Gene detail

Detail information of Am03G019030.1 Annotation

Gene ID	Annotation
Am03G019030.1	Argonaute family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G019030.1	mRNA	Chr03	54740693	54751604	-

Sequences

CDS:

>Am03G019030.1
ATGGAAAATGCACTCGAGATCAAGGAAGCTGCATCGCCACCTGCTATACCTCCTCCACCTCCCGATGTGCTGCCTAATATGGATACAGAACTAATAGCTCCCACAAACTATTCTATTATCAGTAGACCCGGTGTTGGGACCACAGGAAAACAGATACCTTTGCTTGCCAATCTCTTCGAAGTTACAGCTGATACACCGGATGCAATTTTTTTCCAGTATAGTGTTACAATTACTTCGGAAGATAAAAGAGCTGTTGAAAGCAAGGGCATTGGGAGAAAACTGATTGATAGGCTTTACCAAATATACTCTTCTGAACTTGGGGCCAAAAGGTTTGCCTATGATGGAGAAAGAGCTTTATACACAGTTGGTCCTCTTCCACAAAAGAAATTTGAGTTTAAAGTATTGCTTGAAGAAGCATATGCAAAGTGTAATGCTGAGAGTCCTAGTGCTAATGGAAATGGAATCCATTTTGAGGAAACTAAACGGTCAAAGCATTCTCTTCAGTCAAAGGCATTCACAGTGGAGATAAGTTTTGCTGCTAAAATACCCCTGCAGTCCATTGCTCTTTCCCTCAAAGGGACTGGGTCAGATGCTGATTCTCAGGACACATTGAGAGTTCTTGATACTGTACTGAGGCAGCGAGCAGCTAACAGAGGGTGTCTCTTGGTAAGGCAATCTTTTTTCACTGATGACTCGAGGAATTATGCCGATGTTGGAGGTGGAGTAACACGAATTCAAGGTCTTCATTCCAGTTTTCGTCTTACACAGGGAGGATTGTCTCTCAGTATGGATGTGTCCACAACGATGATCTTAAAACCTGGACCTGTAATTGATTTTCTCCTGTCCAACCAGAATGTGAAGGAACCCCGTTATATTGACTGGGCAAAGGCCAAAAAAATGCTTCAAAGTTTAAGGGTACGTGCAACACATCTTAACCAGAAATTTAAAATTTCTGGCTTGAGTGACAAACCTTGCATTCAACTACTTTTTAGTATGAAGGTGAAAAATGGAGACACCGATAGCGCAGAGCAGACGGTGGATATTACTGTATATGAGTATTTCACTAAGCACCGTGGCATTGAGCTGACCTCTTCTGCTTATCTTCCTTGTCTTGATGTTGGGAAACCAAATCGGCCAAACTATTTGCCCTTGGAGCTATGTTCACTCGTTCCCCTTCAGCGGTATACAAAGGCACTATCTCCAATGCAAAGAGCATCTTTAGTTGAACAATCACGCCAGAAGCCTCAAGATAGAGTCAAAATGCTGACAGATGCCGTAGAAAATTGTTCGTGTGATGATGATCCTGTTCTTGCGGCATGTGGCATTTCTATTGACAAGCAAATGACTCAGGTTGAAGGCCGGGTTCTTGAGACACCAAAGTTGAAGGTTGGTAAGAACGAGGACTGCTTCCCGCAAAATGGAAGGTGGAACTTTAATAAGAAGACACTTCTGCAACCTTCACATATTGATTTTTGGGCTGTTGTCAATTTCTCTGCACCTTGTGATACTAGTTACATAACAAGGGAACTGATCAAATGTGGAATGAGCAAGGGCATTAATATTGAACGGCCATATACTTTAATAGAGGAAGAAGCACAGTTGAAAAAAGCTAACCCTGTTGCAAGGGTTGAAAAGATGTTTGACCTGATTACGTCTAAACTTACTAAAGAACCAAAGTTGATTCTTTGTGTCTTGCCAGAGAGGAAAAATTGTGACATCTATGGGCCTTGGAAAAAGAAGTGTCTGAGTGAGTTTGGTGTTATCACACAGTGCATTTCACCGGTCAAGGTCAAGATCACTGACCAATACCTAACTAATGTACTTCTCAAAATTAATTCAAAGCTTGGAGGAATAAATTCTTTGCTGGCGATAGAGCATTCTGGCCATCTTCCCTTGGTTAAAGATACCCCAACTATGATTTTAGGGATGGATGTCTCTCACGGATCCCCTGGTCGGTCAGATATTCCATCAATAGCAGCGGTTGTTGGATCGCGACAATGGCCTAGGATTTCACGGTATAGAGCATCCGTGAGAACACAATCATCTAAGGCGGAGATAATTGATGCTCTATACAAGCCTTTGGATGATGGAAATGATGATGGTATTATCAGGGAATTGCTTCTAGATTTCTATTTATCAAGTGATAAACGCAAACCTACGCAAATTATCGTCTTCAGGGATGGGGTTAGTGAATCACAATTTAAACAAGTTTTGGATATTGAGCTTAACCAGATAAAAAAGGCCTATAAACACCTTGATGGGGTTGATCTACCGAAGTTCACGGTAATTGTGGCACAGAAGAATCATCATACAAAGCTGTTTCAAGCTAATTCTCTGGAAAATGTTCCTCCTGGGACAGTTGTTGACAAAAAAATTGTGCATCCCAGAAATTACGATTTCTACATGTGTGCGCATGCGGGAATGATTGGAACCTCTAGGCCGGTACATTATCATGTGTTGCTTGATGAGATTGGTTTCTCTCCAGATGGCTTGCAAAATTTGATCCATTCGCTGTCTTATGTGAACCAAAGGAGCACATTCGCAACCTCAATTGTGGCACCTATAAGCTATGCCCACCATGCTGCAGCTCAGATGGGACAAATGCTGAATTTTGATGATTTGTCAGAAACATCTTCAAGTCTCACTTCGGAGGGAAACATCCCTATTCCAGAGCTTCCAAAGTTGCATGAGAATGTCAAGAGTAGCATGTTCTTCTGTTGA

Protein:

Promoter(3k):

>AM03G019030.1
TCTTGTTGGCACTCCCGTTGCCGATGTCGTTGTCAGTCTCTCGTTGCCGCTCCCGTTGCCACATATTTTCTCATTTTTTCTATATGATTTAATATTACAATTGTTAGTAGTTAAATTGATTGATTTTATTTATTACATGAAAATTGATTGATTTTAGTAGTTTTAATAGAGAGATTATAGTAAATAGTAAATTTTAAATTGTTTAATTATTGAGTGTGATATTAATTTAATAATTTATTTTTTTGGAATAAATAATTTTGAAACTATTGTTAGAGGTATGGTTTTTTTTGACAATTAGTAGTAGTTAAATTGATTAATTTTAGTAGTTTGAGTAAATTATAGAAATAGTTAAAAAACTATGTTTTTAGTAAAAAAAACTTACAAAAAAGTGATTTTTATGGAAAGAAAAACTGAAGAAAAAAAATGGAAAAAAACTGAAAAAAAGTTGGTTTTAAAATTTGCTGTTTTTTTGTCCTTTTGCTGCGTCAGTTGCAGCTTCTGATTGCAGTTTTCAATCAGTATTTTGTCCCTCACTTTTTTGTCCCTCTATCGTTGCCACTCCCGTTGGCGCTCTCGTTGCCACTCCCATTGGCGCTCTCGTTGCCACTCCCGTTGGCATTCCCGTTGACATTTTACTCTTTTTTAGTAATTATAAAATAGTTATTTGGTAATTTTTTGTAGTGGTTAAATTGATTAATTTTAACAAAAGTAGTTAAATTGATTAGTTTTAGTAGTTATTTTGTAATTTTTGGTAGGGTTAAAGTTTTTTTACTGTAGTGCACTGTAGAGTGACATAAGCGGTAGTGTAGCGCGTCAGAAACGTCACTGTAGCGCACTGTAGTGATACTGTAGCATTTTGTCTTTATGTGGTGAATTGGCTATTTTGCCCCTAAATTGTGACAAATGTCAAAATTTGGTGATGTCTAAAAATGTAAATGTGCTAGCATATGTTTTAATTATATAGAAAGTATTTTAAAAAATCAGTTTTTTTTTTTAAAAAATTTAATTAAAAAAAACTGTATTGGTACTGTAGCACGTCCGAAACGTCACTGTAGTGCACTGTAGAGTGACATAAGCGGTACTGTAGCGCGTCAGAAACGTGACTGACGCGCACTGTAGTGATACTGTAGCATTTTGTCTTTATGTGATGAATTGCCTATTTTGCCCCTAAATTGTGACAAATATCAAAATTTGGTGATGTCTAAAAATGTAAATGTGATTATATAGAAAGTAGATAGTGTAGATATGGTAATTTTTTTTGTTACACGCGCCCTCATTATGAATTATGAAGGAAGTGAGAGAACCCCTCCCCTGACTTCTTTTGCCAAATTTGCCCTCGCCGAACTTCAAAAAATAAACTATTTCAAAATTAGTACATAGATATTTTTGTCTTTTTATAATCAAACATACATATATCTTTTCTATTTTTCTTGTACCAAACAACTCTATATAATTTGTTTGGTTGTAGGGAGAGATTGAAAAGAGTGAAAGATGTGAGAATAGCGAAATAGGTAAGAAATATAGTAAATTTGATGTATAATTTTGCATAAGAGAAATAGACGATAAATAGAAGATAACAAAGTTTGTTTTAGATGATATCATTTATGAAAAGACAATTACCGTCTAACTAAAAAATAAAATGTGGAAACAAATGGGATTATAAGGTTTAACAAATGACAAATCGGTAAGAACAAACAAAAATTGGGATGTTTTCTTCCAGTTCTACGCATAATCACTAAAGAGATTGGGTTTTAGACATGGGGCCACACATATTTACTCTCGCCCCTATTTCAACCGGGCGAGGCTGATTAGACACTTCTATTCAAGTTCTTTCTCTAATCCACGCGACTTCTCTTGGTTGATATTTCACGCCAGAGTAAATCAATTCTATTTCTCACTCTTTTCTCTCTTTTCACCCTCACCCTTATTTTAGTCGGACAAGGCCGATTAGACACTCTTATGCAAGTTCTCCCTCCATGACTTCTCTCGACAATATTTCACACAAAACAAATAGAGACTAAATCTATTCTATTTCTCACCCATTTTTCTCTCTCTTCACTCCTACTTCTCAATTTTTTTCTCGTAAGTAACAACCAATCACACCATTAGTAATTTTAGAGGTAGGGTGGTGTCACTGAACTTGTAGCCAAGAAGTCAAAACTTTTCCCTCTCTTTTTAGGCTCCGTAGCTATGAAGTAGTAGGCCACGAACGGTGACTTCCATTTCGAAATTCAGCTATAGCTCCACGCCAACCACCAAAATCCTAAAACCCTACCGTACAACTGCGACCTCATTTCGGTATGATACCTTCTCTCTATCCATCCCATTTGATCTGAAATCTCATTATGTAGGAATTAGTGCTTTTTGTGTTTATATAAATGATATATCAGCTCGATTATAGTTTCGTAAATCAATTTCTATGAAAGGTATTGATTGCATGTTGTTATTTTCCGTGAGCTTTCAATGTTGGGGTTTTTCTCATTCCTTATTTGTTCTGCATTGTTCTTTTTTCTTAAATTAGAGTATTATTTTGACTGGTAGAACGTAAACCCACTGGTTCATCCCGGTTCTTTGAATGGGGAAGCTGATACACCGGATGCAATTTTCCACTTGATTTGGTCAGGAATGTATTGTTGAAAATGAAAATATATGGTCAAAATCAATTAGTACAATCTTTTTATTGCAGACAAGCATTTCTTCTTTTCTTCTGTTATTACTCCTGCTAATTATCATAATTGGTAAATGGCACTAACTTCTAGTGAAAAAAATACATCTAGGTCAGATAATGGTGTTTGATTGGCATGAACCTCTCTGCAATGACCGTGAGTTGCTTTGGAAAAGTACTACACAGTCATTTTTTAAAGTCTCTAGTATTTTAACATATCAATGAAAAATCATTTGAAATCATCACTTATATATTTGTATTTTGGCTGTCAAATACAGTCTTTCCTCTTTCCCGATTGATGTTTTGAAATGTCCTCTGTAGCTAAAGGAGAAAAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02171.20	Piwi	560	869	1.90E-103
PF02170.25	PAZ	277	407	4.20E-26
PF16486.8	ArgoN	50	211	8.30E-26
PF16488.8	ArgoL2	418	462	1.90E-12
PF08699.13	ArgoL1	223	270	7.60E-12

Gene family

Gene family	Subfamily
Epigenetic Regulators	AGO6

Gene Ontology

GO term	Description	Category
GO:0003743	translation initiation factor activity	Molecular Function
GO:0004527	exonuclease activity	Molecular Function
GO:0004386	helicase activity	Molecular Function
GO:0016441	post-transcriptional gene silencing	Biological Process
GO:0006413	translational initiation	Biological Process

InterPro

InterPro term	Description
IPR012337	Ribonuclease H-like superfamily
IPR036397	Ribonuclease H superfamily
IPR032474	Protein argonaute, N-terminal
IPR003165	Piwi domain
IPR036085	PAZ domain superfamily
IPR003100	PAZ domain
IPR045246	Argonaute-like, PIWI domain
IPR014811	Argonaute, linker 1 domain
IPR032472	Argonaute linker 2 domain

trEMBL

trEMBL term	Description
A0A8B8KMG8	_

SwissProt

SwissProt term	Description
AGO16_ORYSJ	Protein argonaute 16

KEGG

KO	Description	Enzyme
K11593	eukaryotic translation initiation factor 2C

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G32940	Argonaute family protein
Medicago sativa L.	MsG0680034841.01.T04	_
Oryza sativa L.	LOC_Os04g06770.2	argonaute, putative, expressed
Cucumis sativus L.	Csa007856	_
Glycyrrhiza uralensis Fisch.	Glyur000620s00017799.1	_
Codonopsis lanceolata	Cl_chr06_11680T	_
Arachis hypogaea L.	AH13G56230.1	Protein argonaute 16 like

Expression pattern