Gene detail

Detail information of Am03G021280.1 Annotation

Gene ID	Annotation
Am03G021280.1	peroxisomal ABC transporter 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G021280.1	mRNA	Chr03	62369319	62389743	+

Sequences

CDS:

>Am03G021280.1
ATGTCTTCCCTTCAGCTGTTGAAACTAACTCGGCATGGCCAAAGTTTTCTGGCTTCGAGGAGGAAAGCTCTACTTCTTGCATCTGGTATCTTAATTGCTGGTGGAACAGCTGCATATATGCAATCAAGGTCAAGAGTTAATAAACATGGATTATTTGACAATGGCAATGAGCACAACGGTGATAAAGAAGTCACAGACGAGGAGGTTACGAAGGTTTCTGGTGCCCTGAAAAATAAACAAAAGAAAGGGGGTTTGAAGTCACTTCAAGTCCTTACGGCAATTCTTCTATCCGAGATGGGCCGATTGGGTGTGAAGGATCTTTTAGCTTTAGTTGCCATAGTGGTGTTGCGAACTACTTTGAGTAACAGGCTCGCTAAGGTGCAAGGCTTCCTATTTCGTGCTGCTTTTCTTCGGCGTGTACCATTGTTTTTCCGGTTAATTTCAGAAAATATTCTTTTGTGCTTCCTCTTGTCAACCATTCATTCTACATCAAAGTACATAACAGGGACTTTGAGTCTTCATTTCAGAAAAACATTGACAAAGCTTATCCATTCCCACTATTTTGAGAACATGGTATATTACAAAATGTCACATGTTGATGGTCGGATAACTAACCCAGAGCAAAGAATTGCCAGTGATGTGCCAAAGTTCTGTTCAGAGTTGAGTGAAATTGTTCAAGATGATCTAATAGCCGTGACTGATGGACTTCTCTATACTTGGCGGCTGTGTTCGTATGCTAGCCCAAAATATGTCTTCTGGATATTGGCCTATGTACTTGGAGCTGGGGCTGCCATAAAAAACTTCTCGCCTTCATTTGGGAAACTCATGTCCAGAGAGCAGCAACTGGAAGGGGAGTATCGGCAGCTTCACTCACGATTAAGGACTCACTCAGAAAGTATAGCATTTTACGGTGGAGAGAGGAGAGAAGAAGCTCATATTCAACAGAAATTTAAGACCTTGGTTAGGCACATGAGTAGAGTGATACATGATCATTGGTGGTTTGGCATGATTCAGGACTTTTTATTGAAATACCTTGGTGCAACTGTTGCTGTTATTTTGATTATTGAACCTTTCTTTTCTGGTCATCTAAGGCCCGACAGTTCAACTTTAGGGCGTGCAGAGATGTTAAGCAATCTAAGATATCACACCAGTGTCATAATTTCCTTATTTCAGTCTCTAGGTACTCTTTCTATCAGTGCAAGACGGCTCAATCGTCTCAGTGGGTATGCTGATCGGATTTATGAGTTAATGTCTGTATCAAGGGAGCTAAGCTTGGTGGATGAGAAATCATCACTGCAAAGAAAAGGAAGTAGAAACTGCATAAGTGAAGCTAACTACATTGAATTTTCTAATGTCAAGGTTGTGACCCCCACTGGCAATATCTTGGTGGATGATCTGACCCTCAGGGTTGAGCCTGGCTCTAATCTTTTGATTACAGGTCCAAATGGCAGTGGAAAGAGCTCGCTTTTCCGGGTTCTAGGCGGTCTTTGGCCATTGATATCTGGGCATATTGTGAAACCTGGTGTTGGTTCTGATCTTAATAAGGAGATTTTCTATGTGCCACAAAGACCTTACACTGCTGTGGGAACACTTCGTGATCAATTGATTTATCCTCTCACTGCCAGTCAGGAGGTTGAACCACTAACAGATCATGGGATGGTGGAGCTATTAAAAAATGTTGACCTTGAATACCTGCTGGAACGTTACCCACCTGAAAAAGAAGTAAACTGGGGAGATGAACTTTCATTGGGTGAACAACAAAGATTGGGCATGGCTAGACTTTTCTACCATAAGCCTAAATTTGCCATTCTTGATGAGTGCACAAGTGCTGTCACTACTGATATGGAAGAACGGTTTTGTGCTAATGTTCGGGCCATGGGAACATCATGCATTACCATATCACATCGTCCAGCATTGGTTGCATTTCATGATGTGGTTTTATCCTTAGACGGTGAAGGAGGATGGAGTGTTCACTATAGAAGGGAGGACTCTTCTTCTGAAAGGGGGATTGATACAATGAAGGCAACAGAAACAAAACGACAAAGTGATGCAAAAGCAGTTCAACGGGCATTTTCCATGAGCAAAAAGGACTCTGCATTCTCAAATTCAAGGGCAGAGTCGTATATGGCAGAGGTGATATCTTCATCTCCATCTACGAGTCATACTATTTCCCCATCTACTGTTCCCCAACTCCGTGGTAGTACAAGGATATTGCCACTAAGGGTAGCTGCCATGGGCAAAGTATTGGTACCCACTGTATTTGATAAACAAGGTGCACAACTGCTTGCTGTTGCTCTTCTTGTTGTTTCAAGAACATGGGTCTCAGATCGTATTGCATCTCTAAATGGTACCACTGTGAAGTTTGTTTTGGAGCAGGATAAAGTCGCCTTTATTCGGTTAATTGGTATGAGTGTTCTTCAAAGTGCTGCATCTTCTTTCATTGCACCTTCTATAAGACACTTGACAGCCAGGCTGGCCCTTGGGTGGCGGATTCGTTTGACACAACATCTACTCAAAAACTACTTGAGAAGCAATGCGTTCTACAAGGTCTTCCACATGGCAAGCAAAAATATGGACGCAGATCAGAGGATAACTCAAGACTTGGAGAAGTTAACGACAGACTTGTCTGGACTGGTAACTGGAATGGTAAAGCCAACTGTGGATATTTTATGGTTCACATGGAGAATGAAGCTGTTAACTGGTCAAAGGGGAGTTGCCATACTTTATGTTTACATGTTGCTTGGCCTGGGATTTTTAAGAACTGTTACTCCTGATTTTGGTGATTTGGTAAGCCGTGAGCAACAACTTGAAGGAACCTTTAGGTTCATGCATGAGAGACTCCGCACTCATGCTGAATCCGTTGCATTCTTTGGAGGTGGTGCTCGAGAAAAAGCTATGGTTGAATCAAGATTCAGAGACCTTCTCACTCACTCCAAGTACCTTCTAAAAAAGAAGTGGCTGTTTGGTATATTGGACGATTTTATCACTAAGCAACTCCCTCATAATGTGACTTGGTTGCTAAGCTTGTTGTATGCTATGGAACACAAGGGAGACCGTGCAGCAATAAGTACTCAGGGTGAGCTGGCCCATGCATTGAGGTTCTTGGCATCTGTCGTTTCTCAAAGCTTTTTAGCTTTTGGTGACATTCTTGAATTGAATAGGAAGCTTGTAGAACTTTCTGGTGGTATTAATCGGATTTTTGAGCTTGAAGAGCTCCTAGATGCAGCACAGTCTGGGGACTTCATCAATGGTGGTGCTATACCTCCAGCGAGGAATTATCATTCTAAAGATGTTATTTCTTTTTCTAAGGTCAGTATTGTTACCCCTACTCAGAAGATGTTGGCCAGGGAGTTGACATGTGATGTTGAGCTCGGGGGAAGCCTGCTTGTTACCGGTCCAAATGGAAGCGGAAAAAGTTCCATTTTCAGAGTTCTTAGAGGACTTTGGCCAATTGGAAGTGGAAGACTCTCTAGACCATCTGAAGACGTGGATCAAGAGACTGGATCAGGTTGTGGCATCTTCTATGTTCCTCAGCGGCCATATACATGCCTAGGAACCCTGCGGGATCAAATCATATACCCTCTATCTCGCGAAGAAGCAGAGCGTAGAGCATTGAAGATGTATGGAAAAGGTGAAAAACATCCCGACACGATGAAGTTGTTGGACGGGCACTTGGAAGTTATCCTAGAGAATGTCCGGTTGAATTATCTTCTAGAAAGGGACAACAGCCGCTGGGATGCAAATCTAAATTGGGAAGACACTCTCTCTCTTGGAGAACAGCAGAGATTAGGCATGGCACGATTGTTCTTCCATAAGCCTAAATTTGGCATCCTGGACGAGTGTACTAACGCAACAAGTGTTGATGTTGAAGAACACCTATATGGGCTTGCAGAAAAAATGGGAATCACATTTATTACTTCCTCACAACGTCCTGCTTTAATACCATATCATTCTGTGGAATTGCGGCTGATTGACGGTGAGGGGAACTGGGAACTTCGTTTGATCAAGCAATGA

Protein:

>Am03G021280.1
MSSLQLLKLTRHGQSFLASRRKALLLASGILIAGGTAAYMQSRSRVNKHGLFDNGNEHNGDKEVTDEEVTKVSGALKNKQKKGGLKSLQVLTAILLSEMGRLGVKDLLALVAIVVLRTTLSNRLAKVQGFLFRAAFLRRVPLFFRLISENILLCFLLSTIHSTSKYITGTLSLHFRKTLTKLIHSHYFENMVYYKMSHVDGRITNPEQRIASDVPKFCSELSEIVQDDLIAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGAAIKNFSPSFGKLMSREQQLEGEYRQLHSRLRTHSESIAFYGGERREEAHIQQKFKTLVRHMSRVIHDHWWFGMIQDFLLKYLGATVAVILIIEPFFSGHLRPDSSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISARRLNRLSGYADRIYELMSVSRELSLVDEKSSLQRKGSRNCISEANYIEFSNVKVVTPTGNILVDDLTLRVEPGSNLLITGPNGSGKSSLFRVLGGLWPLISGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTASQEVEPLTDHGMVELLKNVDLEYLLERYPPEKEVNWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCANVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHYRREDSSSERGIDTMKATETKRQSDAKAVQRAFSMSKKDSAFSNSRAESYMAEVISSSPSTSHTISPSTVPQLRGSTRILPLRVAAMGKVLVPTVFDKQGAQLLAVALLVVSRTWVSDRIASLNGTTVKFVLEQDKVAFIRLIGMSVLQSAASSFIAPSIRHLTARLALGWRIRLTQHLLKNYLRSNAFYKVFHMASKNMDADQRITQDLEKLTTDLSGLVTGMVKPTVDILWFTWRMKLLTGQRGVAILYVYMLLGLGFLRTVTPDFGDLVSREQQLEGTFRFMHERLRTHAESVAFFGGGAREKAMVESRFRDLLTHSKYLLKKKWLFGILDDFITKQLPHNVTWLLSLLYAMEHKGDRAAISTQGELAHALRFLASVVSQSFLAFGDILELNRKLVELSGGINRIFELEELLDAAQSGDFINGGAIPPARNYHSKDVISFSKVSIVTPTQKMLARELTCDVELGGSLLVTGPNGSGKSSIFRVLRGLWPIGSGRLSRPSEDVDQETGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAERRALKMYGKGEKHPDTMKLLDGHLEVILENVRLNYLLERDNSRWDANLNWEDTLSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEHLYGLAEKMGITFITSSQRPALIPYHSVELRLIDGEGNWELRLIKQ*

Promoter(3k):

>AM03G021280.1
CCTCTCTCATCGAACAACTGAGATTTCGATTCCGTGCGTTCCTCTCTCATCGAACAGCTCAGATTTCGATTCTGTGCGTTCCTTTCTCATCGCATGGCTTCACTCACAGTTTGTTCCTTCTCTCTCACTGTAATATTTTGGTGTAGGAGGAGTAACTGATTTCGAGGGAGAGGAGGAGGGGAAGGAGAAGGGATAAGAACAATTTTTCTGGGTTGTTTTTTCCTAACTGATTTCGAGGGAGAGAGAAGATGGAAGAAGAAGAAGAAGAAGCAGATCCATTGATTCCGTTGATTGAAGATGGTGATGATGATGATGAGGGGGTGGGTGAGTGATTCTGGGTTTTGTTCTTCACTTTTTCTACTTCTTCCAGTAGATCTAACAAATCTATTATCCTTTTGTTTTTCCGGTTTTGAAGATGAAGATCTTTGGACCAAAAAAAAAATGAAGATCTGTATTTTTTCAGAAGAGGGGGAAAATATGGAAGAGCAAGAAAGAAGATGGAAGAAGAAGAGAGAAGGTTGAAGATGAAGATCCTAATTGGCTGCCACATCATCAAAACATAACGGTGTTAACACTAATATAACAGCAGGGACTTAACTAATAACGTTTGGTAATTGCAGGGACTATTTTAAAAATTTTGGAATTACAGGGACTAAACTGGATTTTCTTGACAATTGCAGGGACTAAAAGTACCTTTAAGCCTTTTGTTTATAAGTAAGTTTTAAAGGCTTACTATATACGACGATATCCAAAAAAACAAAAATGGTCAGATAAGTAAGTTTTAAAGGCTTACTATATATATATATATATATTACTATATACGACGATATCCAAACTAATCCCCTGTGATTCCAAACCAAACCCGTCAGCGTTGATATTGAATGCCATCGCCAACATAATAAGAGTCCAGAAACCCGACCCGATCACAAACTGTCCTTCTGAAATTGAAACTCTACTCGTTATCTCGCATCTCTCATATATTCCCAATCTCTCGCGGTATTTCTTCAAATCTCCAAAACCACGCAACTCAAGTTAAAGAGGTATACGATTCTCGTATGTATATGCTTCTTAAGCTTCTCATCAATTTCCACGCTACTCACTAGTTCCTCAATTCACCGCTTCGCACTCCAATATGAAATCTTCTTTCTTATCGCTCCATATTCGGTTTGCTAATTGATCTCTTGTTTAGTCAAATAATTGTAATTTTGTTGCAGATTCTGACTCCTAATTCCGATCGTTGTCGATGCCAACACATGTTTTCTCCTCGTACTGAGCTAGGATCTTGTGTTCAGCATGATGGAATATACTTTTTTTTACCGTGATGGAACATGGTTAACAGTTAACACTATCGACCTTTGACGGTTAGCCATCTCTGTCAACTTCGTACTATGTGATTAATAGTTTGTTATGTTTCTACATGATTTATACGTCATTATTAATTAGTGGTGTACTTGTAGGTGACTGACTAAATCGTGTAACTACCTTTTTTGTTTTGTTTTGGTTATGCTAAGTTGATTGTATACAGGCACTATATTGGTTCGGCAAATTTTCTAAAATTTAGGGTATGGGTACGGCATGATGTATTGTATAGCAATAAAGTGATTGAAATCATAAGAATACCCAAACCACTTAGTAACTAAACTGTTTAAGAATACTGAATACTCATGCAACATGGTTTGTTACCGTCTTGCTAGGCATAGGATAAATGACTCTGGCTGTTCCTTCAGTGGTGTGTTTGCTCTAACCTTAATTGAGCCCTTAAATAAACATTGACCGAAGGAGTGCACCAAAAAGAGTGTAAGAAGGAGGTCCCGGGTTCAACCCCCGGAAACTAACATTTCCCCCACCCCCACTAACATTGCCTATAAAAAAAAACATTGACAAGGCATTGGTTGGGTGTTTTTGTCGGTAGATTGGGACAATGTGCTGAACATGTAGTCAATGGATATTTATCCCCATGTCATGTTCTCAAACATTTTTTTTTTACTTTGAATGTTATATATTCTTTATTTTTTTTGCAAAATTGTTTATACATGTTCTCCATTAAGTGGTTGGCTAATTTCTAAGGGTATATTTGGTAGAAGAGAAAGAGGAAAGAGAGAGGAAGTGAAGAGAGAGTGACTTTCTATTGTTTTGTTTAGGAGAGAAATAGGATAGAAAGATAGGGAGGGGATTAGTTTAGTACTATTTAGTTTAGTACTAATTTACACTAAATGTGTGTTTGGTAGAAGAGAAAGAGGGAAGGCAAGAGAGAAAGAGAGAAGAGAGAGTGACATTCTATTGTTTGTTTACTAATCCCTCTTCCTCTCTCTTCCCTCTTCCTCTTCTACCAAACACACCCTAAGGGAAAATGATTTACGAGAACAAAAAAACCAATACAGTTGTATGACTTCCTTTATGTTTACATATTTGTGTGTGATCATTTACTCTTCATTATGGTGGAAAATGACAACCCAACTGAATGGTTCTCACCAAGAAGAAAAAGGATTGGGAAAGGGGAGCAAATATAATTATTATTAGGAAATTTGTTTTTGCGTCATCTTTTCCTGGCGAGGTCTTCCTACTTGGGGGCGGGGAGGGATAGTATGTCTCAAGAAATAGCTCTTGCAAGGAAACACTTGTCCTTTTGTTTCTAGTTGCAAAGTTGTAATTTTACAATTAAGCCATTTTTTTTGATAATATATGATTAAGCTTTTGAACTGGTGTGATTATGTTTTATATGCCCTTAGAGCACCATGTTCCATAGTTATTGGAGTTTTTGCATATCTACATTATATTCGCACAGTTTGACACAAAAATGTGACCCTCATTAATGCTGGGAGCATGGTGTGCCTAAAGCATGTTATTGCACCTAAAGATTTATAATTCCTGCAGTTCTGTTTGCTGATCTATCATTTTTGGATGGAATTTCATGTAAGCTAGATTTTCCTGCTCCCAACTGTAAGAGGAGCAACTACAACACTGCTGTTTTTTTGATAAGGAAGAGGTTGGTCTATTGCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF06472.18	ABC_membrane_2	91	359	1.10E-164
PF06472.18	ABC_membrane_2	747	1011	1.10E-164
PF00005.30	ABC_tran	464	609	1.60E-36
PF00005.30	ABC_tran	1117	1283	1.60E-36

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0006635	fatty acid beta-oxidation	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0010030	positive regulation of seed germination	Biological Process
GO:0015916	fatty-acyl-CoA transport	Biological Process
GO:0006744	ubiquinone biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR036640	ABC transporter type 1, transmembrane domain superfamily
IPR011527	ABC transporter type 1, transmembrane domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A1S3E7R0	_

SwissProt

SwissProt term	Description
AB1D_ARATH	ABC transporter D family member 1

KEGG

KO	Description	Enzyme
K25819	ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter	[EC: 7.6.2.4]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G39850	peroxisomal ABC transporter 1
Medicago sativa L.	MsG0380016307.01.T01	_
Oryza sativa L.	LOC_Os01g73530.2	ABC transporter, ATP-binding protein, putative, expressed
Cucumis sativus L.	Csa007690	_
Glycyrrhiza uralensis Fisch.	Glyur000904s00024071.1	_
Codonopsis lanceolata	Cl_chr07_31200T	_
Arachis hypogaea L.	AH10G09320.1	ABC transporter D family member 1 like

Expression pattern