Gene detail

Detail information of Am03G019110.1 Annotation

Gene ID	Annotation
Am03G019110.1	myb domain protein 5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G019110.1	mRNA	Chr03	54952946	54954289	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM03G019110.1
ATATATATGTAACATGTTATCTTAACATTAATGTGATATCTTGTCAAAGGGTGCCAGAGATCATGAGAAATATGAATTATCACTACAAAAAAAACACTGATTAGCGACGGAAATTAGCGAGGGACTTGTTGTCCCTCGCAAAAACAGTCATTAGCGAGGGAATTAGCGAGGGCATAAAGCTGTCAATTTTTTTGTCATTAGCGAGGGAATTAGCGAGGGAACTGTCCCTCGCTAATGACTGCCCTCGCTAATTCCCTCGCTAAATTTTGCTTTTTCAGATGATGGGACTCAGCGCAGGGGTTGGTAAAGGTGCAGAAATTAGCGAGGGACAGTTCCCTCGCTAATTCCCTCGCTAACGTTAACTTTTCAGATGATGAGACAGTTCCCTCGCTAATTCCCTCGCAATTTTTTTTCTTTTTTTCTTTATATCCGTTTACACCCTCACTCTTCTTTCTCACTCACTCACTCACTCACTCTTCACCATTCCTCTTCCCCCTTCCACTTCCTCTCACACCCTTCTTCTCTCTTCACTCTTCCAACACCACCACCACCACCATCATCACCACCTCCTCTCACACTCTTCTTCTCTCTTCACTCTTCCAACACCACCACCACCACATACCTCCTACCACTCTCACTCACTCTCTCTTACTCTTCACCACCACCAACCCACCACCCCACCACCACCACTCTCACTCTTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTACTCTTCTCCTTCTCTCTCTACTCTAAACCACCCATCACCACCACCACCACACCACCACCATGCCACCATTCAGCACTGGACACGTGTCATTTTTTTTTTGAAAACTACAGTCATTAGCGAGGGAATTAGCGAGGGCAAAAGCCGTCGCTAATTCCTGCGCATTTACCAACCCCTGCAACTGAGTCCCATCACCTGAAAAGCTGCAGTCATTAGCGAGGGAACTAGCGACGGCATAGTCCCTCGCTAATTAGCGAGGGATCCAACTTCCCTCGCTAATCCCATTTGCGAGGAGGGAATTAGCGAGGGAACCAGTCCCTCGCTAAGTCCCTCGCAAATGACCATTAGTGAGGGAATCAGGTCATTTTGCGAGGGATCTGTCCCTCGCTAATGACTAGTTTTTTTGTAGTGTATATACCCTTAAGCTAGCCTTTTCTTAATATGCAGAAGGTGTGCGTGCTGGATTCAAGGCAGCTTCCATTGCGTGTGTTGCCAGTACTGTGCCCACAGTAAGTAATTTTCATTTTAACTATTTGCTATAGATATTTATTAATCTTGTATTTCTTTTAGCCTCTGAGCTCTAATAATATGTTACCTTGTTTTCACTTTGTTTCTTGTTTTCAAAGTTCTGTATCTTTGGAAATTGGAAATAAAGCGAAAACAAAGTGGCATTTTTGAAATCAAAACTGAACAGAAAATGCTTTCTGAAACCAATGCATGAGTTATTATTTCTCCTCTAAGTTGACTGTTCTTGTGAAGTATTTGAATGCATATTAACACTGGTCCCTGGTTGGTGAACAGCAACCATTGCAGCATATTTCATTACAGCTGATAAAACTATCTTGGAATGTGCAAGAAAACATGCCAGGCTTGAAGACTCTCTGAGACACAATCGTGACACGGCTTCATCTTAGACACTGCTATAATCATTGTTTGTCTTGCCGAATGATTGTGCTACTTGTAATACTTGTAACCATGTTGCAACACGTTTCTATCTGTGCCTGTCTCAGATGGATTTGAAGGTGTATATTAAATAAAGTAGAATCCTTGAAATTATAACCCTGTGATATTTGATCCATTGCTGAATGTCCTTGTAATATCTGATTTTGTAGAGTGGATATTACTAAATTGCAAAGTTTTAGTTTCTAGTTTTGATTAAATTGGGCTTGAAATAGAATACTTGAAATTAGGCTAGTATGTATAGGGTATAACTAATAAACAGTATTTTGGATGTAATTTAATTTTTTTTTTTAATTTTTTTTAAAAATTTCCGACGGATTTGCGACGAAAATGTGTCAGCGTTTGCGACGACTTTGCCACGGATATTTCCGACGGATTTCCGACGACTTTGCGACGGAGACATTTGCGACGAAAAAATCCGTCGGAAACGTTTTCCGACGAGCGATTTTGCGACGACTTTTTGTCCGTCGGAAAGTTCGTCGGAAACGTCAATTTCCGACGAAAATCAGTGCGTTTCCGACGGATTTTGTCGTCGGAAATCGTCGATTTTCTTGTAGTGGCTGCACTTCACTCTGAGAAAAACTTGCTACCCACCCACACTATTGATTTAGTATCAACACTTGTGTTGTCCCAAATGAGATTGTTCCTGTCTTGCCAAATACTCCATAAAGTCATACACCAAGCAGTTTTGTTTTGTTCATAAAGAGCAACAAGAATTGAGAAAAGATAGCGCCAGTGTTATCATGCGTAGCAGCTTGGTCAGTAACAACCGTGAGAGTTTGAACTCTAGACCTCCTTGCAACTTTGGAACCCCTTCATGTCCCTTAGCTCGCCAACTAAGCTACCTTATTAGTTTAGTGATTTTTGGCCTTCTATTTTATTTTTTGATGATTTTGGTCAAATTTGACAATTTAATTTTTACAATTTTTAAATTACTTTTTTGTCCCCAAAAAATCATGGATTGTTCGCTATTGATCCCTCATTTAATTTTGGAGTCAAATAGTACCAAAAATGCATGATATTATTATTCAATCATCAAAAGTACAACTAAAAAAATTAAGAAAATAAGGATAAAAAATTGCCATATTAAAAAAGTGTTGTTGGCAATGGGATAGGCAGACGTGGATCTCAAAAGCGAGCCTTGGCGCGTGTAAGCGGATTCGAACAAAATACTCATTTATTGTAGTGATAGGGAGAGAAGAGATAGGTGATGTGCGTGATTATTAGGTTCCTCCACTTTTCTGTGTGCATATACATACACATAGACACTACACTGTCAATATTTAGAAACTGGAATTGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	44	91	6.70E-30
PF00249.34	Myb_DNA-binding	101	142	6.70E-30
PF13921.9	Myb_DNA-bind_6	47	105	7.40E-16
PF13921.9	Myb_DNA-bind_6	103	146	7.40E-16

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0000976	transcription cis-regulatory region binding	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0030154	cell differentiation	Biological Process
GO:0010597	green leaf volatile biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A8B8ML42	_

SwissProt

SwissProt term	Description
MYB5_ARATH	Transcription repressor MYB5

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G13540	myb domain protein 5
Medicago sativa L.	MsG0380016108.01.T01	_
Oryza sativa L.	LOC_Os01g50110.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa009573	_
Glycyrrhiza uralensis Fisch.	Glyur000125s00010046.1	_
Codonopsis lanceolata	Cl_chr04_48870T	_
Arachis hypogaea L.	AH06G22160.1	Transcription repressor MYB5 like

Expression pattern