Detail information of Am03G019090.1 Annotation
Gene IDAnnotation
Am03G019090.1 RNA polymerase II transcription mediators
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am03G019090.1mRNAChr035488247854913096-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF18296.4MID_MedPIWI115412696.60E-40
PF18296.4MID_MedPIWI127313906.60E-40
PF11597.11Med13_N23416.50E-29
PF06333.15Med13_C154519281.20E-15
Gene family
Gene familySubfamily
Epigenetic RegulatorsMED13SUB1

Gene Ontology
GO termDescriptionCategory
GO:0016592mediator complexCellular Component
GO:0003712transcription coregulator activityMolecular Function
GO:0006357regulation of transcription by RNA polymerase IIBiological Process
GO:0045893positive regulation of DNA-templated transcriptionBiological Process

InterPro
InterPro termDescription
IPR041285MID domain of medPIWI
IPR021643Mediator complex, subunit Med13, N-terminal
IPR009401Mediator complex subunit Med13, C-terminal

trEMBL
trEMBL termDescription
A0A1S3E7M3 _

SwissProt
SwissProt termDescription
MED13_ARATHMediator of RNA polymerase II transcription subunit 13

KEGG
KODescriptionEnzyme
K15164mediator of RNA polymerase II transcription subunit 13

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G55325 RNA polymerase II transcription mediators
Medicago sativa L.MsG0380016104.01.T01 _
Oryza sativa L.LOC_Os05g37500.1expressed protein
Cucumis sativus L.Csa012902 _
Glycyrrhiza uralensis Fisch.Glyur000125s00010049.1 _
Codonopsis lanceolataCl_chr08_32430T _
Arachis hypogaea L.AH11G07880.1Mediator of RNA polymerase II transcription subunit 13 like

Expression pattern