTCTTCTTCCTTCTCATTCATTCTCACTTATTCATTCTTATTTCTTCTTTCTCATACACTTCAAACTTAATTAAATTTCTCTACATATCTCTTTTCTATATTTCCCATTTCTTCTTCCTTCTCACTTTTTCTTATTTCTTCATTCACATACTCTCATTTATTCTTATTCCTTATCACTTATTCATTCTTATTCTCTCCTATATTATTTTTTCATACTCTCTTTCATTCTTTTTTTTGACACAACTCTCTTTCATTCTTATTCATTCTAAATTCTCTATTACTTCTCATTCTATTCTATATAATTTTTTTCTAATATTCTATTTCATTTTTTTATTACTTCTTATATAATTAAAATATAAAATTTGAAAAAAAAAATTTAAAAAAATTAATTTTTTTTTAAAATCCGCCGGTAATTCAAAAAATCCGCCCGTAAATTTCCGGCGACATTTTCAGCGGATTTTTTGAATTACCGGCGGATTTTTTTAAAAAAATATTATTATTTTTTTAAAATCCGTCGGAAGAGCACATAATTTTTTTAAAAAAAATTATTTTTTTAAAATTAATTACCGGCGAATTTTTTTTTTAATAATTTTTCTGCCGGAAATTACTGGTGGATTTTTTCCGTCGGAAACCGTTACCTGCGTACGAATTTCCGGCAGAAAAAATCCGTGGGTAATGATCAATTTCCGGCGGATTTTGGCCTTTTCCGTCCGCGAATTTCTTGTAGTGAGAAGAAAGAGATTAGGGGATGGGAACGACGACCGGTTCAGATGAAGGGGTGTTTATGATTGATTTAGAGGATGAAAACCTTCATTTTGGAATTCAACTATTCAGCATAGCAATTTAAAATAAAGATTAATTAAAAATAATGATTTGGCAATACAACTCAGCACAAAAAAATTAGGAAAATAAAATGACAACTCAAAACTCTATTAGCTACGTCAGCGTTTTTTGTAACGTATGGTTAAGAAAAGGATTTTTTTTAAAAAAGTTGTTTTTACAGGATTTTTTTTTTAAAAAATTAGAGGGACTAAAATTAAAACACCGTCCGTGCACCAAAAATATATTTAAGCGGAAGAAAAATAAGAGCTATTTCTAATCGAGCCAACTAAGTAAATATTTGGGCCAAAGTTTGCGTAATCAACAGCCCAACAACATTGAAGATATGGTCCATCACATTGCACCTTCAAACAAAAAAACACATCACTTTGCGCCCTCTTCCCTTCGCTACTCACAGAAAACCCTCACTCACAGCCGCATCACCAGCGAGAGAATCAATCTTGATAAAACCTCCAAATCGGAGATTTTTCTGTGAGCCGTGGGAAGAAAGAAACAGCGAGAAGCT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07541.15	EIF_2_alpha	127	257	3.90E-41
PF00575.26	S1	15	89	2.80E-12

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0006413	translational initiation	Biological Process
GO:0033290	eukaryotic 48S preinitiation complex	Cellular Component
GO:0043022	ribosome binding	Molecular Function
GO:0003723	RNA binding	Molecular Function
GO:0005840	ribosome	Cellular Component

InterPro

InterPro term	Description
IPR024054	Translation initiation factor 2, alpha subunit, middle domain superfamily
IPR024055	Translation initiation factor 2, alpha subunit, C-terminal
IPR011488	Translation initiation factor 2, alpha subunit
IPR003029	S1 domain
IPR022967	RNA-binding domain, S1
IPR012340	Nucleic acid-binding, OB-fold
IPR044126	IF2a, S1-like domain

trEMBL

trEMBL term	Description
A0A371G1C5	_

SwissProt

SwissProt term	Description
IF2AH_ARATH	Eukaryotic translation initiation factor 2 subunit alpha homolog

KEGG

KO	Description	Enzyme
K03237	translation initiation factor 2 subunit 1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G40290	Eukaryotic translation initiation factor 2 subunit 1
Medicago sativa L.	MsG0380015511.01.T01	_
Oryza sativa L.	LOC_Os03g18510.1	expressed protein
Cucumis sativus L.	Csa007534	_
Glycyrrhiza uralensis Fisch.	Glyur000005s00001094.1	_
Codonopsis lanceolata	Cl_chr01_39720T	_
Arachis hypogaea L.	AH20G16110.1	Uncharacterized protein like

Expression pattern