Gene detail

Detail information of Am03G017710.1 Annotation

Gene ID	Annotation
Am03G017710.1	chitin elicitor receptor kinase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G017710.1	mRNA	Chr03	50612336	50622807	+

Sequences

CDS:

>Am03G017710.1
ATGGAACAACCCAGATTCAGTTTCCTCATCCCTCTTCTTTGTTTGCTAGCTTCATTCCCTTTCAACGCAGAATCCAAATGCTCACGAGGCTGTTCACTAGCTCTAGCTTCTTACTACATGTGGAAAGGCTCTACCCTCACATATGTTTCAACTGTTATGTCATCTTCAATTCTCGCAAGACCAGAAGACATAGTCAATTACAACCAAGACACAATACCTAACAAAGACAGCGTTGAATCCGATATCAGAGTCAACGTTCCATTTCCCTGCGACTGCATCAACGGCGAATATCTCGCTCACACGTTTCAATACGATGTTCAGACCGGTGACACGTACGAGAAAATTGCTGCGAATAACTATGCTAATCTCACCAATGTTCAGTGGTTGAGAAAGTTCAATACATATCTGCCGGACAGTATTCCCGACACCGGAACGCTCAATGTTACCGTTAATTGTTCTTGTGGGAATGCTGAGGTGGATGATTATGGGTTGTTTGTGACATATCCTCTTAGGCCTGGTGAGACTCTGGGTACTGTGGCATCTTCAACCAAACTTGATAGCGGGTTGTTGCAGAGGTATAATCCTAGTGTCAATTTCAATCAAGGGAGTGGCCTTGTTTTTATCCCCGCCAAAGATCAGAATGGCAACTATGTGTTTTTAGGTTCCAGTTCAGGAGGTCTTGCTGGTGGGGCTATTGCTGGAATAGCTATTGGAATATTGGCTGTCCTTCTGTTATTGGCAGTTGCTGTATATTTTGGATATTTCCGCAAGAAGAGGATGCAGAAAGAGGAACTTTTTCCACGAGATTCTATTGCGCTCTTTTCTCAAAATGGGAAGGATCAAACTTCTCACAGTACTGCAAATGTATTATCACCAAGGCCTGGTGGTCCTGCTATCACCGGCATAACAGTGGACAAATCAGTAGAGTTCTCATTAGATGAACTAGCAGCTGCCTCGAATAACTTCAGCCTGGCTAATAAAATTGGTCAAGGTGGTTTTGGCTCTGTCTACTATGCGGAGCTGAGGGGAGAGAAAGCTGCAATTAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTGAAAGTTCTGACACGTGTTCATCATCTTAACCTGGTGCGGTTGATCGGATATAGTATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTGAGTCAACATTTACGTGGTTCAGGTAGAGATCCAATGCCATGGGCTACACGAGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGCCAGCAAATATATTGATAGACAAAAATTTCCGGGGGAAGGTTGCTGATTTTGGATTGACCAAACTGACAGAAGTTGGAAGCTCATCGCTTCCCACTGGTCGTCTTGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTCTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCGGCTAAGGAAGCAATCGTCAAGACAAGTGAATCTGTTGCTGATTCAAAGGGCCTTGTATCTTTGTTTGAAGGAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTCGCAAAATAATCGATCCAAGGCTTGGAGATAACTACCCTATTGATTCAGTTCGCAAGATGGCTCAACTAGCCAAAGCATGTACACAAGACAATCCTCAACTACGTCCAAGTATGAGATCCATTGTGGTTGCTCTTATGACACTTTCTTCAACTACCGACGAATGGGATGTTGGCTCCTTTTACGAAAATCAAAATCTCGTTAATCTTATGTCGGGAAGATAG

Protein:

Promoter(3k):

>AM03G017710.1
AATCTTGAAGTGGAGGTTTAATGGATGAAAATGGTGTCAAGTTTTTCTCCCATGCATGAACGTGGCTTCCTGTGCCTTTTACTGCCTTCTTATAGCTTGTCTCTTATAACACCTTGATCTAAAGATAAAATTCCTTCTACACTATTATTGTATGAATACTAATTTGAAAAGCTTCTTACAATTTCAAGTTGAATCCTCTTGAACTATCTCCTCATAAACACTACAACCTCTTACATCTTCTTAACAAAGTCTTTACCCTATCACAAGTGTATGAAGCCATTAATCACACACCTATCAGTATATCTTCTTACACTATCCAGATTCTAAGAAGACATTGTGGCTAGAGTTATTAAAAGTATTTGTATCTTCTTAGAGTAGTAACTTGCATCTCTCAAACCAACATCCAGATCTTCTCCGAAGCTAAACATCTTCCAATGTTCTTAACATTCTATTCTTGAGGAAGTTTGTTTGATATCCTCCTTGGCAATTAGGTTGGTCAAGGAATAAATTTTAAAAGGGTCACAATTCAAACCCCCCTTTCTTGTAGTTCTAGTTGACTTCAGCTAAAATTTGAAATCTAGGCTTGTACTTAATCGAATTTAAATGTATGTTGTGTTGATGTTTGAGCCACTACCTCATGCTTACTCCCGTCTTGGTACGTACCAATGATATTGGAGCCTAATGCCCAAGGGACCAAGGTATGAACAATTAGAGCAAGGAAAAAGTGTAGAAACACTTGAGGTGACCTATTTTCCAATATTTGCTAGGAACAAGACCTTGCTCCATCATGATGCACCTGGCGAAAGAGGGAAATATGTGCAACTTGAGAGATGACTTTTTGTCAAACCATTCGAGCGACCACCGGCAAAACTGACAGACTGGAGTTGTTCCATCCAATGGGTAGCAAGTTGGTTGATGGGTCTTGTAGAGGTTGATTGATTTTTTTGATAATTTGAATTGTAAAATCAGGAGCAATTTATGGGAAATAGACTGTCTACCTTGATGGCGGGTAAAGACACATACCTTTAGGTGATTTTAGGTATAAAAGAGGAGAGAGAATGTAGAAAAACGTGGAGGAAAATTAGGAGATAGAAACTGAGAGATGAGAGAGATAGAGACAATGACAGATGCCTTTTCCCGCCATCAAGGTAGACAATCCATACTCCAATTTATGCACTTCTGGTTTATCTTAGAAGTTTGCATAATCCTATACTAGCACTATATCCCCGGCAATCTAAGAAGCACAGATACTTAATACGATACAGATACGATATGGTATTGATACGGGGATACAAGGAATTTTTGAAAAATAAGATATGACACGACCAAGACACGTTAACAAAATTTTATACACAATGTTTGTAAAGAGATATTCATATTACTAGTTGTTCAATAACACATAAGTATATCATTAGTCAATATATGATGATCATATTGTAGAAATAAATACTTGTGATCATATCAAGTAGAGATAGTTAAGTATATTTATCCCACCCATATTACAATGTATTATTTCTTTTATGATTGTGTTACGAAAAAATATATAATTTTGTCTTTTAGTTATGAATTTTTTTTGTACCCCTCTATTATACCCTGTACCCCCCATAATTCATCAAACGGATGATTTTACCCCTGATTCCTCAAAAAAATTCCGGAAACACATAATTCTGGAACACATTTTTTGATTTCCGGAATTACGCCAAAACACATAAATCCGTAACACATTTTTTGACTTCCGGAATTATGTCGTTTGGGGTAATTCCGGAAATCTTTAAAAAAATGTGTTCCGGAATTACCTCAAAAGAGGATAATTCCGAAAAACTTTAGTTTCGAACTTTTTGGAATCACCTCAAAAATTGACTTCTGGAAATACCTCTTTTGAGGTGATTCCGGAAAGTTCTAAAAATTGGTTTTCGGAATTATCCTCTTTTGAGGTAATTCCGGAAAGTTTTAAATTTTTGAAGGGTATTTTGGGGATTAAATGGGTTATGGGGGTATCTTTAATACTTCTTACCTACAAAAAAAAAGCTTTTAGTTATTGAGGTATTAAAGATGCATCATAAATGAGTGACAATTGTGTGTTTAGTTTTTTTTGGGTAAACCCTCGGGTATCCACCGCACAGACAACAGTGACTAATCGCTAGCTCATTGTAGGTGCCTCGAGGGGCAGGACAGCTGGCCCAGAGTTTTAACGCTGCTAGGTACCCAAGGCGGGGATCGAACCCCCGACCATTAGTTAAGTGAGATTCAGCCCTAACCGCTGAACCCCACGCTCCTGGTTAATTGTGTGTTTAGTTGGTAAGAGGTATCAGAAATGTATCTGAGAAATATCTTTAGTAGATAAGAAGTATCTGAAAAATATCGAGTGAAATATTTTTAAAAGAAATTAAAAATTTATTGGATATTGAGTAGTTATCAAGAAGTATCATGTAGGTATCGATATTGGATACGTATAGATACATCTACGTTTCTGTTTGTGGCATTTGGTAATGATGAATGAAGCGATCACTTTTGAAAAGAAAAAAAAAAGAACTTTGTCCCAGTTACCGAAGTATCTTGCTGCGCCATAACTGAGAGCTCTCTCTCTCTCTCTCTATCCATGGCTCACCGCATGGGGTGTGACATTTGAGAAAGTCAATTGTAACAGGGGCGGGAATTTACTGTTAACCGTTGAGTCATCTACTCGGCTTACTGAGCCATTATAGAGATATGAAATGGTTAGGACTTAGGAGACGAACGGAACATACCGATATGGCCGACATGGCCTCTATTAAAAGTTAATCCAGAAAATAGTAAACAATTGCAGACTGGTTCAAACAGACAACTAGCCAACTCTGAATATTCTTTCCTCACTAAATTTTCATCCACCAGCCAAGTCAACTCAACTACACAAAACCCATATCAATAACATTTCTTTTCAAACTTCCCAACAAATCAAAACACACACCCAATTCCCTTCTCACAAAGGGCTTTTCTTTTTCCCCAAAATTTTCAATTTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	324	592	1.50E-44
PF00069.28	Pkinase	324	590	1.60E-44

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.1.3:RLK-Pelle_LysM
Carbohydrate-Active enzymes Family	CBM50

Gene Ontology

GO term	Description	Category
GO:0019199	transmembrane receptor protein kinase activity	Molecular Function
GO:0045087	innate immune response	Biological Process
GO:0005886	plasma membrane	Cellular Component
GO:0004674	protein serine/threonine kinase activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR044812	LysM domain receptor kinase CERK1/LYK3-like

trEMBL

trEMBL term	Description
G7J6P5	_

SwissProt

SwissProt term	Description
LYK3_MEDTR	LysM domain receptor-like kinase 3

KEGG

KO	Description	Enzyme
K13429	chitin elicitor receptor kinase 1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G21630	chitin elicitor receptor kinase 1
Medicago sativa L.	MsG0380015931.01.T01	_
Oryza sativa L.	LOC_Os08g42580.1	protein kinase domain containing protein, expressed
Cucumis sativus L.	Csa013548	_
Glycyrrhiza uralensis Fisch.	Glyur000704s00022931.1	_
Codonopsis lanceolata	Cl_chr04_19450T	_
Arachis hypogaea L.	AH14G01860.1	Uncharacterized protein like

Expression pattern