Gene detail

Detail information of Am03G020640.1 Annotation

Gene ID	Annotation
Am03G020640.1	P-glycoprotein 17

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G020640.1	mRNA	Chr03	59388180	59395474	+

Sequences

CDS:

>Am03G020640.1
ATGGGGAAGAAAGGTGGGTTTTTTCGTTATGCTGATGGCGTTGACAAATTGCTATTGTTGTTTGGAACATTGGGTTGCGTTGGAGATGGTCTACAAACCCCTATTACTATGCTTGTCCTTGGTAGTCTGATAAATGATTATGCTCAAGGGTCTCAACATACTGTCTCCATTCACACCATCAACAAGAATGCACGATATTATCTTGCAGAAGGAGTATGTTGGACAAGAACAGCAGAAAGACAGACTTCCCGCATGAGAATTGAATATCTTAAATCAATCCTAAGGCAAGAAGTTGGTTTCTTTGACAAGCAAACTAACTCTTCCACAACCTTCCAAGTAATTAACACCATAACTTCTGATGCTCAAACAATCCAAGACACCATGGCTGATAAGGTGCCTAATTCTCTAGTTCACCTCTCAGCATTTTTTTCTAGTTTCATAGTAGCACTCTTCCTTTCTTGGAGACTAGCAGTAGCTGCATTTCCATTTTCAATTATGATGATCATACCAGCACTCATATTTGGGAAGGCTATGAAAGATTTGGGTGGTAGAATGAAGGATGCATTTGGAGTTGCTGGTAGTATAGCAGAACAAGCAATCTCATCGATTCACACTGTTTATTCCTATGTAGGTGAAAAGCAAACACTAAACAAGTTCAGTTCTGCTAATGAAAAATGTATGGAGCTTGGCATAAAGCAAGGTCAAACAAAGGGAGTGGTTATTGGAAGTATTGGATTGTTATATGCTACTTGGGCATTTCAATCTTGGGTTGGAAGCGTTCTTACTAGAACTAAAGGAGAAACAGGTGGCAAAGTGTTTTGTGCTGAAATATGTATCATTTGGGGTGGATTGTCTTTGATGAGTGCACTTCCAAATATGGCTTTCATATTAGAGTCAACAGTAGCTGCTACCCGGATTTTTGAGATGATTGATAGAAAGCCAACTATGAACTCTAACAAAGAAAAAAGAAGGATTGTAAAACATGTGAGGGGAGAGATTACATTTAAAGAGGTTGACTTTAGTTACCCTTCAAGGCCAGACACACTAATTCTCCAAGGACTCAATCTGAAGGTTCAAGCAGGTAAAACAGTAGGACTAGTTGGAGGGAGTGGTTCTGGAAAATCTACAATCATTTCCTTGCTTCAGAGGTTTTATGATCCTACAGGTGGGGAGATATTTCTTGATGGATGTGATATAAAGAGACTTCACCTTAAGTGGTTGAGGTCATTGATGGGACTGGTAAATCAAGAGCCAATTCTCTTTGCAACTTCCATAAAGGAGAATATTCTATTTGGCAAGGAAGAAGCTTCAATGGAAGATATTACAAGTGCAGCAAAGGCAGCAAATGCACATGATTTCATTATCAAACTTCCTAATGGATATGAAACTCAGGTAGGACAACTAGGAGCTCAATTGTCTGGAGGGCAAAAACAAAGGATTGCTATTGCAAGGGCTTTAGTAAGAGACCCCAAAATCCTACTACTTGATGAAGCCACTAGTGCATTGGATTCACAATCTGAAAGACTAGTACAAAATGCCCTTGACCTGGCTTCTAGAGGTAGGACAACAATCATCATAGCACATCGCCTATCGACAATCCGTAAGGCCGATTCAATAGTGGTTCTTCAACTTGGAAAGGTGGTTGAGTCTGGTTCTCACAATGAACTACTTCAACTAAACAATGGACAAGGAGGAACTTACAGCAAAATGCTACAATTACAACAAGCAACAAGTCAAAACGAAAATGCACTGCATCAAATAAACAAAAGCCCCCATGCAATGGAAAATCTAACAAGTCCAAATTCAAGTTGGAAAAATACACCAATTCATCATGCATTTAGCCACTCACAACCATTTAGCCCCATATATTCAATCAGTGTTATAGGATCCAGCTTTGATGACTACAGTAGTGAAAACATAGAAAAATCTTACAGTTCAAGTATCTCCTACTGGCGTTTACTACAAATGAATTCCCCTGAATGGAAGCATGCTTTGCTTGGTTGTTTAGGTGCCATTGGCTCAGGAATATGCCAACCATTTTATTCCTATTGCTTAGGAATAGTTGCTTCTGTCTACTTTATAACTGATTATTCTGTAATCAAATCACAAATCAGGTTATACTCATCCATCTTTTGTAGCATAGCTGTTGTCAATTTCATCTCAGGCCTTCTTCAACATTACAATTTTTCCATCATGGGAGAGCGTTTGCTAAAAAGGGTACGCGAGAATTTACTAGAGAAGGTGATGACCTTTGAGATAGGATGGTTTGACCAAGAGGAAAACACAAGTGCAGCAATCTGTGCACGTTTAGCAACTGAAGCCAACTTGAGTATGTCAGGGAAAGCACATAGTGCTCAGAGAGAAGCTAGTCAATTAGCAATGGAAGCTACTATCAATCACAGGACTATTGCTGCATTTTCATCTGAGAAAAGGATGCTAAATCTGTTTAGAATTGCAATGGATGGCCCTAAGAAGGAAAGCATTAAGCAATCTTGGATATCAGGTTCTATATTGTCTATCTCATACTTTATTACAACAGCATCTATAGCTTTGACTTTTTGGTATGGAGGTCGGTTATTGCATCAAGGATTAGTGGAATCAAAGAATCTTTTACAAGTTTTCCTTATTTTGATGGGAACTGGGAGACAAATTGCTGAGACAAGTAGCATGACTTCTGATATAGCTAAAAGTGGAAAAGCTATTAGTTCAGTATTTGCAATACTAGATAGGAAAAATGTGTTTTTCTCATACCCTGCAAGGCCAGATCAAATGATTCTCAAGGGTCTAAGTCTTGATATTGAAGCTGGGAAAACAGTTGCATTAGTGGGACAAAGTGGCTCAGGAAAATCCACTATCATTGGCTTAATTGAAAGATTTTATGACCCTATTAAGGGATCGATTTCCATTGACAATTGTGATGTCAAGGAACTTAGTTTGAGAAGTTTGAGATCACATATTGCTCTGGTGAGTCAGGAGCCTACCCTCTTTGCAGGAACCATACGTGATAACATTCTGTATGGGAAGGAGGATGCATCTGAGGGTGAAATAAGAAAGGCAGCGCGCCTTGCAAATGCTCATGAGTTCATAAGTTCAATGAGAGATGGATATGATAGTCAGTGTGGAGAAAGAGGAGTGCAACTATCAGGAGGGCAGAAGCAAAGGATAGCAATTGCTAGAGCAATAGTTAAGAATCCATCAATCCTTCTCTTAGATGAGGCAACAAGTGCACTAGACAGCACATCAGAGAACCTAGTACAGGAAGCATTGGAGAAAATGATGGTTGGAAGAACATGTGTAGTTATAGCACACCGTTTGTCAACAATACAAAGTGTTGACTCTATAGCTGTGATTAAAAATGGAAAGGTGGTGGAAAATGGATCACACTCAGAGTTGTTGAAAAATAGATCAAATGGAGCTTATTACTCTTTAATTAAGCTACAATGGGGTCACTCAACTTGA

Protein:

>Am03G020640.1
MGKKGGFFRYADGVDKLLLLFGTLGCVGDGLQTPITMLVLGSLINDYAQGSQHTVSIHTINKNARYYLAEGVCWTRTAERQTSRMRIEYLKSILRQEVGFFDKQTNSSTTFQVINTITSDAQTIQDTMADKVPNSLVHLSAFFSSFIVALFLSWRLAVAAFPFSIMMIIPALIFGKAMKDLGGRMKDAFGVAGSIAEQAISSIHTVYSYVGEKQTLNKFSSANEKCMELGIKQGQTKGVVIGSIGLLYATWAFQSWVGSVLTRTKGETGGKVFCAEICIIWGGLSLMSALPNMAFILESTVAATRIFEMIDRKPTMNSNKEKRRIVKHVRGEITFKEVDFSYPSRPDTLILQGLNLKVQAGKTVGLVGGSGSGKSTIISLLQRFYDPTGGEIFLDGCDIKRLHLKWLRSLMGLVNQEPILFATSIKENILFGKEEASMEDITSAAKAANAHDFIIKLPNGYETQVGQLGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDSQSERLVQNALDLASRGRTTIIIAHRLSTIRKADSIVVLQLGKVVESGSHNELLQLNNGQGGTYSKMLQLQQATSQNENALHQINKSPHAMENLTSPNSSWKNTPIHHAFSHSQPFSPIYSISVIGSSFDDYSSENIEKSYSSSISYWRLLQMNSPEWKHALLGCLGAIGSGICQPFYSYCLGIVASVYFITDYSVIKSQIRLYSSIFCSIAVVNFISGLLQHYNFSIMGERLLKRVRENLLEKVMTFEIGWFDQEENTSAAICARLATEANLSMSGKAHSAQREASQLAMEATINHRTIAAFSSEKRMLNLFRIAMDGPKKESIKQSWISGSILSISYFITTASIALTFWYGGRLLHQGLVESKNLLQVFLILMGTGRQIAETSSMTSDIAKSGKAISSVFAILDRKNVFFSYPARPDQMILKGLSLDIEAGKTVALVGQSGSGKSTIIGLIERFYDPIKGSISIDNCDVKELSLRSLRSHIALVSQEPTLFAGTIRDNILYGKEDASEGEIRKAARLANAHEFISSMRDGYDSQCGERGVQLSGGQKQRIAIARAIVKNPSILLLDEATSALDSTSENLVQEALEKMMVGRTCVVIAHRLSTIQSVDSIAVIKNGKVVENGSHSELLKNRSNGAYYSLIKLQWGHST*

Promoter(3k):

>AM03G020640.1
GTAAAGATTCTAGCAAGTTAACGTTTGGTAGATACCTTGGCAGGGTGGCTTTGTCCTATCACTCTGTTTTCACTTCTCAGTTGATGTTATAGAGTTGTTTTTTCTTGGTGGACATCAGCGTTTTATTTTCCCTGCAACATCAAATTCGTAATTATGTCTTTGGTTTTAGGCTCAAGAAATATATTCGAATCTGAATGAATCAGATCCTGTTTCTGGGTGTTTGTTTTAGAGATATAAAAAAGATTCTCAGGAATACAAGATAGAAAATATTTATTTTCTAGGAATCTTAAATACTAACCAAAAATGAAAGAAATATTGTGATTAACTGGTACTATAGTAATATTTTTTGGTATATATCAAGGTATCCACCGTCGAAGGCAATGACTAATCCCCTCGCTGGATTGGAGGCACTTTGAAGGGTGGGACAGCTGACCCAGAGATTTAAAGTTGCTCCATACCCAAGGCGATGATCGAACCCTCGACACTTGGTTAAGGGAGGATGAGCCCCAACCGCTCAACCACACATTTGGGTTAACGGTGGTACTATAGTAATATGAATATCAATACTTTTATACCACTTAGTTTTTTTTTTCTTTTTTTTTTTTTTGAGAAGCAAGACCACTTAGTTTATGTTACATCAATTTCTTTTTACTTTCAAAATAATTATTATTTTTAGAAAACAATTTTAACTATGTTTTTTATTCATTAAATATCTGTACTTATCACGAAATATAGAACTTAAAAAGCATGGGACCTCATTGTTGACTTCAATTAGTTTAATCATTAATGTCACATCTAGTTCAATAATTAATGTATATGAGTTCGTTTGATTTGCTAAAAAGTAAGGAACTGTACTAGACAATTACAGTTGTACACTGTTTGATTTGGAGAATGGTCATGCCACTGGACAAACCTGGGGACAACAGACTTGACAAAAACACAAATTCATGTACCTCACAAAACCACGGTACAACTTTCTGTCCACAAAAAATACCAAATACTATTTTTATTTATTACTCAATACTCAATAAAAATACCAAATACTATTTTATTTATTTATTACTCATCTTCTCATCTCATCTCATCTCATCTCATGACCTATCTCTCTTCTATCCTCTCTCCATCTCTTCTCACTCTCATTTTTATTTATAATTTTCTAATTATATTATAATATACATTATTTAAAATCCTTATGTACATCTTATAGGGAATTTTAGTAAATTTTACATTTTTTGTTTGTGTCGTCCATTGTCTATTAAACTACGATGCAAAAAGTTGTCTAATACTGTTTTGTTCCGTACTTACCTATTTACAAATCAAAGGGAACTTATATGATCTAAAAGATTGTACACAGTTTAGTGTATAAGACATGGTCTGATTAATGACAAATTGACAGTCGTAGTCCTAATATTTAATTGCAATTCGATAGGCTCAATAATCATAATTAGGGGGTATTAATCCTATACGTTGTCTTTCAGTCACGTCGTTTATGCGTGGACTAGAGCTGTCAATTTGGCCCACGTGGGCCAGCCCACCCTAGGCCCACATGGCCCATGGACCAAAAAGCCCATGGGCCAAAAAGCCCACCATCCTAAGGCCCCACATAGGCCCCAAGCCCATAAGGCCCATGTGGGCCCAGCCCCGCCCATAGGCCCTGAATATTTATTTTGCAAAAAATGACCCACTCAACTTTGATGGCCTAGTTTAGCCTATGGGCCCTGAATATTTATTTTGCAAATAATGACCCACTCTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGAGTGTGAGATAGTGATGATGATGGTTGTGGTGAGAGGGAGAAGGAGGTGGTGGTGAGTGAGGGAGAAGAGGAAGGGGGTGAAAGAATGAAAGTGGATGTGTAAATAGTGGAAAAATAGGTGGTGGTGGTGGTGGTGGTTGGTGAGAGGAAAAAGGAGGTGGTGGTTGTTGTGTGATGGTGGTGAGATGGAAAAGGAGGTGGTGGTGGTGGTGAGAGAGAAAAGAATGTGGTGGTTAGTCGAAGATGGTGGTGGTGGTTGTGGTGAAAGGGAAAATGAGGTTGTGGTGAGAGTGAAAGAGAAGAGGAAGAGGGTGAAAGAATGAAAGTAGATGTGTAAATAGTGGGAAAATAGGTGGTGGTGGTGGTGGTGGTGGTGGTGAGAGGAAAATGAAGGTGATGGTGGTGAGAGGGAAAATGAGGTGGTGGGGGTGAGTAGAAGATGGTGGTGGTGGTGGTGGTGGTGGGAGTGAGAGAGAAGAGGAAGTGGGTGAAAGAATGAAAGTAGAGGTATAAATAGTGGGAAAAGAGGTGGGGTGGTGGTGGCGAGAGGGATAAGGAGGTGGTGGTGGTGGGAGGGAAAATGAGGTGGTGGTGGTGAGTGGGAGATGGTGGTGGTGGTTGTGGTGAGAGGGAGAAGAATGTGGTGGTAAGAGGGAAGGAGAAGAGGAATGGGGGTGAAAGAATGAAAGTAGAGGTGTAAATAGAGGGAAAAAAATGAGAATAAAATTTGGGGGCCAGCCCATAAAGCCCTGGCCCCAACCCACTAAAAAATTTAAAAGTGTGGGCTGGGGCTAAAAAAAGCCCCATTAATAGGGGGCTTCAATTTTATGGGGCTTGATTGGGGGCCAATGGGGCTGGGCTTGGGGGCTTGGGCCAAATTGACACCTCTAGCGTGGACATTGTGATCAAACTGCAAAAGTAAACGCCAAATAAGACATAAGCAAGGAGAGTGCCTTGTTAAAACTCTAATGTCTCACAGTGTGACACAATTTGAAGAATACATGATTGATTACTTAGCAAAAGATGTGTCTGCCGGCCAATGTTAAAATCAAGTATGCAATGTAACACTTCCATTTGTCAATATATCATCAGAAAATTAATTAATTATATAATATATGATGCAAACAATAGCAAAGTATTAAGAAATAAGAAATTTCAAGCATATAAGTCATAATTACTTGTGCTGATTTGGGCATGCTGCTAGGAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00005.30	ABC_tran	351	500	6.10E-72
PF00005.30	ABC_tran	926	1075	6.10E-72
PF00664.26	ABC_membrane	30	264	1.50E-63
PF00664.26	ABC_membrane	666	775	1.50E-63
PF00664.26	ABC_membrane	783	877	1.50E-63

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0140359	ABC-type transporter activity	Molecular Function
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR039421	Type 1 protein exporter
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR036640	ABC transporter type 1, transmembrane domain superfamily
IPR011527	ABC transporter type 1, transmembrane domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A9D4WR09	_

SwissProt

SwissProt term	Description
AB17B_ARATH	ABC transporter B family member 17

KEGG

KO	Description	Enzyme
K05658	ATP-binding cassette, subfamily B (MDR/TAP), member 1	[EC: 7.6.2.2]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G28380	P-glycoprotein 17
Medicago sativa L.	MsG0380016251.01.T01	_
Oryza sativa L.	LOC_Os04g38570.1	multidrug resistance protein, putative, expressed
Cucumis sativus L.	Csa004711	_
Glycyrrhiza uralensis Fisch.	Glyur000242s00021046.1	_
Codonopsis lanceolata	Cl_chr01_23480T	_
Arachis hypogaea L.	AH10G08390.1	ABC transporter B family member 18 like

Expression pattern