Gene detail

Detail information of Am03G022400.1 Annotation

Gene ID	Annotation
Am03G022400.1	RP non-ATPase subunit 8A

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G022400.1	mRNA	Chr03	66628306	66631919	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM03G022400.1
TTGTTCTCTTTGTTTGACCAACATTCATCAGCAAAGTGGCCATACTTATCACAATTGAAACATTGGATTTTTCTCTTATCAAATTTCTCCTTTCCCTTTTGGTAATTCTTAGTCTTCTTACCACTTTGATTTGAAGACTCTCCCTTCTCTACACTCTGATCACTACTCTTCTTGTTCTTATTATCAAGCCATGCCTGTTTCTTACTCTTCCACTTGTTATTTTTCTAGTCAGACTGCTTGTTATTATTTGCTTTGTTCACATTCAAAGCCTTAAGTGCTTGTGCAGTGTCTTTCTCAGCATTTCTCTCAGTTAAGCGTAATTCACGTGCCTCTAAGTTACCTTGTAACTCATCTATTTTCATTGTACTAGTATCTTTGGATTGTTCTATAGCTACAACTATAAAATCAAACTGAGGAGTCAAAGATCTAAGTACCTTCTCTACAATTATCTGATCACTGATGGTTTCTCCACAAGTTTTCATCTCATTTGTCACTGTAATTACACGCGAAATGTAATCAGCAACCTTCTCACTATCTTTCATGTTCAGGTTCTCATACTGTTTGCGAAGAGACTGCAATTTCACCTTCTTCACCGTCGCATCGCCACCATAACACCTCACCAGAGTATCCCAAGCACCTTTCGCAGTAGTTGCCTCAGCGATCTTCTCAAAAACCTTCTGATCTACGCACTGATGAATGTAGAACAGAGCCTTCTGATCCTTCTTTCTCGTCTCTCGTTGAGCCTTCCTTTGAGCCTCCTTCGCATTCGCCGGTAGCGGTGTATAGCCTTCATTAACCAACTCAAGCACATCCTGAGCTCCAAACAGCACACACATTTGGATAGACCACCGGTTCCAGTTACTTCCATCAAACACCGGTAACTTCGTGTTGAATCCACCATTGCCTCCGTTCATGCTTGATCTCTGTGATTAACTCTCAAAACTCACCAACTCTCGTGTTTACCCTTCCTAGAGAATCAAAAATTGTGATTCTCTTCGATTTCGCACCTTCGATTCAATGTGAATCAAGAAAAACGAAATCACTCACGCCTCACGCACACTCGTGTTTCCCAAATCGAAACGAAAGCTCTAGATACCAATTTATTGTGGTGATCTGAGCATTTCTCTCATGCTCACACACACTCAAGGTTTATCACAGTGAAGATCCATGCAAGGGAATAAGAAAAGGAAAGTTGAAAAGTAAAGTTGTATGTAATATTGCTGAAACCGTGTAACCAAATACAGTGAATCCAAATTGGATACAGTTACTAATGTAAACGTAAATGAGAGTGTAATTAAATGAAATACAAATGCAAGTGAAACTATCTGTAAATGAAATTAACTATAGTGACCAATGTGAAATGTCCATTTTAGCCTTGAGTTACTCCACTAATAGTGTGTTCAATGAAATAGATGTGAGTTTGCCTTATTTTAGGTTTGAGGTTTGAATCTTGAGGATTCTCGATTAGCTCTCTAAACTTCATTTGTAAGCCTATGCTTTTTTTCGGATGCTTTCAAATATCTTGTGACTGTATGGAGCTTCAATCTCCATTTGAAAGCCCTTTCCCATTGGTATGTGTCGATGAGGTCAATCAATATCATTGGACATTTTCAAAGTTGGATTTCACTCTAAGGTTTCAATGGAAAAACCTTCGAGCTATGGTCAAAATATTTGAAGAAATTCAAGGACATGTACTTCTTCTTTCAGCCCATTATTAACAATGCTAAATATATTCTCTTGAAAATGAGCCAATTGGAGTATGAGGTGTACCCTGCTCCTTAAGGTTTGGTAATGATCACGTCGAACATGTTCTTCATGCATCAATTGTTACTTACCACACTGGTCCACAAAATCTGTGGCAACATGGTCGCCATATGAGCCGAGGACTGATGTGTCATACGAGCCGTTTGAGAACAAATCAAGCCCAATAACATCGTCTGTCACCTGCCTTGAAGGGAAATCTCACGTTCATGAGGAATCCCATTAGTAGTAGCATGATCCTGCTCGTGAGAAACCCCTTCAGTCACTTGATCCATAATATCAGGGACATGCTCTTGATGTCGATGTTACTCACGTTGTAACCTACAGGCCGACACAATCCGCCTTTTGTGACTTTCGTCACCCTAAATGGTCGTATGTTCCATACCTAATAAAAATGAACCATTCAAATACAATAATTCAAAAGAGTAGTAGTAGCATGGAAAATACTATATATAGAACCTATACTCTTGTCGTCTTGTTGACGAAAACACCCCTCAACAAGATAACGAGTATTATAAACAAAGGAACTAAGCCTTCATAACTCTCGTTAACAAGATAATAAGAGTTATGAACACGTTCCTTCATTATAATTTTTGTCACCTTGTTTACAAATGGTCTTCTCAACAAGCTGACGAGAGCTTGATAAGACCATTTGACGAGAGCTGAGAAGACCATTTGTAAACAAGGTGACAAGCAATTCAAATTTTCAAAGAACAAAAAAATAGGGTTCATGGTTTAGAACCTTGCATGGTTCGTCAACAAGGTGACAAGCAATTCAAATTTGCAAAGAACAAAAAAATAGGGTTCATGGTATACCTCGTCGGAGATGATGGTAGAGTGGGAGATGAGTAAGGAGGCAAAGAGCACAACAACAAAGGAGAGGGAGGGGCCCATGAGATGAAGGGACGGGAGGTGGGAGAGGTGAAGTGAAAGAGTTAGGGGTATTTTAGTGTTTTCAAAGGAGAGGGGGTGAAAATATTTAGGGGAGGTGGGGTTAACATTAAAAGCCTAGAAGCTTGCTTATTTGAACACATATTTGGGCCGTAAGATTAACAAGATCCAATTGCAGCCAGGTTTCGTATTCGTATCCAACACGAAAACAAAAAAGCAAAGAAAAAGAAAGGCAAAGTTGGGTGGAGAGTGGAGGCAAAGGCGAAAGGGAGAATTTAACTGAGGTCTGAGAAAGAAAACTGTTGATACTGAGAAAGGGAGAGAGTGAAATCTGAGTTTCGAACTACG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13012.9	MitMem_reg	174	285	6.60E-35
PF01398.24	JAB	14	124	3.30E-30

Gene family

Gene family	Subfamily
Ubiquitin Family	JAMM

Gene Ontology

GO term	Description	Category
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	Biological Process
GO:0008237	metallopeptidase activity	Molecular Function
GO:0003743	translation initiation factor activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0006413	translational initiation	Biological Process

InterPro

InterPro term	Description
IPR024969	Rpn11/EIF3F, C-terminal
IPR037518	MPN domain
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain
IPR033858	26S Proteasome non-ATPase regulatory subunit 7/8

trEMBL

trEMBL term	Description
A0A1S2YDH7	_

SwissProt

SwissProt term	Description
PSD7A_ARATH	26S proteasome non-ATPase regulatory subunit 7 homolog A

KEGG

KO	Description	Enzyme
K03038	26S proteasome regulatory subunit N8

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G05780	RP non-ATPase subunit 8A
Medicago sativa L.	MsG0380015444.01.T01	_
Oryza sativa L.	LOC_Os04g56646.1	MEE34, putative, expressed
Cucumis sativus L.	Csa004938	_
Glycyrrhiza uralensis Fisch.	Glyur000304s00027646.1	_
Codonopsis lanceolata	Cl_chr05_35520T	_
Arachis hypogaea L.	AH20G17500.1	26S proteasome non-ATPase regulatory subunit 7 homolog A like

Expression pattern