| Gene ID | Annotation |
|---|---|
| Am03G019090.1 | RNA polymerase II transcription mediators |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G019090.1 | mRNA | Chr03 | 54882478 | 54913096 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF18296.4 | MID_MedPIWI | 1154 | 1269 | 6.60E-40 |
| PF18296.4 | MID_MedPIWI | 1273 | 1390 | 6.60E-40 |
| PF11597.11 | Med13_N | 2 | 341 | 6.50E-29 |
| PF06333.15 | Med13_C | 1545 | 1928 | 1.20E-15 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | MED13SUB1 |
| GO term | Description | Category |
|---|---|---|
| GO:0016592 | mediator complex | Cellular Component |
| GO:0003712 | transcription coregulator activity | Molecular Function |
| GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process |
| GO:0045893 | positive regulation of DNA-templated transcription | Biological Process |
| InterPro term | Description |
|---|---|
| IPR041285 | MID domain of medPIWI |
| IPR021643 | Mediator complex, subunit Med13, N-terminal |
| IPR009401 | Mediator complex subunit Med13, C-terminal |
| trEMBL term | Description |
|---|---|
| A0A1S3E7M3 | _ |
| SwissProt term | Description |
|---|---|
| MED13_ARATH | Mediator of RNA polymerase II transcription subunit 13 |
| KO | Description | Enzyme |
|---|---|---|
| K15164 | mediator of RNA polymerase II transcription subunit 13 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G55325 | RNA polymerase II transcription mediators |
| Medicago sativa L. | MsG0380016104.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g37500.1 | expressed protein |
| Cucumis sativus L. | Csa012902 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000125s00010049.1 | _ |
| Codonopsis lanceolata | Cl_chr08_32430T | _ |
| Arachis hypogaea L. | AH11G07880.1 | Mediator of RNA polymerase II transcription subunit 13 like |